Myxocyprinus asiaticus (Chinese sucker): 127418707
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Entry
127418707 CDS
T08782
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3-B-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
masi04121
]
127418707
Enzymes [BR:
masi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127418707
Ubiquitin system [BR:
masi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
127418707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
Sina_ZnF
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_5
zf-TRAF
zf-rbx1
Prok-RING_4
U-box
PDZ_Tricorn
DUF6079_4th
TRAF3_RING
RING_XB3-XBAT31
zf-RING_6
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
127418707
NCBI-ProteinID:
XP_051515371
LinkDB
All DBs
Position
28:13064805..13112684
Genome browser
AA seq
1043 aa
AA seq
DB search
MGLDLERFENPVDPELICKLCGKVLEDPLTTPCGHVFCAACVLQWLSKANNCPVQCQKIS
TKELNHVLPLKNLILKLDIKCDHRERGCDRIMKLQHLPVHAEMCDFSPVTCRNKGCDVVV
SLKDVASHLRDKCEHRPVVVCQDGCGLMLTLKEKSEGHCCLRALQMRNGILLAKVQDLER
ELKRQSLRFSNRERSLLSKLSALRCELHMTVQRFQKKITEYKSRIDALSNTWSPLNQGEE
TMSFKGTLNRPSGSLGFSIIGGRLCEEQEDHGDLSDGIYISKVVENGAADKGGLQIHDRI
LEVNGKNLSHATHDQAVEAFQTAKDPIEVQVLRNTAHNKTFKNLASAQGLDNSTQTNITL
KCLSHIEAMAKLPSPPTPQGLAMLDSLLLLTESQMERRDSPYPPDFIDNIQKDTETRGLE
YEEVDLQRIMTQDKLGLTLCCKTDNEKTAIYVSEIDPEGIAAKDGRVQQGDQIIQINGVD
IQSHDEAVTLLTRVKSKNVTLLVARPESQGDGWIEEDRNNFLDDLHMDMLEQQHHQAMQF
NASMLQQNRHEDDGGTTDTATILSNHHEKDSGVGRTDESTRNDESSEQEILGDYQTSACD
TLTGNQKKFNYSQDTVGSGAMHLSNDSFLSIDNGDSGNLLGISGMECEHFRELLELKCLV
NGKSPCGFLEHDTGPYSDGVSLDSNEQEIQMLNEELLNIELECLSNIQAHRLHTKVEGQQ
PSSDSSSMHFTKLTSSDKIHQELINKQVEKESSSAYNSGESCWSIPPALGLSPDSKSTVT
EDRRGSNPMTACLKHPLSPIQETSPAKRHPSPGDTEVTYLGKRKQSEKRNPSKSLLTSSH
HSPLKHNYIPAHAQHYQSYMQLIQQKSAVEYGHSQVSLASLCKNPETCPTESRPKTEWKV
KIRSDGTRYIAKRPTRDKLLKERALRIREERSGITTDDDAVSVLKVGRYWSKEERKQHAA
RAKEQRQRWELIKQSCMESKEQAGALVDKKGPDIIQLSHKKMMRKRNKRIFDNWMTIQEL
LTHGTKSTDETRLYNSFLSVTTV
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgggcttagatcttgaacgttttgagaatcccgtggatcctgaattaatctgtaaactg
tgtgggaaagttttagaggatcctcttaccactccttgtggacatgtcttctgcgctgct
tgcgtgctccagtggctctccaaagccaacaactgcccggtccagtgtcagaagatctcc
accaaagagttgaaccacgtcctgcccctaaaaaacctcattctcaaactggatatcaaa
tgcgatcaccgcgaacgaggctgcgatagaattatgaagctccagcatctgccggtgcac
gcagaaatgtgcgacttctctccggttacatgcagaaataaaggatgcgacgtggtggtc
agtctgaaggatgtggcatcacacttgcgggataaatgcgagcacagaccggtggtggtc
tgtcaggatggatgcgggctgatgctcaccctcaaggagaagtcggagggccactgttgt
ctccgagcgcttcagatgcgcaatgggattctccttgccaaagtgcaggatttggagagg
gagctgaagcgccagtccttgaggttcagtaacagggagagatctctcctctccaaacta
tctgcgctccgctgcgagctgcacatgacagtgcagagatttcagaagaagatcaccgag
