Myxocyprinus asiaticus (Chinese sucker): 127417628
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Entry
127417628 CDS
T08782
Name
(RefSeq) collagen alpha-1(XXIII) chain-like
KO
K24355
collagen type XXIII alpha
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
masi00536
]
127417628
Glycosaminoglycan binding proteins [BR:
masi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
127417628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
127417628
NCBI-ProteinID:
XP_051513637
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All DBs
Position
27:8571573..8811022
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AA seq
604 aa
AA seq
DB search
MDSSEKINTEGKQNAPQTLYMRYLVSFPTMVCFVLSLSSIAVCFLMTFKTHQMESKLHAL
EIKMTDICQESSRAAADVSVSQDLQDSIKTLLKERLNEEMPKLRVARDVTQDCSCPPGPP
GKRGRRGDPGPPGKHGRDGYPGPLGLDGRPGPPGPKGSQGLPGPKGDKGDQGDTGPRMVF
PRYDHGYISADQPSFQRRILKGDQGQAGPPGPPGPPGAPGPRGPPGNTGKDGPRGPPGDP
GVAGQDGMEGQQGLPGKPGDVGEQGYPGPQGPPGSKGEPGPQGDRGTDGLPGLKGDKGDV
GEQGPQGEIGHPGEKGTSASGDIIDFNGKLLDAFQAIKTISVSGPPGPPGPPGPLGKEGP
KGELGLPGPAGVDGEKGDKGDSGEPGEPGEKGEKGEMGLSGPTGIDGQKGEKGDSILEDN
LVQMISQPGPPGPPGPPGSPGYMGHRGIPGPKGDPGENVKGEKGETGAPGIQGLQGLQGP
PGATGLVGLPGTKGEKGKQGEPGLDGFPGIKGDRGDRGERGEKGDRGPVGKRGLKGKKGE
QGPPGLDQPCPVGSDGCKREAVGMGHLAPEAPCPLGPDGLPIPGCWHKEQGMLQKLKRKH
LSQS
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggattcatctgagaaaataaatacagaaggcaaacagaatgctccgcaaactctctat
atgcgttatttagtgtctttcccaaccatggtgtgtttcgtcttatcgctgagttcaata
gcggtgtgttttctgatgacttttaaaacgcatcagatggagagcaaactgcacgcgctg
gagatcaagatgactgacatctgtcaagaatcatcgcgtgccgctgcagacgtctctgtt
tcacaggatctgcaggattcaattaaaacactcctgaaagagaggctgaatgaagagatg
ccgaagctgcgtgtggcgagagatgtgacacaagactgcagctgtcctccaggtccacct
gggaaacgtggaagaagaggtgaccctggacccccaggcaaacatggaagagacggttat
ccgggtccactcggtctggatggaagacctggtcctcctggacctaaaggaagccagggc
ctgccgggaccaaaaggagataagggtgaccagggagacactgggccaaggatggtcttt
ccccgatatgatcatggctacatctcggctgatcagcccagttttcagaggcgtattctg
aagggtgatcaaggtcaggctggcccaccaggacctccaggccctcctggagcacccggt
ccaagagggcccccagggaacactggaaaagatggtccccgtggcccaccgggagatcca
ggtgtcgctggtcaagatggaatggagggacaacaaggcttaccaggaaagccgggtgac
gttggtgaacaaggttacccaggaccacagggacctccaggatcaaagggagagccaggt
ccccaaggtgaccgaggaactgatggtctgccaggcttgaagggagataagggagatgtt
ggagaacaaggaccccagggagaaatagggcatcctggtgagaaaggcacatcagcatcg
ggtgacatcatcgactttaatggcaaactcttagatgcttttcaggccatcaaaaccatc
agtgtctcgggaccacctggccctcctggacccccgggaccactaggaaaagaagggcca
aagggtgaacttggcttgcctgggcctgctggggttgatggtgaaaagggtgataaagga
gactctggagagcctggtgaacctggagagaagggtgagaaaggggaaatgggcctctct
ggtcccactggaatagatgggcagaaaggagaaaaaggagactctatactagaggacaat
ctggttcagatgatttcacagccaggaccaccaggacctccaggtccacctggatctccc
ggatacatgggtcatcgtggcattccgggtccaaaaggtgatccaggggaaaatgttaaa
ggagaaaagggagaaaccggtgctccaggaattcaaggcctacagggtctgcaaggaccc
ccaggggcaacaggattggttggtcttcctggcacaaagggtgaaaagggaaaacaaggg
gaacctggattagatggttttcctgggattaaaggtgacaggggtgatcgtggggagaga
ggagagaagggagatcgcggccctgttggaaagagaggactcaagggaaagaaaggagaa
cagggaccccccggtctggaccagccctgtcccgtgggctctgatggatgtaaaagagag
gcagtgggaatggggcatttggcacctgaggccccctgcccgctgggtccagatgggctt
ccaataccaggctgctggcacaaggaacaagggatgcttcagaaactcaagaggaagcat
ctctcccagtcttga
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