KEGG   Myxocyprinus asiaticus (Chinese sucker): 127417603
Entry
127417603         CDS       T08782                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
masi  Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:masi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:masi03041]
    127417603
Spliceosome [BR:masi03041]
 Complex B
  Other components
   Complex B specific factors
    127417603
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 WD40_Prp19 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st WD40_Gbeta ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd LisH_TPL Beta-prop_EML NBCH_WD40 Beta-prop_ACSF4 Beta-prop_RIG_2nd Beta-prop_Nup120_160 Ge1_WD40 Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_VPS8 Beta-prop_Aladin Beta-prop_NWD2_C WD40_MABP1-WDR62_1st Beta-prop_WDR41 Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214 Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Beta-prop_BBS7 WD40_RFWD3 Beta-prop_DCAF12 DUF7165 Beta-prop_IP5PC_F TFIIIC_delta WD_LRWD1 Beta-prop_WDR75_2nd Beta-prop_NOL10_N VPS8_N PROPPIN LisH zf_topless LisH_PAC1
Other DBs
NCBI-GeneID: 127417603
NCBI-ProteinID: XP_051513602
LinkDB
Position
27:complement(9144180..9157372)
AA seq 513 aa
MSIEIESADVIRLIMQYLKENSLHRALATLQEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL
LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQSLKWQQHQGLLPP
GMTIDLFRGKAAVKDVEEERFPTQLNRHIKFGQKSHVECSRFSPDGQYMVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMSFSRDTEMLATGAQDGKIKVWKIQSGQCLR
RFERAHSKGVTCLSFSKDSTQILSASFDQTIRIHGLKSGKCLKEFRGHSSFVNEATLTPD
GHHVISASSDGTVKIWNVKTTECTSTFKSLGTSAGTDITVNNVILLPKNPEHFVVCNRSN
TVVIMNMQGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDFVLYCFSTVTGKLERTL
TVHEKDVIGIAHHPHQNLIATYSEDGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctattgaaatagaatcagcagacgtgatccgtctgatcatgcagtacctgaaggaa
aacagcttgcatcgggctttagcaacactccaggaggagacgacagtgtcactcaacaca
gtggacagtattgagagttttgtggctgatatcaacagcggtcactgggacactgtactg
caggctatacaatccctcaaactcccagacaagaccctcattgacctttatgaacaggtt
gttcttgagctgatcgagctgagagagttgggagcagccagatcgttgttgagacagacg
gaccccatgatcatgctgaaacaaactcaacctgagcgatacatccacctggagaatctc
ctggctcgctcgtattttgatcccagagaggcctaccctgatggcagcagtaaggaaaag
cgtagagcagctattgctcaggctcttgctggtgaggtcagcgtagtgccaccctcacgt
ctcatggccctgctcggacagtctctgaagtggcagcagcatcagggtcttctgcctcct
ggtatgaccattgatttgttcagaggtaaggcagcagtgaaggatgtagaggaagagcga
ttccccacacagctgaacagacacatcaagtttggtcagaagtctcatgttgagtgctcg
cgcttctctcctgatggtcagtatatggtcactggatctgttgatggatttattgaagtt
tggaacttcactactggaaaaatcagaaaggatctgaagtatcaggcgcaggataacttc
atgatgatggatgacgccgtgctgtgcatgtctttcagtcgagacactgagatgttggcc
acaggagctcaggacggcaaaattaaggtgtggaagatccagagcggtcagtgtctgcgg
cggtttgagcgcgctcacagtaaaggcgtcacctgtcttagcttcagtaaagacagcact
cagattctctctgcctcattcgaccagaccatcaggattcatgggctgaaatcaggcaag
tgtttgaaggagttcagaggtcattcttcatttgtgaacgaagccactcttactcctgac
ggccatcacgtcattagcgcctcttccgacggaactgtgaagatctggaacgtgaagacc
acagaatgcaccagcacgttcaagtctctgggtacctctgctggcacagacatcaccgtc
aacaatgtgatcttgctccccaaaaaccctgagcattttgtcgtgtgtaatcgatctaac
actgtcgtcatcatgaacatgcagggccagattgtaaggagtttcagctctggtaagaga
gagggaggtgattttgtgtgctgtactctgtctccgcgtggagagtggatctactgcgtc
ggagaagattttgtgctgtactgtttcagcacagtcacgggcaaactagagagaacccta
actgttcatgagaaggatgtaatcggtattgcccaccacccacaccagaatttgatcgcc
acatacagtgaggatggactcctcaaactctggaagccataa

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