Myxocyprinus asiaticus (Chinese sucker): 127419134
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Entry
127419134 CDS
T08782
Name
(RefSeq) ubiquitin conjugation factor E4 B-like isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04120
Ubiquitin mediated proteolysis
masi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127419134
04120 Ubiquitin mediated proteolysis
127419134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
masi04121
]
127419134
Enzymes [BR:
masi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127419134
Ubiquitin system [BR:
masi04121
]
Ubiquitin ligases (E3)
U-box type E3
127419134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
127419134
NCBI-ProteinID:
XP_051516247
LinkDB
All DBs
Position
28:complement(27833867..27874110)
Genome browser
AA seq
1350 aa
AA seq
DB search
MEQLSPEEIRRRRLARLAGGQTSQPSTPLTSPQRETPPGPLPGPSGASSQPVPPAPSHTL
GLNAQNVTPATSPMGASGVTYRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDTASC
EKSMSQVDVDSGIENMEVEDSDRREKRNLSEKDSSSNPDVSEEQALQLICKILRVSWKEQ
DRDVIFLPSLAVEFQKNPQDVYSDFKDLIGQILMEALMISTHSRDCNPFASLTATSQPIS
AARSPDRHLTLVPPTNQSGSPMMPCAGSFGASSLSSLYGCSPNPLALSSARMSAPSVPPP
SAAPSAATLQVPPSPPVSRPPTSIPSLSPSAPLPISQRYRPYSLSSSIPISSSPRSAPSA
TLTPPTTSGMPSSPSPRQRTTHSSMPIPFLPGSPSTIARRTALAARMPSSPFSLLFFGLS
NMSQDSSDEELEEEEDFSGVQFGSSLGASGGGMAGDSGSDRFTIESCKETEMLNYLIERF
DSVGMEERKAPKMCSQPVVSHLLSNMRSQCISHAALVLQGALTQPRAPLQPSLLVPYMLC
RNLPYGFIQELVRMTHQEDEVFKQIFIPILQGLTLAVKECSFESDNFKFPLMALAELCEI
KFGKTHPVCSLITSLPLWCPDPLSPGTGREIQRLSFLGAFFSLSVFAEDDTKVGDKHFSG
PAITTENTRVVSQSLQHYLESARGDLFKILHNILLNGETRESALSYMAALVNRNVKKAQM
QTDDKLVSTDGFMMNFLWVLQQLSMKIKLETVDPLYIFHPKCRLNVSPEETRLNATMEEL
KSWLAELQEEPSRFSEPKFPTECFFLTLHAHHLSILPCCRRYIRRLRAIRDLNRTVEELK
NSENQWKDSPLASRHREMLKRCKTQLKKLVRSKACADAGLLDENLLRRCLQFFSMVIQLI
LCMVVPTFPHVTLPLNPEIPKSFAALPEFYIEDVAEFLLFIVQYSPQVLYEPCTGDIVTF
LVVFICSQNYIKNPYLIAKLVEVLFVTNPAVQPRTQRFFEMMENHPQAVNQLVPALMKFY
TDVEHTGATSEFYDKFTIRYHISTIFKSLWQNVSHQGTFLEEFNSGKQFVRYINMLINDT
TFLLDESLESLKRIHEIQEEMKNKEQWDQLPRDQQQSRQSQLTQDERVSRSYLALATETV
DMFHILTKQVQKPFLRPELGPRLAAMLNYNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQ
LTDIYLQLDCARFAKAIADDQRSYSRELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEI
VARNSQSEMDYSDAPDEFKDPLMDTLMSDPVQLPSGNIMDRAIILRHLLNSPTDPFNRQP
LTENMLEPVPELKERIQAWMREKQTGRFSQ
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atggagcagctcagtcctgaagagatccgaagaaggcgactggcccggttagctggaggg
cagacgtcccagcccagcacccctttgacctccccacagagagagaccccaccaggacct
ttgccaggtccctctggggcctcatcgcagcctgtcccaccagctccatcccacactctg
ggccttaatgcccaaaatgtcacccctgccacctctccaatgggagcctccggggttact
taccgcagccagagcagcgaaggggtcagctctctctccagctctccatctaacagcctg
gagacacaatcccagtccctgtcccgctcccagagcatggacattgacacagcatcctgc
gagaagagcatgtcccaagtagacgttgactcaggaattgagaatatggaggtggaagac
agtgaccgcagagagaaaaggaacctgtctgaaaaggactcctcatctaatcctgatgtc
tctgaagagcaggctttgcagctcatctgtaagatcttgcgtgtttcttggaaggagcag
gaccgtgatgtcatcttcctcccttcacttgcagtggagttccagaagaaccctcaggat
gtttactctgacttcaaagacctgattggccagattttaatggaggctcttatgatatcc
acacattctcgtgactgtaacccattcgcaagcttgactgccacatctcagccaatttct
gctgccagatcacctgaccgccacctgactctcgtcccacccaccaaccagagcggcagt
cccatgatgccctgcgctggttcatttggtgccagctctctgtccagtctgtatggttgt
agcccaaacccgctagctctcagctctgccagaatgagcgctccatctgtcccaccaccc
