Myxocyprinus asiaticus (Chinese sucker): 127417585
Help
Entry
127417585 CDS
T08782
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi02010
ABC transporters
masi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127417585
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
127417585
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
masi02000
]
127417585
Transporters [BR:
masi02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
127417585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
127417585
NCBI-ProteinID:
XP_051513569
LinkDB
All DBs
Position
27:complement(8906788..8968395)
Genome browser
AA seq
2282 aa
AA seq
DB search
MSVSTQLGLLLWKNFTYRRRQTLQLLTEIVWPLFIFFILIAVRLNYPPYEQHECHFPNKA
MPSAGTLPWIQGIVCNANNPCFRHPTHGESPGVVGNFNDSIISRLFSDAKKILLYSQNDK
SLDGFKELISAVKVMQNNTAGFKLKDFLHENETLSRFLQQNASFSKHSVNNILEADVNLE
KVLIKGFGVHLRDMCSSTTLEDFVTISDKRVARFTQDIICNSSKTWLDQAETHFKSNLDF
FKPIRSDVRTNATDVRQVAKAMDNLLESLGSLAAELASMRSWSDLRKEILFLTLNATGSP
SLMYQAVSRIMCGHPEGGGLKIKSLNWYEDSNFQALFGSHNSSDEEPVSIYDNTSTPYCN
SLMKNMETSPISRMIWRALKPLLMGKILYTPHTPATQKIIHEVNKTFQELGILRDLGGMW
EETRTKIWNFMENSDEMDLLRTLLRNHATANFFSTQLAGTQWHVEDVISFLSKHSEDTRP
HGTAFTWRDVFNEADQAIMSISRFMECVNLDKLEPVWTEEKLVNESMSLLDNRKFWAGIV
FLDIQSNSSELPPHVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFSYLQ
DVIEHSIIRAITGTKEKTGVYIQQMPYPCYVDDIFLRIMSRSMPLFMTLAWMYSVAIIIK
SVVYEKEARLKETMRIMGLDNGILWFSWFISSLIPLLISAGLLVLLLKMGNLLPYSDPGV
VFLFLGSFAVVTIMQCFLISTAFARANLAAACGGIIYFTLYLPYVLCVAWQDYVGFSAKV
IASLLSPVAFGFGCEYFALFEEQGVGIQWNNLFSSPVEEDNYNLTTCLILMYFDACLYGI
MTWYIEAVFPGQYGIPRPWYFPLTKSYWFGESNTKNATIHGKKGNAGDICIEEEPTHLEL
GVYIENLVKVYHHGKKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTA
YIMGRDIRSELSSIRQSLGMCPQHNVLFSMLTVEEHIWFYARLKGLSEEKVKAEMEQILA
DTGLPHKRQSRTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLLKY
RAGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKKNTEPS
LSSCRNSSSTVSYIKKDDDASESSSDAGLGSDQESEATTAIGTCWPESPVVPVDVSLISS
LILKHVPAARMVEDLGHEITYVLPYESAKDGAFVELFHDLNDRLTDLGISSYGVSDTSLE
EIFLKVAEDSGVDTEILSDGTLPVRRHRRHAFGADHQSCLKPLTEDDDFDSNDSDADPES
KETDYLSVTDGKGSYQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIAL
VFSLIVPPFGKYPSLALNPWMYEEQFTFISDDAPHDTSTQKLLNALLDDPGFGTRCMEGE
PIPDAPCTMADEDWSAPEVPESVSDIFRMANWTMDNPSPACECSCDGKKKMLPECPAGAG
GLPPPQMKISETETLQNLTGRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGARST
QVLPPAEEFDDAISRVREIFQLGKNSGSAADRFLNSLSTFINGLDTKNNVKVWFNNKGWH
SIGAFLNVMNNGILRANLPPGKDPRTFGMTAFNHPLNLTKEQLSQVALMTTSVDVLVSIC
VIFAMSFVPASFVVFLIQERVNKAKHMQFISGVQPFLYWLANFLWDMCNYVVPATLVILI
FVCFQQKAYVSSTNLPVLALLLLLYGWSITPLMYPASFLFKIPSTAYVVLTSVNILIGIN
