Myxocyprinus asiaticus (Chinese sucker): 127418377
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Entry
127418377 CDS
T08782
Name
(RefSeq) protocadherin-11 X-linked-like isoform X1
KO
K16498
protocadherin delta 1
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
127418377
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
masi01009
]
127418377
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
masi04515
]
127418377
Protein phosphatases and associated proteins [BR:
masi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127418377
Cell adhesion molecules [BR:
masi04515
]
Cadherins
Protocadherins
127418377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
RibLong
TMEM154
DUF6249
Motif
Other DBs
NCBI-GeneID:
127418377
NCBI-ProteinID:
XP_051514962
LinkDB
All DBs
Position
27:32430123..32709275
Genome browser
AA seq
1228 aa
AA seq
DB search
MDLASEAHVLVVLLTYLFLMCRAQEKDYTVKEEQPENVRIGNLRKDINLNLDPDIKLSSA
LQFKPVYKTGDVPLVKVEASTGEIFTTANRIDREKLCSGVFNEKRCYFEIEVAVLPDEIF
RLVKIRFLIEDINDNAPLFQSTVINISIPENTAINSRYPVPSAFDPDIGINGIQHYELVK
SVSEFGLDIIETPEGDKWPQLIVQQSLDRETKDTFVMKIKVEDGGTPPKSSTAILQVTVS
DVNDNRPVFKDSEVEVNVPENAPMGTSVTHLHATDADLGSNAQIQFSFSNQISPATKRHF
TIDSTTGLITVKQPLDREVNPVHKLIVLASDGSSTPSRATVIVNVTDINDNVPSIDTRYI
MNLVNGTVLLSENAPLNTKIALITVTDRDADLNGKVTCYTDHDVPFRLKPVFNDQFLLET
AAPLDYEMTREYAIRIVASDSGKPPLNTSAMVLIKIKDENDNVPVFPQTEIQLSIPENND
PGTQLIKISATDADSGSNALIIYSLGPDAPDGFKVDPRSGILSVVKRLDREKQEKYSFTV
IARDNGSTSLQNNVTVKLIVQDQNDNSPAFTHSEYNFYVPENLPLYGTVGLITVTDADAG
DNAVVTLSIINGKDNFIIDPKTGVIKPNITFDRERQSSYTFVVKAVDAGQMQTTSYAKVT
INVVDVNDNRPVFVIPSSNYSYDLVPSATSPGSVVTRVFAIDNDTGMNAELQYCIIGGSQ
RGLFAIDKTTGNITLQEKIVAADQGLHRLVVKVKDLGQPESLHAITLVYLFVNDTVSNAT
FIQELLRKSLETPLDRNVGDNNVTPQSNGYVIVVIAIIAGTMTVILVIFVTALVRCRQTP
RHKVVQKSKQSGEWVSPNQEGRQIKKKKKKKKRSPKSLLLNFVTIEEHKSDDPTHEHING
TLDLPVEHEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPVAPKKHHV
IQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKASRQIHTRQNQSQTPDKTFA
DVPAMCPHKQTQRRVTFHLPDGSQESCSDSGLGEQEPNSSASTTQPLPLGFPQEEYYEQT
SPNSRTEGDGNSDPESTIEVNLQKALAEASETCTQECLILGHSDSCWMPPALTQFQTSGA
ATLPSFGFQQSWVRGTKPDGRHTLGRSVPKDDLDKGSNRPQFYNTLERHCSKKEDPIKVI
PLASFSATSSPQTSVSGVSSAFLHEHQL
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atggacttggcaagtgaggcccatgttctggtggttttactcacctatctattcttgatg
tgccgggctcaagagaaggactatacagtaaaagaggagcagccggagaatgtacgcatc
ggaaacctgcgcaaagacatcaacttaaacctcgatccagacattaaactgtcttctgcg
ctgcagtttaaacctgtctacaagacaggtgatgtgcctttggtgaaggtagaagcgagc
acgggagagattttcaccacagccaaccgcattgaccgtgagaagctctgttctggagtc
ttcaacgagaagcgttgttattttgaaattgaggtcgccgtgcttcctgacgagattttc
cgactggtcaagatccggttccttatcgaagacatcaatgacaatgccccgctgttccaa
tctacagtcatcaacatctctattcccgaaaacacagccatcaacagccgctaccccgtc
ccctctgcatttgaccctgatataggaatcaacgggattcagcactatgagcttgtcaag
agtgtaagcgaattcggcctggacatcatcgagaccccagagggagacaaatggccccaa
ctcatagtccagcagagcctcgatcgggagacgaaggacacctttgtgatgaaaattaaa
gtcgaggatggtggcacccctccaaagtccagcacagccattctgcaggtgactgtgtca
gatgtcaatgacaatcgaccagtgttcaaggacagcgaagtggaggtgaatgttcctgag
