Myxocyprinus asiaticus (Chinese sucker): 127418871
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Entry
127418871 CDS
T08782
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
masi04812
]
127418871
Cytoskeleton proteins [BR:
masi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
127418871
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
Katanin_con80
Beta-prop_WDR3_2nd
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML
DSE1_N
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_WDR75_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_IFT140_1st
NBCH_WD40
PAC11
Beta-prop_TEP1_C
Beta-prop_NOL10_N
Beta-prop_SPT8
ASA1
Beta-prop_VPS8
Beta-prop_EIPR1
Beta-prop_WDR41
CFAP251_N
Beta-prop_Vps41
Beta-prop_HPS5
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
Beta-prop_DCAF12
PROPPIN
Beta-prop_ACSF4
Tricorn_2nd
Beta-prop_WDR35_TULP_N
WD_LRWD1
Beta-prop_IP5PC_F
Beta-prop_NUP159_NUP214
Beta-prop_LRRK2
Beta-prop_pof12
RMC1_N
Ge1_WD40
Tricorn_N
Motif
Other DBs
NCBI-GeneID:
127418871
NCBI-ProteinID:
XP_051515728
LinkDB
All DBs
Position
1:complement(49556621..49574218)
Genome browser
AA seq
694 aa
AA seq
DB search
MALTNTTITSWKLQEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLT
GHTSPVECIQFNSSEERVVAGSQSGSLRLWDLEAAKILRTLMGHKANICSLDFHPMGEYL
ASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTIKLWDLIAGK
MITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNKIGSSEGETGVVRSILFN
PDGSCLYSGSENTLRVYGWEPDRCFDVVHVGWGKLADLAISNNQMIAVSYSQTNVSWYVV
DLNRVKKSGSVIQGLIQDKPIPTPTSAQGTTLRRNYERPTTSCTRQEMKQSSEADRRSPE
GERRSPSSEDEKEDKESSAEITNPEDYKEIFQPHSVISRTPPKKTEPFPAPLEHSFSESV
LEKPGPAVKIVTPVMDRAGQLKAPITSSTPVQRVEPTVIAAAPRPVSVVTTAVASPSRPV
VTTTKPKPTTGIILSTRNEPIGLNVGDFLSHARNSKASVMGDEEALAQIRKGHDTMCVML
TSRYKNLDTVRSVWASGDVKTSLDSAVSMNDLSIVVDILNIINLKPSLWKLDLCTSILPQ
IEELLQSKYESYVQTGCMSLKLILKRFWPLISDTLTAPPSVGVDITREERHQKCKACYKQ
LKNLSNVVKNRAELVGRHGSTFKELQLLMAPLDY
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggctctcaccaacaccaccataacatcatggaaattgcaggagatcgtggctcactcc
agcaatgtgtcttcactggtgttggggaaatcgtctggacgtttgctggccactggtggc
gaggactgcagagtcaatatctgggctgtcagcaaacctaactgcattatgagtttgaca
ggccataccagccctgtggagtgtatccagttcaacagctctgaggaacgagtggtggcc
gggtcccagtccggctctctgcggctttgggacttggaggcagctaaaattttgcgcact
ctgatgggacacaaggccaatatctgcagtctggattttcatcccatgggagagtacctg
gcttccggctctgtggatagtaatattaagctgtgggatgtgagaaggaaaggatgtgtg
tttagatataagggtcacactcaggctgtgcgctgtctagctttcagccctgatgggaaa
tggcttgcttcagccagtgatgacagcacaataaagctgtgggatctcatagcaggcaag
atgatcactgaattcacatcacacacatcagcggtcaatgttgtgcaattccaccccaat
gagtacctgctcgcatctgggagtgcagatcggactgttaagctttgggacctggagaaa
ttcaacaagattggctcgtcagagggggagacaggagttgtgagaagtatattatttaat
cctgatggtagctgcttgtacagtggctctgagaacacactacgagtatatggttgggaa
ccagaccgctgctttgatgtggtgcatgtaggctggggcaaattggctgacctggccatc
agcaacaaccaaatgattgcagtgtcctacagtcaaactaatgtgagctggtatgttgtg
gatcttaaccgagtgaagaagtctggatctgtgatccaagggctgattcaggataaaccg
atcccaactcccacatctgcacaaggaacaacactacgtagaaattatgagcgacccact
acatcctgtaccagacaggagatgaagcagagttcggaagctgatcgccggagtccagaa
ggagaaaggaggagtcccagcagtgaggatgagaaagaagacaaagagagcagtgcagaa
atcaccaacccagaagattataaagagatctttcagccccacagcgtcatctcacgaaca
ccacctaaaaagactgaacctttccccgcacccctagagcactctttctcagagagtgta
ttggagaagcctggcccggcagtcaagattgtaacccctgtaatggaccgagctggacag
ttgaaagctcccattacctcctctacgccagttcaaagagtggaaccaactgtgatcgct
gctgctccccgccctgtctccgtggtaaccacagctgtggcctccccctctcgtcctgtt
gttactaccaccaaacctaaacccactacaggaatcatcctctcaacgcgcaatgagccc
attggactcaatgtaggggacttcctttcgcatgcgcgaaacagtaaagccagtgtgatg
ggagatgaagaggcgttggcacagatcaggaaagggcatgacaccatgtgcgtaatgctg
accagtcgatataaaaacctggacaccgtacgctcagtctgggccagtggtgatgtcaag
acttccctggattcagctgtttctatgaatgatctttctattgtggtggacatccttaac
ataatcaacctcaaaccatcactatggaagttggacctctgcacttctatactgccacag
attgaggaactcttgcagagcaagtatgaaagttacgtgcagactggttgtatgtctttg
aagttgatcctgaagcgtttttggccattaatctctgacacgctgactgctcctccatct
gtaggggtggacattactcgagaggagaggcatcagaaatgtaaagcgtgctataagcag
ctgaagaacctcagtaatgttgtgaagaaccgggcggagctggttggtcgtcatggcagt
acttttaaagagctacaactacttatggccccactggactactga
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