Myxocyprinus asiaticus (Chinese sucker): 127418792
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Entry
127418792 CDS
T08782
Name
(RefSeq) ATP-dependent RNA helicase DDX19A-like isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03013
Nucleocytoplasmic transport
masi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127418792
03015 mRNA surveillance pathway
127418792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127418792
Enzymes [BR:
masi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127418792
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
127418792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
127418792
NCBI-ProteinID:
XP_051515578
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All DBs
Position
28:complement(34281051..34300902)
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AA seq
491 aa
AA seq
DB search
MATDSWAFAVDEQEASTKFIDYNCNSVVWKKIRNLRIMDVGDAPVLCSNGTKPVDDGDKS
DEEEKEDKATQSLLNKLIRSNLVNNTNQVEVLQRDPNSPLYSVKTFEELRLKPQLLKGVY
EMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPALKWTQCLCI
SPTYELALQTGKVIEQMGKFYPEVTLAYAVRGHRMERGIKISEQIVIGTPGTVLDWCIKL
KLIDLRKIKVFVLDEADVMIATQGHQDQSIRIQRMLPKGCQMLLFSATFEDSVWNFAVRV
VPDPNIIKLKREEETLDTIKQYYVLCNSKEDKYNALCNIYGAITIAQAMIFCHTRKTANW
LAGQMSKEGHQVALLSGEMVVEQRAAIIERFRDGKEKVLITTNVCARGIDVEQVSVVINF
DLPLDKDHNPDNETYLHRIGRTGRFGKRGLAINMVDSQRSMEILKTIERHFNKKILRLDT
DDLDEIEKIAN
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccgactcatgggcttttgcggtggacgaacaagaggcttcaaccaagtttatt
gactataactgcaattctgttgtttggaaaaagattcggaacttacggattatggacgtg
ggagatgcacctgtactttgctctaatggaacaaaaccagtagatgatggtgacaaatcg
gatgaagaggagaaagaggacaaagccacacagtccctcttaaataagctcatcagaagc
aatttagtcaacaacacaaaccaagtggaggttcttcagagggatccaaactcccctctg
tattcagtgaagacctttgaggagctaagactgaaacctcagctgctcaaaggcgtgtat
gaaatgggcttcaacagaccctctaaaattcaagagaatgcacttcccatgatgctcgcc
gaaccacctcagaatctgatcgctcagtctcagtctggcactggtaaaacggccgccttc
gtattggccatgctcagccatgtggacccagcccttaaatggacacagtgtttgtgcatt
tctcccacttatgagctcgctctgcaaacgggtaaagtcattgagcagatgggcaaattc
tacccagaggtcacactggcatatgcagttcgtggacacagaatggagcgtggcattaaa
atcagtgagcagattgtcatcgggacacccgggaccgttctagactggtgcatcaaactg
aaactcattgacctgaggaagatcaaagtgtttgttttggatgaggctgatgtcatgatc
gccacgcagggccaccaggatcaaagcatccgcattcagagaatgctgcccaaaggctgc
cagatgttacttttctctgctacatttgaggactccgtgtggaattttgcagtgcgggtc
gtgccggaccccaacatcatcaagctcaaacgagaagaggagaccctggacactatcaag
cagtactatgtgctctgcaatagcaaggaggacaaatacaatgcactctgtaacatttat
ggagctatcactatagcacaagctatgatcttctgtcatactcgtaaaacagccaactgg
ctcgcagggcagatgtctaaagaaggccaccaggtggcgcttctcagtggtgaaatggta
gtagagcaaagagctgcaattattgaacgattcagagatggcaaagagaaggttcttatc
actactaatgtctgtgcaagaggtattgatgtcgaacaagtgtctgtggtgatcaacttt
gacctacctctggacaaagaccacaatccagacaatgaaacgtacctccataggatcggg
agaacaggacgatttggcaagagagggcttgccatcaacatggtggacagccagcgcagc
atggagattctcaagacaattgaaaggcattttaataagaaaattctgaggctggataca
gatgatcttgacgaaatcgaaaagattgccaactga
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