GSVSTFVMELFGNNEIGGINDILKNVLLIFPHFCLGRGLIDMVKNQAMADALERFGENRF
RSPLEWDMVGKNLFAMAVEGVVFFIITVLIQYRFFFKPKSLSAKLSPIGEEDEDVARERQ
RIMSGAGQGDILELRQLTKVYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLT
GDSVVTNGEAFLAGKSILREIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKE
VCEVAEWGIRKLGLVKYVDKKAGSYSGGNMRKLSTAISLIGAPPVVFLDEPTTGMDPKAR
RALWNCIHSVIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYT
IILRVAGPDPDLQPVMKFIESELPGSTLKEKHRNTLQYQLPSSLTSLAHIFSILAKNKEF
LRIEDYSVSQTTLDQVFVNFAKDQSDEHSDSSIRRKETVVNMALLSPLSIKDNMEKPIES
FV
NT seq
6849 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtctccactcagctgggtctgctgctgtggaagaacttcacctacagaaggaga
caaacactccagctgttgacggagatcgtgtggcctctatttattttcttcattttgatc
gctgtgaggttgaattacccaccatatgaacaacacgaatgtcactttcccaacaaagcc
atgccctcagcgggcaccctgccctggatccagggcattgtatgtaatgccaacaatccg
tgcttccgacaccccacccatggggaatctccgggagttgtcgggaacttcaacgattcc
ataatctcacgcctattttctgatgccaagaagatcttactgtacagtcaaaatgacaag
agtttagatggattcaaggaactcatcagtgctgtaaaagtcatgcaaaacaacaccgct
ggtttcaagctgaaggacttcctccatgaaaacgagaccctgtccagatttctccagcaa
aacgcctcattttccaagcattctgtaaacaatattctggaagctgatgtgaatctagaa
aaggtgctgatcaaaggttttggagtccatctgagagacatgtgtagctccaccacactt
gaggactttgtgaccatctcagacaagcgggtggctagattcactcaggacatcatatgc
aactcttctaaaacctggctggaccaggctgagacacacttcaaatccaacctggatttc
ttcaaacctattaggtcagatgtaaggactaatgccactgatgtccgacaagttgccaaa
gctatggacaaccttctggagagccttggatcactggctgcagagctggccagtatgagg
agctggagtgacctgcgaaaagagatcctgttcctgacactaaacgccactggctcaccc
agtctgatgtaccaggctgtgtcccgtatcatgtgtggacacccggaaggtggtggcctc
aaaattaaatccctcaactggtatgaagacagcaactttcaggcactgtttggcagccat
aatagcagtgatgaagaaccagtttcaatctatgacaacacctccactccatattgtaac
agcttgatgaagaacatggagaccagtcccatctctcgtatgatatggagagctttaaaa
ccccttctgatggggaagatcctctacactccacatacacctgcaacacagaagatcatc
catgaggtcaacaagacatttcaagagcttggtatccttagggatttaggtggaatgtgg
gaagaaaccagaacaaaaatttggaacttcatggagaacagtgatgaaatggatctactg
cggacgcttcttcgaaaccatgccactgctaatttctttagcacccagttggctgggact
cagtggcatgtggaggatgttatcagcttcctgtctaagcactctgaagacacacgtccc
catggaacggcatttacatggcgggatgtgttcaacgaggcagatcaagccattatgagc
atatcacgtttcatggagtgtgtgaacctggataaactggaacctgtgtggacagaggag
aaactagtgaatgagtccatgagtctgttggataacagaaagttctgggctggaattgtg
ttcctggacatacagtccaacagttcagaacttccaccacacgtcaattacaagatccgc
atggacattgataacgtggaacgcaccaacaagatcaaagatgggtattgggaccccggt
cccagggcagacccttttgaggatctgcgatacatttggggaggattttcttaccttcag
gatgttattgaacacagtattatcagggcaattactgggaccaaagagaagactggtgtc
tacattcaacagatgccttacccatgttatgttgatgacattttccttcgtattatgagt
