Myxocyprinus asiaticus (Chinese sucker): 127417637
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Entry
127417637 CDS
T08782
Name
(RefSeq) protocadherin-10-like isoform X1
KO
K16499
protocadherin delta 2
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
masi04515
]
127417637
Cell adhesion molecules [BR:
masi04515
]
Cadherins
Protocadherins
127417637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
TMEM154
Motif
Other DBs
NCBI-GeneID:
127417637
NCBI-ProteinID:
XP_051513652
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All DBs
Position
27:18048295..18068759
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AA seq
1034 aa
AA seq
DB search
MFVFLLLLCLADGVVSQIRYSVSEESEHGTFVGNIAEDLGLDLTKLSSRRFQVVPSSRTP
YLEVNLENGVLFVNEKIDRERICKQSTSCLLHLEVFLENPLELFRVEIEVVDINDNPPSF
PETDITVEISESATPGTRFPLESAFDPDVGSNALRTYDITNNNYFYLDVQTQTDGNKFAE
LVLEKPLDREQQATHRYVLTAVDGGQPPRTGTALLVVRVLDSNDNVPVFDQPVYSVNLAE
NAPVGTLVIQLNATDSDEGPNGEVIYSFSNHISNRVKELFDIDARTGRIEVRGEVDFEES
SLYQIYVQAKDMGPNAVPAHCKVLVKVADVNDNAPEIVFSTVTESVSENAATGTVIALIS
VTDQDSEENGQTHVEILGDVPFKLKTSFRNYYTIVTDGPLNRENVETYTVTVVARDKGVP
SQSTSKSMKVHVSDENDNAPTFTQPMYDVYVTENNVPGAYIYAVSAVDPDVGQNAYITYS
VVECEIQGMSVVTYVSINSENGYLYALRSFDYEQLKDFSFIVQARDSGSPELWSNATVNV
IIVDQNDNAPSVIAPLGKNGTAREPLPRSAEPGYLVTRIVAMDADDGENARLSYSIQRGN
ENGMFRMDWRTGELRTARRVSAKRDLQQLYELLIEVRDHGQPPMSCSAVVQVTLVESLVE
GHSGERGSAKAKDASLDLTLILIIALGSVSFIFLLAMIVLAVRCQKDKKLNIYSTCLASD
CCCLIGCGSCGSGGCCGRQARATRKKKKLSKSDIMLVQSTNTANVSVASAAQVPVEESGS
FGSLHQSQNYCYQVCLTPESAKTDLMFLKACSPSRSNDTEHNPCGAIVAGYTDQQQPDII
SNGSLLSSETKHQRAELSYLVDRPRRVNSSAFQEADIVSSKDSGHGDSEQGDSDHDAMHR
GHSSGADLFSNCTEECKALGHSDRCWMPSFVPTEARQGTDYRSNLHVPGMDSVPDSEVFE
GETLAGDQLFSTFGKETPHHPNQTHQHQHHQHQHHLNASTLERKEFDALLCNSRMPYKAA
CLCEYLEERAFCLS
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgtttttgctcctgttgtgtctcgctgatggggtagtttcgcagatccgttac
tctgtgtccgaggaatcggagcatggcacgtttgtgggaaatatcgcagaggatttggga
ctggaccttaccaaactttcatcccgccgctttcaggtggtgcccagctcgcggacgccg
tacctggaagtaaatttggagaatggggtgcttttcgtgaacgagaagattgaccgggag
cgcatctgtaagcagagcaccagctgtttgcttcacctggaagtgttccttgagaacccg
ctcgagctcttccgcgtggagatagaggtggtggacatcaacgacaacccgccgagcttc
ccggagacggacatcaccgtagaaatatccgagagcgcgacccctggcacgcgcttccct
ttggagagcgccttcgaccctgatgtcggtagtaacgcactgcgcacctacgacatcacc
aataacaactatttctacctagatgtgcaaactcagactgacggcaacaaattcgccgag
ctggttttggaaaagccactggatcgggaacaacaggcgacgcaccgttatgttctcact
gccgtggacggtggccagccacctcggaccgggacagctctgcttgtggttagggtgctc
gactccaatgacaacgtgcccgtgtttgatcagccggtgtactctgtgaacctggctgag