tacaagagcaggattgacgcactgtcaaacacctggagccctctgaatcagggagaagaa
acaatgagcttcaaaggcaccctcaacagaccatcaggatctcttggatttagtatcatt
ggaggaagattgtgtgaggaacaagaggatcatggggatctcagtgatgggatctatata
tctaaggttgtggaaaatggagcagctgacaaaggaggactacagattcatgacaggatc
ctagaggtaaatggaaagaacctttcccatgccactcatgatcaagcagtagaggccttc
caaacagccaaagaccccattgaggttcaggtgctgcgcaatacggcgcataacaagact
tttaagaatcttgcatcagcccaaggattggacaacagtactcagactaacattactctg
aaatgtttgtcacatatagaggctatggctaagttgccctcgcctccaacgccacagggt
ttggccatgctggacagtttacttttactcacagagtctcaaatggaaagacgtgattca
ccttaccccccagacttcatcgacaacatacagaaagacactgagaccagaggactggaa
tatgaggaggtagatctgcagaggataatgacacaggataagctcggcctgacgttatgt
tgcaagactgacaatgaaaagactgccatttatgttagcgagattgatccagaaggtatt
gcagcaaaggatggcagagtccagcaaggagaccagattatccagatcaatggagtggac
atccagagccatgatgaggcagtgacacttctgaccagggtgaagagtaagaatgtgacc
ctcctagtggctcgaccagaaagtcagggtgatggctggatagaggaggacagaaacaac
tttctagatgacttgcacatggacatgctggagcaacaacatcatcaggccatgcagttc
aatgccagtatgttgcagcagaacagacatgaagacgacggaggcaccactgatacagca
accatactgtccaatcatcatgagaaagacagcggtgtgggccgtacagatgaaagcact
cgtaatgacgaaagctctgagcaggagattttgggggattaccagacttcagcttgcgac
acactgacaggaaaccaaaagaagttcaactatagccaggacactgtgggaagtggggcc
atgcacctaagcaatgactccttcctgtctattgacaatggagacagtggaaatctcctt
ggtatatctggcatggagtgtgaacacttccgggaactgcttgaactaaaatgcttggtg
aatggcaaaagtccttgtggatttctggagcacgatactggaccatattcagacggagtt
agtttggactccaatgaacaggagattcagatgctcaatgaggaattgctgaacattgag
ctggaatgcctgagtaacatacaagcacacaggcttcacacaaaagtagaagggcagcaa
ccaagcagtgattccagttcaatgcacttcactaaactaacaagttcagacaagatccat
caagaactcatcaataagcaagtggaaaaggaaagctctagcgcttacaactctggagag
agctgttggagcatacctcctgctctggggctttctccagactccaaaagcacagttact
gaagacagacgtggaagcaacccaatgacagcatgcttaaagcatcctctttctcctatt
caggagaccagccccgctaagaggcacccttcccctggagatacagaggtcacgtatttg
ggaaaaagaaagcaaagtgagaaaaggaaccccagtaagagtcttttgacttcctctcat
cattcccctttgaagcataactacattccagcccatgcgcaacattaccaaagctacatg
cagcttatccagcagaagtcagctgtggaatatggccacagtcaggtcagcttagccagc
ctgtgcaagaacccagagacttgccccactgaatccaggcccaagacggagtggaaggta
aagatccgtagtgacggaacacggtacattgcaaaaaggcccactagggacaagctgctg
aaggagcgtgctttgcgtatccgagaagagcgctctggcataacaactgatgacgatgca
gtgagtgtactgaaagtgggtcgatactggagcaaggaggagcgcaagcagcatgcagcg
cgagccaaagaacaacggcaacggtgggaactcatcaagcagagctgtatggagagcaag
gagcaagcaggagctttggttgacaagaaagggccagatattatccagctcagccacaaa
aagatgatgaggaaaagaaacaagaggatttttgacaactggatgaccattcaagagctg
ctgacacatggcacgaaatcaacagatgagacaagactatataattccttcctttccgtg
actacagtgtaa
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integrated database retrieval system