aatgccccaatgggaacatctgtcacacaccttcatgccacagatgctgatctgggatcc
aatgctcagattcaattctccttcagcaaccaaatctcccctgccaccaaacgacatttc
actattgacagcacaaccggactgattactgtcaagcagccgctggacagggaagtcaac
ccagtccacaagcttatagtgctggccagtgatggaagctcaaccccttcaagggctaca
gtgatagtcaatgtaacagacattaacgacaatgtcccctctatagatactcgttacata
atgaatctcgttaatggcactgtgctgctgtctgaaaatgcccctctaaacacaaaaatt
gccctgattactgtgacggacagagatgctgatctgaatggtaaagtgacttgctacact
gatcatgatgtacctttcaggctcaagcctgtcttcaacgaccagtttctgttagaaacg
gcagcacccttagattatgagatgactcgtgagtacgcaattaggatagttgcatctgat
tcagggaaacctcctttgaacacttctgcaatggttctcattaaaattaaggatgagaat
gataatgtcccagttttccctcagacagaaatccagctgtccattccggaaaacaatgac
cctggcacgcagttgataaaaatcagtgccactgatgcagacagtggttctaatgccctt
attatttatagtcttggcccagatgctcctgatggctttaaagtagatccgcggtctggg
atcctttctgttgtaaaaaggttggatagagagaaacaggagaagtattcattcacagtc
attgccagggataatggttcaacctctcttcagaacaatgtaactgtgaagctaattgtc
caagaccaaaatgacaacagcccagcttttacccattctgagtacaacttctatgtgcct
gaaaacctgcctttgtatggaacagtgggtttgatcactgtcacggatgcagatgctggt
gacaatgcggtcgtgactctctcaatcataaatgggaaggacaatttcatcatcgacccc
aaaactggggtgatcaaaccaaacataacatttgacagggagcgacaaagctcctacact
tttgttgtcaaggctgtggatgcaggtcaaatgcaaaccacctcatatgccaaggtcacc
ataaatgttgttgatgtaaacgacaatcggcctgtgtttgtcattccctcctctaactat
tcttatgatctagttccttcggccaccagtcctgggtcagtggtgacgagagtgtttgcc
attgacaatgacactggcatgaatgctgagctgcagtattgtattatcggagggtcacaa
agaggattgtttgctattgacaaaacaacaggaaatatcactctacaggagaagattgta
gcagcagaccaaggtcttcataggctggtggtaaaggtcaaagacttaggacagcctgag
tctttgcatgcaatcacccttgtttatttgtttgtcaatgataccgtctctaacgccaca
ttcattcaagagctactacgcaagagcttggagactcctttggaccgaaatgttggggac
aacaatgtgacacctcaatccaatggctatgtaattgttgttattgccataattgctggg
actatgactgttatcttggtaatttttgtgaccgctttggtacgctgtcgacagacacca
agacacaaagttgttcagaagagcaaacagagtggcgagtgggtatcacccaaccaggag
ggccggcagattaaaaagaaaaagaagaagaagaagagatctccaaagagtttgctgttg
aattttgtaaccattgaggaacacaagtctgatgaccctacccatgagcacatcaatggc
accttagatcttcctgttgaacatgaggagcagacaatgggaaagtacaactgggctacc
acaccgactacctttaaacctgatagccctgatttagccaagcactacaaatcagcttcc
cctcagccaacattccagatcaaaccagagactcctgtggctcccaagaagcatcatgtc
attcaggaactcccactggacaacacattcgtggtgggctgtgactcactctccaaatgt
tcctccagcagctccgacccctacagcgtttcagaatgcagctgtcaagggggctttaag
gcatctagacaaatccacaccagacagaaccagagccaaactccagataaaacatttgct
gatgtcccagccatgtgcccacataagcagacacaacgtcgtgtgacttttcaccttccg
gatggatctcaggagagctgcagtgacagtgggctaggagagcaggagccgaacagcagt
gccagcaccacccaacctctgcccctgggcttccctcaggaagagtactacgaacagacc
tcaccaaacagccgcacagaaggtgacggcaactccgacccagagtccactattgaagtt
aacctgcagaaggctctcgccgaagcctcggagacctgtacccaggaatgtctgatcctg
ggtcattctgacagctgctggatgccgccagcgctgacccagttccagacatccggtgct
gccactctgccttcctttggatttcaacaaagctgggtgcgggggaccaagccagatggg
cgtcacacccttggcaggtcagtgcccaaagatgatctggacaaagggagcaaccggccc
caattctacaacactcttgagagacactgcagcaagaaagaggatcccatcaaggtcatc
cctctagccagcttttctgccacatccagcccgcagacgtcagtgagcggagtctcctct
gccttcctgcatgagcatcaactgtaa
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