Myxocyprinus asiaticus (Chinese sucker): 127419949
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Entry
127419949 CDS
T08782
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127419949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127419949
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
127419949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
HisK_N
Motif
Other DBs
NCBI-GeneID:
127419949
NCBI-ProteinID:
XP_051517765
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Position
29:35049979..35068037
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AA seq
896 aa
AA seq
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MAASTSSAASTKHSENLSSAEETEFCPGFKDVDAFVKHGLGAVVAATKASASLPSAGDEF
DLYRSFSAFQEFCVSQGDRLLHGMSQIMQHHGCRSHMRDRNKLTGLEDRFDLVVDSNDAI
LEKVGILLDEASGVSRTQQPVMPTGYQPPKIVVSSWNRRGGDRSTETFHLLHAKNVQRPQ
LKFKEKVDNSNTPFVSKIFIKPNALKPLPSYFTNKHIRKERPEDLDVPAALADFIHQQRT
QEHVDDMFSHPYQYELDHLVMPESLKTKPDPQMYKPFADSSCQFIDTLEDLVALNEKLAK
MTEFAVDLEHHSYRSFLGITCLMQISTREEDFIIDTLELRSEMYILNETFTDPTIMKLFH
GADSDIEWLQKDFGLYVVNMFDTHHAARCLNLGRNSLDHLLKVYCNVNSDKRYQLADWRI
RPLPDEMIKYARADTHYLLYIYDRVRADLYDLGNGQPTLIQQVWSKSRDLCLKKFVKPIF
TEDSYMELYRKQKRIFNTQQLAAFRLLYAWRDKLAREEDESTGYILPNHMMMKIAEELPK
EPQGIIACCNPTPPLVRQQINELHQLIKQAREIPLLKVEVLAEKRKSLTPKRKPQYSLFG
PHDTSRSSESDFLDLSSIETPTKPGVLFAEEDNESMDKDEQLLYSLKATTKISLFAEEEE
ETTAAPAHLTVAQQKAHSIMASFENPFRMYLPSKDIHISKNAKYDPSTKIYEIRNRWKLQ
SIEQQQKEAEVKQQAKERAKKAQKERKKAKQSYQESLQNVNTVRQQVMEAKQSGQKRERV
ASEVGEESLKPNKKVLKTATSEAEQSTTSAPRNQKPKAAQDVPKQNFKPYDYTQSNLKMF
DGKSKESSHFDPNRQAHETRQKKNQKGKKKGAMGGKSMSYLPAKSERGFHHNWPKR
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctccacgagcagtgcggccagtacaaaacacagtgaaaatctttcatcagct
gaagaaacagagttttgtccgggttttaaagatgtcgacgcatttgtcaagcatggactg
ggagctgtggtcgctgccacgaaggcgagtgcgtctcttccttcagcaggagatgagttt
gatctgtaccgcagcttctctgcgtttcaagagttctgtgtgtcacagggagatcgactt
ctacacggtatgagccagataatgcaacaccatggttgtagatctcacatgagagaccgg
aacaaactgacaggcctggaggacagatttgacctggtggtggactcaaatgatgccatt
cttgagaaagtgggcattctcctggatgaggcctctggtgtgagtcgcacccagcagcct
gtgatgcccacaggctatcagccacccaagatcgttgtgtccagttggaatcgcagggga
ggagaccggagcacagagacctttcaccttctacatgccaaaaatgttcaacggccgcag
ctaaagttcaaggagaaagtggataacagcaacaccccctttgtctccaaaatcttcatc
aaacccaatgctttaaaacctctgccttcatactttaccaacaaacacattcgtaaggag
agaccagaggatttggacgttcctgctgcgctggcggatttcatccatcagcagagaaca
caagaacatgtggatgacatgttttctcacccctaccagtatgagctggaccatctggtc
atgccagagagtctgaaaaccaaacctgatccccagatgtataaaccatttgctgactca
agttgtcagttcattgacactttagaagatctcgttgctctgaatgagaaattggccaag
atgacagagtttgcggtggatcttgagcatcattcctacagaagctttctaggaatcacg
tgtctgatgcagatatcaacacgggaagaggatttcattatagacacgctggagctgcgc
agtgaaatgtacattttaaatgagacattcactgaccccaccattatgaagttgtttcat
ggtgctgattcagacattgagtggcttcagaaggactttggtctctatgttgtcaacatg
tttgatacccatcacgctgctcgttgtctaaacctcggccgaaactctcttgaccatctt
ctgaaagtatactgcaacgtgaactcggataaacgctaccagttggcagactggagaata
cgaccattgccagatgagatgatcaagtatgctcgtgctgacactcactatctgctctat
atatatgatcgagtcagagctgacctttatgatttgggcaacgggcaacccaccctcatt
cagcaagtgtggtctaaaagcagagacctctgcctcaagaaatttgtgaagcctattttt
actgaggactcgtatatggagctgtaccgtaagcagaagaggatcttcaacacgcagcag
ctggcagccttcagactgctttatgcctggagagataaactcgcccgagaggaagatgag
agtacagggtacatcttaccaaaccacatgatgatgaagattgctgaggagcttccaaag
gagccacagggtatcatcgcatgctgtaaccccacaccaccactagtgcgtcaacagatc
aatgaacttcatcaactcatcaaacaggctcgagagattcccctactgaaagtagaagtt
cttgctgaaaaaaggaaatcattaaccccaaaaagaaagccacagtattcattatttgga
ccgcatgatacctcccgctcatctgagagtgatttcctggacctctcttccattgaaaca
ccaaccaaaccgggagttctgtttgcagaggaggacaacgaaagcatggacaaagatgaa
caattgttgtatagcctcaaagcaacaacaaaaatcagcctctttgcggaggaggaggag
gagacaacagcagctcctgctcatctgacagtggcacaacagaaagcacacagtatcatg
gcatcatttgagaacccttttcgaatgtatttaccatcaaaggacattcacatatcaaag
aatgccaaatatgacccctcgacaaagatctacgagattcgtaacaggtggaaattacag
agtattgagcagcagcagaaggaagctgaagtgaaacagcaagccaaagaacgggcaaag
aaagctcaaaaggaacgcaagaaagccaaacagagctatcaggagtcgctgcagaatgtg
aacactgtcagacagcaagtgatggaagcaaagcagtctgggcagaagagggagagagtt
gctagtgaagttggcgaagagagccttaaaccaaacaagaaagtcttgaagactgcgaca
tcagaggctgagcagtcgaccacatctgctccgagaaaccagaaaccgaaagctgctcaa
gatgttcccaaacaaaactttaaaccttatgactacacccagtcaaatttaaaaatgttt
gatggaaaatcaaaagagagttcacattttgatcccaacagacaagcacatgaaaccagg
caaaagaaaaatcaaaaaggaaaaaagaaaggtgctatgggtggcaaaagcatgtcttac
ttgccagcaaagtcagagagagggtttcaccataactggcctaagagatag
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