Myxocyprinus asiaticus (Chinese sucker): 127417636
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Entry
127417636 CDS
T08782
Name
(RefSeq) protocadherin-18-like isoform X1
KO
K16499
protocadherin delta 2
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
masi04515
]
127417636
Cell adhesion molecules [BR:
masi04515
]
Cadherins
Protocadherins
127417636
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
127417636
NCBI-ProteinID:
XP_051513650
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Position
27:complement(19222169..19230451)
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AA seq
1161 aa
AA seq
DB search
MGTTKHSSEMNVLFCKTLLKLILFAAVTHNVSSKTLKYKVFEEQRVGMVIARLKEDVAGT
LSKLPSSVTPRFRAMQRGSTPLLSVRDEDGEISIATKIDREKLCEKNLNCTIEFDVITLP
TEYLQLFHIQVEVLDINDNAPQFSRAIIPIEISESASVGTRFPLDSAVDPDVGENALHTY
SLTRNNFFKIDIRTRTDGARYADLVVMRELDRETQSSYQLQLTASDSGVPQKSGSTLLKI
SISDSNDNSPAFDEQAYVVNLLENSALGTLLVDLNATDPDEGNNGKIVYSFSSHVPPKIL
ETFKINPENGHITLIKKVDYETTSSYEIDVQAQDMGPNSIPGHCKIIIKLVDVNDNKPKI
NINLMTQGKEEVAYISEASPVDTFIALVRVDDSDSGLNGEVVCRLHGHGHFRLQKTYENN
YMILTNVSLDREKRSEYSLTVIAEDCGSPSLSTIKHFTVQVQDENDNPPRFEKSRYEIFK
SENNSPGAYLTSVVATDPDLGSNGQVTYSIVDSQVQGSSISTYVTIDPSSGAVYALRSFD
REEVGQLSFTVQAQDGGDLVPLSSNATILLTILDENDNPPIIVSPLLSNHTVEVPLWRHA
ESGHLITIIKATDRDAGANSELTCSIIGGNDDGLFVIDPRRCELHTNGSVEASGREGFDL
AVLVQDRGASTQLSTRAILHISLRDYPESYSLNPSDLNNQSILDVSMIIIISLGAICGVL
LIVMVMFATRCSREQKDPRHSYNCRVAESTYQNHPKKPARQIHKGDITLVPTVNGTLPVR
AHPRSPSASPVPEGRQSHHSHQSLNSLVTISSSHVPENFALELAHATPPVEQVSQLLSIL
HQGQYQPRPSFRGNKYTRSYRYALNEMDKFSLKDSGRGDSEAGDSDCEMGRESPLLGEGF
SELFTPDGHHRLHPAMKLCTEECRVLGHSDQCWMPPLPSPASSDYRSNLYIPGEDPQKKA
TPEAPQSGDSTLRKKSFSTFGKENEEGEGEAGDGEDLCGTTSLLSEMHSVFQRLLPSSLD
TYSETNETEKTLACAADVGSLERRKGHLPGKPNPATYQQGVAVWAANTHFQNPGHGHAPA
SHMTALVAPLPAPLPAPMATSGCSSKWLPAMEEIPENHEEDELESVLGHLHGKRCDSRSE
IMDASELVAEINKLLQDVRQS
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgggaacaactaaacactccagcgaaatgaatgttctcttttgcaagacgctcctgaaa
ctcatactgtttgcggccgtgacgcacaatgtttcgagtaagactttaaaatacaaagtt
tttgaggaacagagagttggcatggtgatcgccagactgaaagaggacgtagccggcaca
ctatccaaacttccgagctccgtgaccccgcggttccgcgcaatgcagaggggcagcacc
ccgctactttcggtgcgcgatgaggacggcgagatcagcatcgcgaccaaaatcgaccgg
gagaaactctgcgagaaaaatttaaactgcactatcgagttcgacgtgatcactttaccc
acggaatacctccagctgtttcatattcaagtggaagtgcttgacatcaacgacaatgcg
ccgcagttctcacgcgccatcatccccatagagatctccgaaagcgcatcggtgggcacg
cgcttccctttggatagcgctgtggacccggacgtcggggaaaacgcgctacacacgtac
tcgctcacacggaataactttttcaaaattgatatcaggacgcgcacggatggcgcgcgg
tacgcggaccttgttgtgatgagggaactggacagggagacacagtccagctaccagctg
cagctcacagcctcagactctggcgtgccgcagaaatctggctcaactctgcttaaaatc
agcatatccgattccaacgataatagcccagcgtttgacgagcaggcttatgtggtcaat
ctactggaaaattcagcactagggacactgctggtggacctgaacgccacagacccagat