aacgcgcccgtgggcacgcttgttatccagcttaacgcgacagactctgatgagggcccg
aacggagaggtcatttactcattcagcaaccacatatcgaacagagtgaaggaactgttc
gatattgacgcaagaactggccggatagaggtcagaggtgaggtggactttgaggagagc
agcctgtatcagatttacgttcaagcgaaagacatgggacctaatgctgtgcccgcgcat
tgtaaagttttagtaaaagtggcagatgtgaatgacaacgcgccagagattgtcttcagc
accgtcacggagtccgttagtgagaacgcagccacgggcaccgtcatcgcgctgatcagt
gtcaccgatcaagactctgaggagaacggccagactcatgtggagattctcggcgacgtt
ccttttaaactcaaaacctcgttccgaaattattacactattgtcaccgacggtcctcta
aaccgagagaatgtagagacgtacactgtcactgtggttgcgcgggataaaggagttcca
tctcaatcgaccagcaaatcaatgaaagtgcacgtgtccgatgagaatgacaacgcgccc
acgtttacgcagccaatgtatgatgtgtatgtgactgaaaacaacgtccccggtgcttat
atttacgctgtcagtgccgttgaccctgacgtcggacagaatgcttatataacttactca
gtagtggagtgtgagatccagggtatgtccgtggtcacttacgtgtcaatcaattcggag
aatgggtatctttacgccctcagatcctttgattatgagcaactaaaagactttagcttc
attgttcaagccagagactcgggaagccctgaactgtggtccaacgccacagtaaatgta
attatagtggatcagaacgataacgcgccgtctgtgattgcgcctcttggaaaaaatggc
actgcgcgggagcctttgccgcgctctgccgaaccaggctacttggtgacgcgcattgtc
gccatggatgcagatgatggagagaacgcgaggttgtcctatagtatacagcgaggtaat
gagaatggcatgttccgaatggactggcgcaccggggagttgcgcacggcccgccgggtg
tcagccaaacgagacctgcaacagctttatgagctgttgattgaggtgagagatcacggg
cagcctcccatgtcctgcagcgcggtggtgcaggtgacactcgtggaaagtctcgtggag
ggccacagtggagagcgcggctcggccaaggccaaagacgcgtctctggacttgacactc
attctcatcatagcgcttggctctgtctcctttattttcctcctggccatgattgtgctg
gccgtgcgctgtcagaaggacaaaaagctgaatatttacagcacttgtctggcgagcgac
tgctgctgccttataggctgtgggtcgtgcgggtcaggcggctgctgcgggcgtcaagcc
cgggctacccgaaaaaagaagaaactaagcaagtcggacatcatgctggtccagagcacc
aatacagccaacgtgagcgtggcgagcgctgcgcaggtgcccgtggaggaatcggggagc
ttcggttcgcttcatcagagccaaaactattgttaccaagtctgcctgaccccagaatcg
gccaaaacggacctgatgttcctgaaggcctgtagcccgtcccgcagcaatgacaccgag
cacaacccgtgcggagccatagtggcaggctatactgaccaacagcaacctgacatcata
tcaaacggcagcctgctctccagtgagacaaaacaccagagagcagagctaagttacttg
gtggaccgaccaaggcgcgttaacagctcagcgttccaagaggcggatatcgtgagctca
aaagacagtggtcatggagacagcgagcagggagacagtgaccatgacgccatgcatcgc
gggcattcctctggagcagacctgttctccaactgcacggaggagtgtaaggccctcggc
cactcagatcgctgctggatgccaagttttgtgcccaccgaggctcggcagggcaccgat
taccgcagcaacctgcatgtgccaggcatggactcggtacccgactctgaggtatttgag
ggcgagacgctggcgggcgatcagttattctccacctttggcaaagagacgccacaccac
cccaaccagacgcaccaacatcaacaccaccaacatcaacaccacctcaatgcctccaca
ctagagaggaaagagttcgatgcacttctgtgtaactcgcgcatgccttacaaagccgcc
tgtctgtgtgagtatcttgaagagagagctttctgtctctcttga
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