Myxocyprinus asiaticus (Chinese sucker): 127417586
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Entry
127417586 CDS
T08782
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2-like
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03020
RNA polymerase
masi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
127417586
09124 Replication and repair
03420 Nucleotide excision repair
127417586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
masi03021
]
127417586
03400 DNA repair and recombination proteins [BR:
masi03400
]
127417586
Enzymes [BR:
masi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
127417586
Transcription machinery [BR:
masi03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
127417586
DNA repair and recombination proteins [BR:
masi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
127417586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
127417586
NCBI-ProteinID:
XP_051513570
LinkDB
All DBs
Position
27:10053103..10070081
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDQDEDIQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHTSGEVEEPPRFLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIIKDGEEQQQTQHQKTFIGKIPIMLRSTYCLLSGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSMM
ARGGQGVKKSAIGQRIVSTLPYIRQEVPIIIVFRALGFVSDRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKERRIKYAKEVLQKEVLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDVKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKRRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEIFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGEDVIIGKTVMLPENDDELDSTNCRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTVGHLIECLQGKVSANKGEIGDATPFNDAVNVQKVSNLLSEYGY
HLRGNEVLYNGFTGRKLTSQIFIGPTYYQRLKHMVDDKIHSRARGPVQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLKERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMTN
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtatgatcaagatgaagatatccaatatgatgaagatgatgatgaaatcaccccagat
ctgtggcaggaggcctgttggattgttatcagctcttacttcgacgagaaaggtttggtg
cgacagcagctggattcattcgatgagttcatccagatgtctgtgcagaggatcgtagag
gatgcaccacccatcgacctgcaggctgaggcccaacacacctctggagaagtggaggag
ccgccacggttcctgctgaagtttgagcagatctacctgtccaaacccacccactgggaa
agagatggcgccccctcacctatgatgccaaatgaggccagactccgaaatctcacgtac
tctgctcctctgtatgtggacatcactaagaccatcataaaggatggggaggagcaacaa
cagacgcagcatcagaaaacgttcatagggaaaattcccatcatgctccgctccacatac
tgcctcctgagtggcctgactgatcgtgatctctgtgagttgaatgagtgccctttggat
ccaggaggctacttcatcatcaatggttcagagaaggtcctgattgcacaagagaagatg
gctactaacacagtgtatgtgtttgctaagaaagactccaagtatgcttacaccggagag
tgcaggtcatgtctggagaactcatccagacccaccagcaccatctgggtcagcatgatg
gcccgaggaggacagggagtaaagaaaagcgccatcggccagaggattgtctccacactg
ccgtatattcggcaggaagtacccatcatcatcgttttccgagctttgggttttgtgtct
gatagagacatcctggaacacatcatctatgattttgatgatcctgagatgatggagatg
gtaaaaccatctttggatgaggcctttgtgattcaggaacagaatgtggctctgaacttc
attggctccagaggggccaaacctggtgtcaccaaagagaggagaatcaaatatgcaaaa
gaggttctacagaaggaggtgctgccacatgttggtgtatcagatttctgcgaaaccaag
aaagcatatttcctaggttatatggttcacagattactgttggctgccttgggcagacga
gagctggatgacagagatcactatggcaacaaaaggctcgatcttgctgggccactgctt
gcgttccttttcagaggaatgttcaagaacctgctgaaggagatcaggatatatgctcag
aagtttattgacagagggaaggactttaatcttgagctggccattaagactcgtattatt
tctgatgggctcaagtactctctggccacaggcaactggggggatgtgaagaaagcccat
caggccagagcaggtgtatctcaggtgttgaacaggttgaccttcgcctccaccctttcc
cacctgcgtcgtgtaaactctcctataggacgagacggcaagctggccaaacccaggcag
ctccataacacactgtggggtatggtgtgtcctgccgagaccccagagggtcatgctgta
ggtttggtgaagaatctagctctcatggcctacatctctgtgggatctcagccatccccc
atcctggagttcttggaggaatggagcatggagaacctggaagagatctcgcctgctgcc
attgcagatgcaacgaaaatctttgtgaacggctgttgggtgggtattcataaagatcct
gagcaactgatgaacactctgagaaaactgaggagacagatggacatcattgtgtctgag
gtatcaatgatcagagatattcgtgagagggagatcaggatctacacagacgctggccgg
atctgccgcccactgctcattgtagagaaacagaaactgctgctgaagagacgacacatt
gaccagctgaaggagagagagtataacaactacagttggcaggacctggtggccagcggt
gtggtagaatacattgatacactagaagaggagactgtgatgttggccatgacccccgat
gaccttcaagagaagggtgtagcttattgctccacttatacacattgtgagatccaccca
tccatgatcctgggcgtctgtgcctccattattcccttccctgatcacaaccagtctccc
agaaacacgtaccagtctgctatgggtaaacaagctatgggagtttacattaccaacttc
cacgtgcgtatggataccctggcccacgtgctatactatcctcagaagcccttagtcacc
acccgctccatggagtacctgcgcttcagagagctaccagcaggcatcaattctattgtg
gctattgcatcatatactggatacaaccaggaagactctgtcatcatgaaccgatcggcg
gtggatcgtggattcttcagatcagtgttctatcgttcttacaaggaacaagagtcgaag
aaaggctttgaccaggaagagatctttgagaaacccacccgagagacgtgtcaaggtatg
cgacatgccatctatgacaagttagatgatgatggattgattgctcctggtgtgcgtgta
tctggtgaggatgtgatcattggcaaaaccgtaatgcttcctgagaacgacgatgagctg
gatagcactaactgccgctacactaagagagactgcagcactttcctgcgcacaagcgaa
accggcatcgtggaccaagtcatggtcacgcttaaccaggagggctacaagttctgcaaa
atcagagtccgttcagttcgtattccacaaatcggagacaagtttgccagtcgacacggt
cagaagggtacttgcggtatccagtacagacaagaggacatgcctttcacatgtgaagga
atcacccctgacatcatcatcaatccccacgccatcccatccagaatgacagtcggccat
ttgatcgagtgtctgcaagggaaggtttccgctaacaaaggagagattggtgatgccacg
ccattcaacgatgctgtgaacgtacaaaaagtctccaacctcctgtcagaatatggctat
catctgagaggcaacgaggttttgtataatggtttcaccggccggaagctcacgtctcag
atcttcattggacccacttactaccagcgcttgaagcacatggtggacgataagatccat
tcgagagcacgcgggccagtccagatcctcaacagacagcccatggagggcagatcacgt
gacggtgggttacgttttggagaaatggaacgtgactgtcagatcgctcatggtgccgct
cagttcctaaaagagaggcttttcgaggcttctgatccataccaagtccacgtctgcaac
ctgtgtggcctcatggccatcgccaacacccgcacacacacctacgagtgcagaggatgc
cgtaacaagacacagatctctctggtcaggatgccatacgcctgtaagctcttattccag
gagctgatgtctatgagcatcgccccacggatgatgaccaactaa
DBGET
integrated database retrieval system