cgttccatgccgctcttcatgactctggcctggatgtactcagtagccatcatcatcaaa
agtgttgtctatgagaaggaggctcgtctcaaggagaccatgaggatcatgggcttggac
aatgggatcctgtggttcagctggttcatcagcagcctcattcctctactgatcagtgca
ggcctactggttcttctactcaagatgggtaatctcctgccctatagtgaccctggggta
gtcttcctcttcctcggctcattcgcagtggtaaccatcatgcaatgcttcctgatcagt
acagcgtttgcacgtgccaatctggcagccgcctgcggaggtatcatctacttcactctc
tacctgccctatgtgctgtgcgtggcctggcaagactatgtgggcttctccgccaaagtc
atcgctagtttactgtctcctgtggcatttgggtttggctgtgagtattttgccctgttt
gaggagcagggtgtgggcattcagtggaataatctcttctccagccctgtggaagaggac
aactacaacctcaccacctgcctcatcctcatgtactttgatgcctgcctgtatggcatc
atgacctggtatatagaggctgtgtttccagggcagtatggtattcccaggccctggtac
ttcccactcactaaatcttattggtttggagagagcaacacaaagaatgccacaatacat
ggaaagaagggcaatgcaggagacatctgcattgaggaggaacctactcaccttgagctg
ggagtttacattgagaatctggtgaaggtttatcatcatggcaaaaagctggcggtcgat
ggattgacactgggcttctatgagggacagatcacctctttcctaggtcacaatggtgct
ggaaaaactaccaccatgtctattctcactggccttttccctccaacctctggcactgct
tatatcatgggcagagacatccgctcagagctgagctccatcagacagagtctgggaatg
tgtccacagcacaacgttctcttcagcatgttgacagtggaggagcacatctggttctac
gcccgtctgaagggcctgtctgaagagaaggtgaaggcagagatggagcagatcctggct
gacactggccttccacacaaacgccaatccaggacaagccagttgtcaggtggtatgcag
aggaagctctccgtggcacttgcgtttgttggagggtcaaaagtcgtcattttggatgag
ccaactgctggtgtagacccttacgctcgtcggggcatctgggaccttcttctgaagtat
cgtgcaggtcggacaatcattctttccacccatcatatggatgaagctgatatcctcggc
gatcgcattgccattatttcccatggaaagctttgctgcgtcggctcctctcttttcctg
aagactcaactgggaacaggatactatcttaccttggtgaagaaaaacacagaaccttct
cttagttcttgcaggaactcgagcagcactgtgtcctatattaagaaagatgatgatgca
tcagagagcagttcagatgcaggtttgggcagtgaccaagagagtgaagccaccacagcg
ataggaacttgttggcctgaatctcctgttgtccccgtcgacgtgtccctcatctccagt
ctaatcctgaaacatgttcctgctgcccgcatggtggaagacctcggtcatgagatcaca
tatgtgctgccgtatgaatctgctaaagatggtgcttttgttgaactcttccatgacctt
aatgaccggctcactgacctgggcatttcaagctatggtgtttcagataccagccttgaa
gagattttccttaaagtggcagaggacagtggagttgacacagagatcctctcagatggg
actctgcccgtgcgcagacacagacgacatgcatttggtgccgaccaccagagctgcctc
aaacccctgaccgaagacgatgactttgactccaacgactctgatgctgatccagaatcc
aaagagacagactatttgagtgttactgatggtaaaggatcataccaggtgaaaggatgg
agtttgaagaggcaacagtttgtggctttattgtggaaaagatttctatatgctcgccgg
tcaaggaaaggcttctttgcacagatcgtacttcccgctgtgtttgtgtgtatcgctctg
gtattcagtctaattgttccaccctttggaaaatatcccagtctggctctcaatccatgg
atgtatgaagaacagttcacgttcatcagtgatgatgctccacatgatacaagtacacaa
aaattactcaatgctttattagatgaccctggctttggaacacgatgcatggaaggagaa
ccgattcctgatgctccctgtacaatggctgatgaggactggtctgcaccagaggttcca
