Myxocyprinus asiaticus (Chinese sucker): 127418668
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Entry
127418668 CDS
T08782
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127418668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127418668
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
127418668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
UBA_RAD5A
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
127418668
NCBI-ProteinID:
XP_051515312
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All DBs
Position
28:complement(29753840..29798870)
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AA seq
699 aa
AA seq
DB search
MSRHRNVRGYNYDEDFEDDDMYGQSVEDDYCISPATAAQFIYSRQDSRQARQVETLEEAE
YEEEEMPTSPTITHTLDPLEQVWTGQLYSCLDQMRAVLGDSIPDSTLTRAALKYDYDPHR
ALDFILTEENTNVHTPPARSNPHPEPTTASAPHKAKVQEAPESRVEAEVIPKVARMTVSG
KKQTMGFDVRSAEENVVVATSVRRGPSPEVPAMETPSKPAAVSEDATIPTPLRSAGKSKQ
QLNIRAELEKRQGGKPLLNLVVIGHVDAGKSTLMGHVLYLLGNVNKRTMHKYEQEAKKAG
KASFAYAWVLDETGEERDRGVTMDVGMTKFETDSTVITLMDAPGHKDFIPNMITGAAQAD
VAMLVVDASRGEFEAGFEAGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQEIVS
KLGHFLKQAGFKDSDVFYIPTSGLSGENLTTRSKVPDLTAWYTGPCLLEQMDAFKPPQRS
VEKPFRLCVSDVFKVLTTRTAAKDLAKMLEERDQGSGFCVTGKIEAGFIQTGDKALVMPP
NETCTVKGITLHDEALDWAAAGDHVSLTVTGMDIIKINVGCIFCDPKEPIRACTRFRARI
LLFNIEVPVTQGFPVLLHYQTVSEPATIRKIVSILHKSSGEILKKKPKCLSKGQNAVVEI
QTQRPVALELYKNYKELGRFMLRYVGSTIAAGVVTEIKE
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgccataggaatgtccgaggttataactacgacgaagactttgaggatgatgat
atgtatggacagtctgtggaggatgactactgcatctctcctgccactgctgcacagttt
atctactcgcgccaagactcaaggcaagcacgacaggtggagacgctggaggaggcagaa
tatgaggaagaggagatgccaacctctcccaccatcacacacacacttgacccactagag
caagtttggacaggtcagttgtattcctgtttggatcagatgagagcagtattgggagac
tccattccagattccacactgactcgggcagctctgaaatacgactatgaccctcacaga
gcccttgatttcatcctgactgaggagaacactaatgtacacacccctcctgccagaagc
aatccacatcctgagccaaccaccgcatctgcaccgcataaagctaaagtgcaggaggct
ccagaaagtcgtgttgaagcagaggttatcccaaaggttgcacgtatgactgtatcaggc
aagaagcagaccatgggctttgatgtgcgaagtgcagaagaaaatgtcgttgttgccaca
tcagtccgcagagggccgagtccagaggtcccagccatggagaccccatccaaaccagcg
gctgtgagtgaagacgcgaccatccctaccccactccgctctgctggaaagagcaaacaa
cagctcaacatccgtgctgaactagagaagagacaaggaggaaaaccattactcaacctg
gttgtcataggtcatgtagatgctgggaagagcactctcatgggtcatgtgttgtatctg
ctggggaatgttaataagagaaccatgcataaatatgagcaggaagccaagaaagctggc
aaagcctcattcgcctatgcatgggtcctggatgagacaggagaggagagagacagaggt
gtgaccatggatgttggcatgacaaagtttgagaccgattctacggttatcactctgatg
gatgcaccaggacacaaggactttattccgaacatgatcacaggggctgcacaggcagat
gtggctatgttagtcgtagatgccagccgtggggagtttgaggccgggttcgaggcaggt
gggcagactagggagcatggcctgctagtccgatcacttggagtcacgcagcttgctgtc
gctgtcaacaagatggaccaggtgaactggcagcaggagaggttccaggaaattgtctcc
aagcttggtcactttctgaagcaagctggttttaaggattcagatgtgttctacatccct
acaagcggcctttctggagaaaatctgaccaccaggagcaaagtaccagatctaacagcc
tggtacactgggccatgcctactggaacagatggatgcatttaaacctcctcagaggtca
gtggagaagccattcagactctgtgtgtcagacgtcttcaaagttttgacaaccagaaca
gcagcaaaggaccttgcgaagatgctggaggaaagagatcagggctctgggttctgtgtg
acggggaagatcgaggctggttttattcagacaggagataaagcactggtcatgccacct
aatgagacctgcactgtgaaagggatcactcttcatgatgaagctttagactgggcagct
gctggtgatcatgtcagtctgacggtaactggcatggacatcatcaaaataaatgttgga
tgtatattctgtgatcccaaagagcccatcagagcgtgtacaaggttccgagcaagaatt
ctcctctttaatatagaagttcctgttacgcaaggatttcccgtgctgttgcattatcaa
acagtaagtgaaccggcaactattagaaagatagtcagtatattacacaagagcagtgga
gaaattctcaagaagaaaccaaagtgtttgagtaaaggacagaatgcagtggtggaaatt
caaacacaaaggcctgtggctctggaactttataagaattataaagaactgggtcgattc
atgctcagatatgtgggatcgactattgctgctggagtcgtcacagagatcaaagaataa
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