Myxocyprinus asiaticus (Chinese sucker): 127419558
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Entry
127419558 CDS
T08782
Name
(RefSeq) probable ribonuclease ZC3H12B isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127419558
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
127419558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
KH_N4BP1_1st
TNFR_ELAPOR1_6th
UBA_N4BP1_C
zf-CCCH_4
zf-CCCH_2
Omega-toxin
Motif
Other DBs
NCBI-GeneID:
127419558
NCBI-ProteinID:
XP_051517025
LinkDB
All DBs
Position
3:16806304..16839679
Genome browser
AA seq
1030 aa
AA seq
DB search
MILELAALAGAGPALQRYIPHIQRVFRVRVSCSTAESSCDSPNASSSIIVNIEDGKEEDC
IKAKEYIVSLISPVHKHRERLTLWLQRRLHALHAAIEYESCAVVQVRDHALELQGGHAQV
TAACAMLQRLKMEHRSCRDPQPLPAAAGHDSPEDEEEDDEEAGEEGSSSESEGEARSRSG
SSGGGVGAAGPGEGATGRRREPLIVTKPHRQLCRSPCLDQPSFSQSSTLQELRADDPRAD
LSHTDPSQRTASLAPPTSASQAPIRQTSERDYQTKMDFALKLGYSGEQVESVLSKLGPSA
LINDVLAELVRLGNKGEPESQGAVGSANLAPRAVGAKEAVSPEASLEEDTPDTYDNLRPI
VIDGSNVAMSHGNKEVFSCLGIQLAVDWFLEKGHKDITVFVPAWRKEQSRPDAPIKDQEI
LRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLACDSDGIIVSNDNYRDLQNEKPEWKK
FIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVVPEHKKQPCPYGQYSKSKKCT
YGHKCKYYHPERANQPQRAVADELRAFAKLSAVKTMSEGALAKCGTSSAVAKGDCSSEAK
RVTPKRQSDPSIRSVACEQEERLCPMRKAEASSVPSLVSALSVPTMPLPKSHAAGALNTR
SASSPVPGSLHFTHSSLEHAGSVQYPPILVTNSQGASVAYGEPFPKYDSVVSDHGYYSML
SDFSTISLQDSFCSLEQPEPMGVGGGGGYPGRAPSMCPEPGRSHSSDSFSSYSGDMYLNS
MEGSLDDSMKGPPTQTQSQPSAQTRLQAFAHGFHHEALTRVQSYGTDEPKPGPRKQSSAH
LAPHSQHPVIGARSSCPGDYPPLSQNVLPSASPAQHGRSLGMTRMDSISDSRLYESNPLR
QRRPPLCREQHASWDPLPCGNESYCYGGYGLTGGLMPCCERVMVRSMPEKMEQIWRSPWD
SLPPPLPATRGLAVDPQEWHPIPEHQFQTYRNLCNIFPAYVVHSVMEKNPHMTDPQQLAA
VIVTKLRSCH
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgattttggagctcgcagcgctcgccggtgcaggccctgcgctccagcgctacatcccg
cacattcagcgggttttccgggtcagagtgagctgcagcaccgccgagtccagctgcgac
agccccaacgcaagctccagtatcatcgttaacattgaggacggcaaggaagaagattgc
attaaagctaaagagtacattgtgtccctgatcagtcctgttcataagcaccgtgagcgt
ttgactctctggctgcagcggcgtctgcatgccctacatgcagctattgagtatgagagc
tgcgccgtggtgcaggtgagggaccatgcactggagcttcagggaggtcatgcgcaggta
acggctgcatgcgctatgctgcagcgcctcaagatggagcaccgcagctgccgtgaccct
cagcccttgcctgccgctgctggccacgactctccagaggatgaggaggaggatgacgaa
gaagctggggaagaggggagcagttcagagagtgaaggagaggcgcggtcaagaagcggg
agttccggaggaggtgttggtgcagcaggcccaggcgaaggagcaacaggaaggagacga
gagccgcttattgtgaccaaaccccaccgccagctgtgccggtcaccctgtttggaccaa
cctagcttcagccaaagcagcaccttacaggagttacgtgcagatgacccacgtgccgac