gagagtgtaagtgacattttcaggatggcaaactggaccatggacaacccatcacctgct
tgtgaatgcagctgtgatggtaagaagaagatgctcccagaatgccctgctggcgccggt
ggactgccacctccccagatgaagataagcgaaaccgaaaccctccaaaatctgacagga
cgaaacatctcagactatctagtgaagacctacgcccagatcattggcaaaagcttgaaa
aacaagatctgggtgaatgaattcaggtatggtggattttcattgggtgccagaagcact
caggtacttcctcctgctgaggagtttgatgatgccatctctcgagtcagggagatcttc
cagctggggaagaactcaggctcagcagcggaccgttttctgaacagtctgtccactttc
atcaatgggctggacactaagaataatgtcaaggtatggttcaataacaagggctggcac
agtattggagccttcctcaatgtcatgaataatggtatcttgcgtgccaacttaccacct
ggcaaagacccccgcacatttggcatgactgccttcaaccatccgctcaatctgaccaag
gagcagctttctcaagtggcactgatgactacctcagtggacgtgttggtttccatctgc
gtcatcttcgccatgtccttcgtccctgctagctttgttgtcttcctcattcaggagcgt
gtgaataaggctaagcatatgcagtttatcagtggagttcagccattcctctactggctg
gccaactttctctgggacatgtgcaattatgttgttcctgcaacactggtcatcctgatc
tttgtgtgcttccaacaaaaagcttacgtctcttccaccaacctacctgttcttgcccta
ttgctgcttctctatggatggtccattactcccctcatgtacccagcttcattcttattc
aaaatccccagcactgcttatgtggttctcactagcgtcaacatcctcattgggatcaat
ggcagtgtgtccacttttgtaatggaactgtttggaaataatgagattggtggcatcaac
gacatcctgaagaacgtgttgctgatcttcccccacttctgtctgggtcgaggtctcatc
gatatggtcaagaatcaggccatggctgatgccttggagagatttggcgaaaaccgtttt
cgttctccactcgagtgggacatggtgggcaagaatcttttcgccatggcagtggaagga
gtggtcttcttcatcatcacagtccttatccagtaccgattcttcttcaaacccaagtca
ttaagtgctaagttgagtccgattggagaagaagatgaggatgttgccagagagaggcaa
aggatcatgagtggagctggccaaggagacattctggaactccgtcaactcacaaaggtg
tacaagaggaaacagaagcctgctgttgatcgtctgtgtgtgggcattcctccaggagag
tgttttggtctgctcggtgttaatggagctggaaagacaagtacctttaaaatgctaacc
ggagactctgtggtcaccaatggagaagcattcttagcagggaagagtatactcagggag
atagatgaagtacatcagaacatgggctactgccctcagtttgatgccatcaacgacctg
ctaacaggacgggaacacctggagttctacgccatcctgcgcggtgtacctgagaaggaa
gtttgtgaggtggcagagtggggaatccgtaaactgggccttgtgaagtatgtggacaaa
aaagcaggaagctacagtggcggcaacatgcgcaaactctccactgccatttctctcata
ggagccccaccagtggtcttcctggacgagcccactactggcatggaccccaaggcacgg
cgggcattgtggaactgcattcacagcgtcatcaaggaggggcgctctgtcgtgcttacc
tcacacagtatggaggaatgtgaagcattgtgcactagaatggccatcatggtgaatggc
aggttccgctgtctggggagcgtccagcacctgaaaaacaggtttggtgatggatacacc
atcattctgagggtagcggggccagacccggacctacagcctgtgatgaagttcattgag
agcgagctgccgggcagcactctgaaagagaaacacagaaacacgctgcaataccagctt
ccctcctctctcacgtccctcgctcatatcttcagcatacttgccaagaacaaagagttt
ctcaggatagaggactactccgtgtcccagaccactctggaccaggtatttgttaacttt
gccaaggaccaaagtgacgaacattcagacagctccatacgtcgtaaagagacagtggtg
aacatggcgttactcagccctctgtctatcaaagacaacatggagaagccaatagaaagc
tttgtttga
DBGET
integrated database retrieval system