gaaggcaataacggcaaaatagtgtactctttcagtagtcacgtaccaccaaaaatcctg
gagacgtttaaaattaacccagaaaatggccacatcactctgattaagaaagtggactat
gagaccacttcctcatacgagattgatgtccaggctcaggatatgggtccaaattccatt
ccaggccactgtaagataatcatcaaactggttgatgtcaacgacaacaagccaaaaatc
aacatcaaccttatgacccagggcaaagaggaggtggcctacatctccgaagcatcccct
gttgatacttttatcgcattagtgcgtgtggatgacagcgactcaggtctaaatggagag
gttgtgtgccgtctccatggccatgggcattttcgcttgcagaagacctatgagaacaac
tacatgattcttactaatgtgtctctggaccgtgaaaagcgttctgagtatagcttgaca
gtgattgctgaagactgtggctcaccgagtctatccaccatcaaacacttcacggtgcag
gtgcaggacgaaaatgacaaccctccacgctttgaaaagagccggtatgagatcttcaag
tcagaaaacaattcgcctggagcatacctgacctcagtggtggccacagatccagatttg
ggctctaatggacaggtgacctactctattgtggatagccaggtccaagggagctctatt
tcaacatatgtaaccattgacccatccagcggggccgtgtatgcgctccggagctttgat
cgagaagaagtgggccagctctcgtttaccgtgcaggcacaggatggtggggacctggtt
cctttgagcagcaatgccaccattctgctcaccatattagatgaaaatgacaacccgccc
atcattgtttctccattgctgagcaaccacactgtggaggtgccattatggaggcatgcc
gagtctggtcatctgataacaattattaaggcgacggatcgtgatgcaggtgccaacagt
gagctgacttgctccatcattggtgggaatgatgatggacttttcgtcattgacccacgg
agatgtgagttacacaccaatggaagtgttgaggcctcaggccgtgagggatttgatctc
gcagtcctggtgcaagatagaggggcttctacacagctttcaacaagggccattctccat
attagcctgagggactatccagagagctactccctaaacccttctgacctaaacaaccaa
tccattctagatgtctctatgatcattatcatctcccttggtgcaatctgtggtgtgctt
ctcatcgtgatggtgatgttcgccacccggtgctcaagagagcagaaagacccaagacat
tcttacaactgcagagttgctgagtccacctaccaaaaccaccccaaaaaacctgcccgg
cagatccacaagggtgacattacattggtccctacagttaatgggacccttcctgtgagg
gctcatcctcgctccccttcagcctcacctgttccagagggccgccagagccaccacagc
caccaatcactgaacagccttgtcaccatctcctccagtcatgtgccagagaactttgca
ctcgaactagcccatgccacgccacctgttgagcaagtctcacagcttctgtccatactt
catcagggccagtaccaacccagacccagtttccgtggcaacaaatacacccggagctat
aggtatgctttgaatgagatggataagttcagcctgaaggacagtggacgaggggatagt
gaagcaggagacagtgactgcgagatgggtagggagtcccctctgcttggagaaggcttc
agtgaactctttactccagatggacatcaccgactgcatccagcaatgaagctgtgcacg
gaagagtgtcgtgtccttggtcattcggaccagtgctggatgcctccgctgccttcccca
gcatcctctgattatcgtagcaacctctacatccccggagaggatccccagaagaaagcc
acgcctgaagcaccacagtctggagattcaacattgaggaaaaagagtttctccaccttt
ggcaaggagaatgaggagggagagggggaggcaggtgatggggaagacctgtgtggaaca
acatctctgctgtctgaaatgcacagcgtgttccagaggctcctcccctcttcgttggac
acttacagtgagaccaatgaaactgaaaagacattggcctgtgctgcagatgtaggatcc
ctggaaagacgaaagggtcacctgcctggcaagccaaaccctgccacctaccagcagggc
gtcgccgtttgggccgctaatacacatttccaaaatcctggacatggtcatgcccctgct
agtcacatgacggcactggtggctccgcttcctgcccctctgccagctcccatggcaaca
tcaggttgctcctcaaaatggctgcctgcaatggaggaaatcccagagaatcacgaggaa
gatgagttagagtctgtgctgggtcatctacatggaaagcgctgtgacagtcgtagtgaa
attatggacgccagtgagctcgtagcagaaatcaacaaactccttcaagacgtcaggcag
agctaa
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