ctatcacacactgacccctctcagaggacggcctcacttgctccacccacttctgcatcc
caggcacccatacgacaaacaagcgaacgagattaccaaaccaaaatggactttgctctg
aaactgggctactctggagagcaggtggagtctgtgctgagtaaactggggcccagtgcg
ctaatcaatgacgtattagctgagctggtgcggctggggaataaaggggaaccagagagc
cagggagcagtgggttctgccaatttagcgccacgggcagtaggagccaaagaagccgta
agccctgaggcatcgctggaggaagacacaccagacacatacgacaacctccgaccaatc
gttattgatggatcaaatgttgccatgagccatggaaacaaagaggtgttctcatgtctg
ggcatccaactggctgtggattggttcctggagaaaggccacaaagacatcacagtcttc
gtcccagcatggaggaaagaacagtcaagacctgacgcaccaatcaaagatcaggagatc
ctgcgaaagttagagaaggagaaaatcctcgtattcactccatctcgcagagtccagggc
agacgagtggtgtgctacgacgaccgctttatcgtcaagctggcctgcgactccgacgga
atcattgtgtccaacgacaactacagagacctgcagaatgagaaaccagagtggaagaaa
tttatagaggaacgactcctcatgtacagcttcgtcaatgacaaatttatgcctcccgat
gatcctttaggcagacacggacccagtctcgaaaattttcttcgtaaacggccagtggtt
ccagagcacaagaagcagccatgtccatatggtcagtacagcaaaagtaagaagtgcaca
tacggtcataagtgcaagtactaccacccagagagagccaatcaaccacaacgtgctgtc
gctgacgagctccgagccttcgccaaactgtccgccgtaaagacaatgagtgagggggca
cttgcgaaatgtggcacctctagcgctgtcgccaagggagactgtagctcggaggcaaag
cgagtgacacctaagcgccagtctgaccccagtatccggtcagtcgcttgtgagcaggaa
gagagactctgcccaatgcggaaggccgaggcaagttctgtaccatctttagtgtcagcg
cttagtgttccaaccatgccactgccaaaaagtcacgcagcgggcgctctgaacacgcgc
tcggcgagcagccctgttccagggtctctgcactttacccacagctccctggaacatgcg
ggcagcgttcagtaccctcccatcctggtcaccaacagccagggtgcctccgttgcttac
ggtgagccattccccaagtatgactctgtggtgagcgatcacggctactattccatgctc
agtgacttttccaccataagcttgcaagacagtttttgcagtctggagcagccagagccc
atgggggtgggtggagggggagggtaccctggcagagccccaagcatgtgcccagagcct
ggccgaagccactcgtctgactccttctcatcttatagtggagacatgtatctcaactca
atggagggcagcttagatgacagcatgaaagggccacctacgcagacacagtcgcaacct
tctgcgcaaacacgccttcaagcatttgctcacggttttcaccatgaggccttgacacgt
gtgcagagctacggtacggatgaacccaaaccaggacctcgcaagcagtcgtccgcccac
cttgcaccccattcccagcacccagtcattggagctcgatccagctgcccaggagactac
cctcccctctcccagaatgtgttgccttctgctagccccgctcagcatggtcgctcctta
ggcatgactcgcatggacagtatctccgactcacggctctacgagagcaacccgctacgg
caacggcgaccacctctttgcagagagcagcatgctagctgggaccctttgccgtgcggt
aacgaatcctactgttatggaggctatggtttaacgggaggtctcatgccttgctgcgag
agggtgatggtccgcagtatgccggagaagatggagcagatctggaggtccccttgggat
agcttgccacctcctctgccagccactcgtgggcttgcagtggacccccaagagtggcat
cctattccagagcaccagtttcaaacataccgaaacctctgcaacatcttcccggcgtac
gtggtccattcagtcatggagaagaaccctcacatgaccgatccccagcagctggctgcc
gtcatcgtcacgaaattacgctcttgccactaa
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