Myxocyprinus asiaticus (Chinese sucker): 127420038
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Entry
127420038 CDS
T08782
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
127420038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
masi04121
]
127420038
Enzymes [BR:
masi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127420038
Ubiquitin system [BR:
masi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127420038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
zf-B_box
zf-RING_5
zf-C3HC4_2
zf-RING_2
RING_XB3-XBAT31
ANCHR-like_BBOX
zf-RING_4
zf-UBR
U-box
zf_RING_Vps8
zf-rbx1
Sipho_Gp157
DUF2180
zf-Nse
Motif
Other DBs
NCBI-GeneID:
127420038
NCBI-ProteinID:
XP_051517935
LinkDB
All DBs
Position
29:38492721..38497003
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AA seq
564 aa
AA seq
DB search
MTLTIVRVHVEVLSLITWRDMSQSKPDERLALELSCPICLQLYRNPVTLPCGHNYCLSCI
QNAAGTEDPKNPRRCPECREEYGSPETLPKNFKLSGIVDGYLAATSNGGLKEEPVVPCDQ
CLEDPAAAVKFCIRCEMSLCLGHLKRHEERHRSKGHILEELPIERDGKRCPVHRKVTEYL
CAQERLFLCSECVIEGAHQNHDVQTFEVAKEEMQRVLEGLGKAVSDKLQMTEVLLRNANE
RDGPVDKTEDKLVARANILLDNMSTLISTYKSLMSTAMDDELHLRGKSWQASLSDLENCH
KLLQEAHQSASKVLSESSEFLFIQRYLNIEPRVRQAANTTIPSLPTQEPSCAKHLRSTLR
TDTFHAEMSLLLECLHGMMNPLDLTFNPATAHPSLMLSTDLKTAKQCERGKNSSVGDQGE
RFSTATQVMCSQGFSAGVHMWAVEIGPGCMWSVGLCYKSILRKGDHSRLGHNTSSWRLQW
KNKKLTACHDSANMVVGDGLVVPPKRVEVTLDYEGRTVAFHSTGQAGRKQHLHTFSAIFK
DIVYPAFGIHSTSEESWITLLSGV
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcactattgtacgtgtacatgtagaagtgctgtcgctgataacgtggagagac
atgtctcaaagtaaacctgatgaacgtctagcattggagctgagctgtccgatctgcttg
cagctataccgtaatcctgtgacccttccttgtggacacaattattgcttgagttgtata
caaaatgcagcaggcacagaagaccccaagaacccgagacgttgcccagaatgtagggaa
gagtacggcagcccagaaacactgccaaagaacttcaaactcagcggtattgtggatggg
tacctggcagctacatccaatggtggactgaaagaagaacctgtagtgccgtgtgaccag
tgtctagaagatcctgcagctgctgtaaaattctgcatacgctgtgaaatgtcattgtgt
cttggccacctcaagcggcatgaggaacggcaccgttctaaagggcatatattggaggag
ctgcccatagaacgagatggaaagagatgcccggtgcacaggaaggtaacggaatatctg
tgtgcacaagagagactgtttctctgctcggagtgcgtgatagaaggggcccaccagaac
cacgatgtgcagacatttgaggtagcaaaagaagaaatgcagagagttctggaagggctg
ggaaaggctgtgtctgataagctacagatgacagaagttctgctcagaaatgccaatgaa
agagatgggcctgttgacaagacagaagataaactggtggccagggcaaacattttgctg
gacaatatgtctacattgataagcacatacaagagtcttatgagcactgcgatggacgat
gaacttcatttgcgtggcaaaagctggcaggccagtctgagtgatttggagaattgtcac
aagctgctgcaagaagcccaccagagtgccagtaaggttctttctgaatcctcagagttt
ctcttcattcagcgctaccttaacattgaaccaagggtccgccaggctgctaacaccacc
attcccagtctacctacccaagaaccttcatgtgccaaacacctgcgctctactcttcga
acagacaccttccatgccgagatgagtcttctactggagtgtctccatggtatgatgaac
cctctggacctgaccttcaacccagccacggcccatcccagccttatgctgtctaccgat
ctcaaaacagccaagcagtgtgagagagggaagaacagcagtgttggagaccagggtgag
cggttctctaccgcaactcaggtcatgtgctcccaaggtttctctgcaggagttcacatg
tgggcagtggagatagggcctggatgtatgtggtcagttggactgtgctacaaaagcatc
ctgcgtaaaggtgatcacagcaggctggggcataacaccagctcctggaggttgcagtgg
aagaacaaaaagttgacggcatgccacgattctgctaatatggttgtaggtgacgggctg
gttgtgccaccaaagagggttgaagtgaccctggattacgaaggaagaactgttgctttc
catagcacaggacaagcaggaagaaagcagcatcttcatacatttagtgccatattcaag
gatatagtgtatcctgcatttgggatccactctacctcggaggagtcttggatcacactt
ttgagtggagtttga
DBGET
integrated database retrieval system