Myxocyprinus asiaticus (Chinese sucker): 127417735
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Entry
127417735 CDS
T08782
Name
(RefSeq) pre-mRNA-processing factor 39-like isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
masi03041
]
127417735
Spliceosome [BR:
masi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
127417735
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
TPR_19
HAT_Syf1_CNRKL1_C
TPR_15
TPR_16
TPR_11
TPR_17
TPR_12
HrpB1_HrpK
DUF5858
Motif
Other DBs
NCBI-GeneID:
127417735
NCBI-ProteinID:
XP_051513881
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All DBs
Position
27:15762015..15774419
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AA seq
711 aa
AA seq
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MAAEGTDDLSNNGHLTNPSGLYDPEVAELPKSDVVGSEESGDGGDTSAPTASYTAEGEEE
EEGELPADFERLWKLTSDNPLDFNSWTDLLQYCEQEGHMRACRQSLNAFLARYPLCYGYW
KKFADLERRAGHNNKAEKVCEQGLKAIPLSVDLWIHYVNLLLGTLNMNLPESAQRIRCVF
EEAVAAAGWDFHSDRLWDLYAEWEKEQGNLKAMTVVYDRVLRVPTQFYNMHYEKLKTHLT
SHPPHDVLSPEEYRKVRAEYKQSQIQAKKERTDIAADEEERPPGEEEPADNGKDSEEAVQ
KMQELLLASREEVYQQNEAEVRKRWNFEDAIKRPYFHVKPLDRAQLKAWQSYLDWEMAEA
ETAEMDVERTSVEGQESSKKVCVAGHERVLILFERCLIACALYEEFWDKYVHYLEPRCLE
EVRNVYRRACEIHLPYKHSIHLQWSSFEEKHGNILEAQRILESLEMTLPGLAAVRLRRIS
QQRRAGRLDVAESLLKEALEQSKDNPSLHAFYSIKLSRFLLKLCKNPARARTVLQEAIEL
SPDNSRLYQNLLDLEMSGDLRANGGGVQQCVAKALAAPLSPKTKILFSQRGLQYAEDFGT
TVQSVLSMYDEHQKLLKEHDGKRGAENGDSDDPEKMSKMDDGSAMTVPPQTAPPTMPHVP
ITTPPPPMMGGDMSGSYGSYGSWYQQQYGAYGSYQNPWNQYNQYNQYYPHS
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaaggcacagacgacttgagcaacaacgggcatctgacaaacccttcaggg
ttgtatgatcctgaggttgcagaacttcccaagtcagatgttgttgggtcagaggagagt
ggtgatgggggagacacgagcgccccaacagcatcctacacggcagaaggagaggaggag
gaagagggagagttaccagcagacttcgagagactttggaaactgaccagtgacaatcct
ctggatttcaacagctggactgatcttctgcagtattgtgaacaagagggccacatgagg
gcttgtcgtcaatccctgaatgcatttctggcgaggtaccctctgtgttacggttattgg
aaaaaatttgcagatctcgagagacgagccggtcacaacaacaaagctgaaaaggtgtgt
gaacaaggtttgaaggccatccctctcagtgttgatctctggattcattatgtcaatctg
ctgctgggaacgctcaacatgaacctgcctgagtcagcacagcgcatccgctgtgtgttt
gaggaggcagtggcagccgctggctgggacttccattcagacaggctgtgggatctgtat
gccgagtgggagaaggagcagggaaacctaaaggccatgacagtggtctatgaccgagta
ctgcgggtccccacacagttttacaacatgcactatgaaaaactaaaaacacacttaact
tcccacccgccgcatgacgtcctgtccccagaggagtacaggaaggtgagggctgagtac
aaacagagccaaattcaggccaaaaaagagagaactgatatcgctgcagatgaagaggag
agaccgccaggggaggaagagcctgcagacaacggaaaggactcggaagaggcagtacag
aagatgcaggagcttctgttggccagcagagaggaagtgtaccagcaaaatgaggcagaa
gtcaggaagagatggaactttgaggatgctattaaaaggccgtatttccatgtgaagcct
ctggacagagcccagctgaaagcctggcagagttatctggactgggagatggcagaggct
gagacggcagagatggatgtcgaaaggacgtctgtggaaggccaggaaagctccaaaaaa
gtgtgtgtggctggacatgagagagtactgattctgtttgagcgctgtctcattgcctgc
gcactctatgaggaattctgggataaatatgtgcattacctggaaccacggtgtctggag
gaagtgcgtaacgtgtaccgcagagcttgtgaaatccatcttccatacaaacacagcatc
catcttcagtggtcctcgttcgaagaaaagcatggtaatattttagaggcacagcgcatt
ctagagtctctggagatgacattgcctggtttggctgcggtgcgtttgaggaggataagt
cagcagaggagggcaggtcgtcttgatgtggcagaatcgctactgaaggaggcactagaa
cagagtaaagacaatccctcacttcatgccttctactcgatcaaactttcccgcttcctt
ctcaagctgtgcaagaacccagccagggcccgcactgttctacaggaggccatagagctc
agtccggataacagtaggttgtatcagaaccttctggatctggagatgtcaggtgacctg
cgtgctaatggtggaggggtccagcagtgtgtggctaaagctcttgctgctcctctctcc
ccaaagaccaaaatccttttctcccaacgtggcctacagtacgctgaggattttgggact
acagtacaaagtgtgttgagtatgtatgacgagcaccaaaagctgctaaaggagcacgat
ggaaagagaggagcagagaacggtgatagtgacgatccagagaagatgagtaaaatggat
gatggatctgccatgacggtgcctccacagaccgctccacccactatgcctcacgttccc
attacaacaccacctcctcctatgatgggtggagacatgagtggatcgtatggaagttat
gggagctggtaccagcagcagtacggggcgtacggcagctaccagaacccttggaatcag
tacaatcagtacaatcagtactaccctcacagctaa
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