tctgctgccccctctgcagccacccttcaagttccccccagtcctccagtttctcgccct
cccaccagcatcccgtctctctctccatctgcccctctgcccatctcccagagatacagg
ccctattccctcagctcctccatccccatcagctcaagccccagatctgccccatctgct
acacttacaccccctacaacctcaggtatgccctccagcccctcccctagacagcgtacc
acccattcctccatgccaatccccttcttacccggctcccccagcactattgcgagacgg
actgcgctagctgcacggatgccctctagcccgttctccctcctcttcttcggcctgtcc
aacatgtctcaggacagcagtgatgaagaactagaggaagaggaggatttttctggggtt
cagtttgggtccagcctaggagcatctggagggggtatggctggtgactcgggtagtgac
cgctttaccatagagtcatgtaaagagactgagatgctcaactacctcatcgagcgcttt
gacagtgtgggcatggaggagaggaaggccccaaagatgtgcagccaaccagttgtcagt
cacctgctcagcaacatgcgttcccagtgtatttcccatgctgcactagtgctccaaggg
gccctcacacagcccagggcccctctgcagccttccctgcttgttccctacatgctgtgc
cggaacctaccgtatggcttcatccaggagctggtgcgcatgactcaccaggaggatgag
gtgttcaaacagatcttcatacccattcttcaagggctcactttagctgtaaaagaatgt
tcctttgaaagcgataacttcaagttccccctaatggctttagctgaactttgtgaaatt
aagtttgggaagactcaccctgtttgtagtttgatcacctctctgccattgtggtgtcct
gaccctcttagtcccgggacaggaagagaaattcaaagactctccttccttggagccttc
ttcagtctgtctgtgtttgcagaggatgacactaaagtgggtgacaagcacttctcaggc
cctgccattactacggagaacactcgtgtggtcagccagtcactgcagcactatctggag
tctgcgaggggagatttatttaaaatcctgcacaacatcttgctaaatggagagacaagg
gaatcggctctgagctacatggctgctctggtgaatcgtaatgtgaagaaggctcagatg
cagactgatgataagctggtgtccacagatggcttcatgatgaatttcctgtgggtgctg
cagcagctgagtatgaagatcaagctggaaactgtggatcctctctacatcttccacccc
aaatgtcgactgaatgtcagcccggaagagacccgactcaatgccacgatggaggagctg
aagagctggctcgcagagctgcaggaagagccatccaggttctcagagcccaagtttcct
acagagtgcttcttcctgacgcttcatgcacatcacctgtccatcctcccatgctgtcga
cgctacatacgcagactgagggcgatccgggatcttaacagaactgttgaagagctgaag
aacagtgaaaaccagtggaaggactcccctttggctagtcgtcatcgggagatgctgaag
agatgtaaaacccagctgaagaaactggtgcgctctaaagcctgcgctgatgcagggttg
ctggacgagaacctgctgcgcagatgtctacagttcttcagtatggtcatccagctcatc
ttgtgcatggtggtgcccactttcccacatgtaaccctgcctctgaacccagagatcccc
aaaagctttgcagcactgcctgagttttacattgaagatgtggccgagttcctacttttt
attgtgcagtactctccacaggttctttatgagccgtgcactggggacattgtgaccttc
ctggtggtcttcatttgcagtcagaactacataaagaacccatacctgatcgccaagctg
gtggaggtgctgttcgtcaccaaccccgcagtacagccacgcactcagcgtttctttgag
atgatggagaaccacccacaggctgtcaatcagcttgtgcccgccctcatgaagttctat
acagatgtggagcacactggagccacaagtgagttctatgacaagttcaccattcgctac
cacatcagcaccatatttaaaagtctgtggcaaaatgtcagccaccaaggcaccttcctt
gaggagttcaactctggaaagcagtttgtacgctacatcaacatgctcattaacgataca
acttttctgctggatgagagtttggagtctctgaaacgcatccatgagatccaggaggag
atgaagaacaaagagcaatgggatcagctgcccagggaccagcaacagagccgtcagtcc
cagctgactcaggatgagagagtgtcacgctcgtacctggctttagctacagagacagtg
gacatgttccatatccttaccaaacaggtccaaaagcccttccttaggcccgaactgggg
cctcgtctggctgccatgttgaactataaccttcagcagctgtgtgggcctaaatgtcga
gacctgaaggtggaaaaccctgaaaaatatggttttgagccaaagaagctcctggatcag
ttaactgatatctacctgcagctggactgtgcccgatttgctaaagccattgcagatgac
cagcgatcatacagcagggagctctttgaggaggtcatttctaaaatgagaaaggctggc
ataaaatccaccatcgctattgaaaaattcaaacttctggctgagaaggtagaggagata
gtagcccgcaattctcaatctgagatggattacagtgatgccccagatgagttcaaagac
ccgctgatggacactcttatgtctgaccctgtgcaactgccctctggaaacatcatggac
cgagccatcatcctgcgacacctcctgaactctcccactgacccctttaacagacagccc
ctcactgagaacatgctggaaccagtcccagagctgaaggagcgaatccaggcctggatg
agagagaaacagactggccgtttttctcagtga
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