Myxocyprinus asiaticus (Chinese sucker): 127420918
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Entry
127420918 CDS
T08782
Name
(RefSeq) thrombospondin-3b-like isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04145
Phagosome
masi04510
Focal adhesion
masi04512
ECM-receptor interaction
masi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127420918
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127420918
09144 Cellular community - eukaryotes
04510 Focal adhesion
127420918
09142 Cell motility
04820 Cytoskeleton in muscle cells
127420918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
masi04131
]
127420918
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
masi04147
]
127420918
00536 Glycosaminoglycan binding proteins [BR:
masi00536
]
127420918
Membrane trafficking [BR:
masi04131
]
Endocytosis
Phagocytosis
Opsonins
127420918
Exosome [BR:
masi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127420918
Exosomal proteins of colorectal cancer cells
127420918
Exosomal proteins of bladder cancer cells
127420918
Glycosaminoglycan binding proteins [BR:
masi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
127420918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
cEGF
EGF_3
EGF
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
127420918
NCBI-ProteinID:
XP_051519490
LinkDB
All DBs
Position
30:complement(35221249..35248344)
Genome browser
AA seq
955 aa
AA seq
DB search
MMEWRTVVPNLLVFYVLFFGKFSESSELKVINMLELHDARQTAAAIENLAGALQTVGDLY
ITSTFMLPPKLGGVLFGIYDKVDNKKYLEIAVIGKINKLLVRYLRSDGKAHAVNLQNPVL
AEGRSQSLILRVSGLKRSHVNLELYVNCRLVDSALGLPSFAGLPSEAESVDIRTGQKSYA
RIQGSVESVKMALGGSLATAGLLIHCPFQGDSAINNAVTSDINAILGDHTKALIGQLIIF
NQIMGELREDIREQTKEMSLIRNTILECQVCGFHEPQSCCQPNPCYSGVTCMESMMYPGY
RCGPCPNGMTGNGTHCQDIDECAAQPCFSAELCVNTAKGFTCRPCPSGFTGPTHSGMGFE
FAESHKQECVDIDECADHSSACVPNSVCVNTKGSFKCGQCKAGFMGNQTVGCFARQTCAT
LGYNPCDVNAQCVMGRNSDISCVCNVGWAGNGNICAPDSDIDGYPDEPLPCIDNDKHCRA
DNCVNTPNSGQEDTDGDGIGDECDEDADGDGIKNVEDNCRLVPNKDQQNSDTDSYGDACD
NCPNVPNGDQLDTDGNGKGDICDTDIDGDGIPNDLDNCPKRPNPMQTDRDGDSVGDACDS
CPEVNDPLQSDMDNDLVGDVCDTNKDMDGDGYQDSRDNCPEVPNSSQLDSDNDGIGDKCD
DDDDNDGIPDILPPGPDNCRLIPNPSQKDSDASGVGDVCETDFDNDKVKDLLDVCPESAE
VTMTDFRAFQTVILDPEGDAQIDPSWVVLNQGMEIVQTANSDPGLAVGFTAFSGVDFEGT
LHVNTATDDDYMGFIFGYQDSSSFYVVMWKQTEQTYWQNLPFKASAQPGLQLKAVKSRTG
PGGYLRNALWHTGDTPGEVTLLWKDPRNVGWKDKTSYRWHLIHRPQVGYIRLKLFEGTAL
VADSGVVIDTTMRGGRLGVFCFSQENVIWSNLGYRCNDSIPDDFMLYQKQTNLRT
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgatggagtggaggacagttgtgccaaacctgcttgtgttttatgttttgttttttggc
aaattctccgaatcgtcggaattgaaagtgattaatatgttagagctacatgatgctcgt
cagacagctgctgctatagagaatcttgcaggagctctgcagacagtaggagatctgtac
atcacctccaccttcatgctgccacccaaacttggtggtgttttgtttggcatctatgac
aaagtggacaacaagaagtacctggagattgctgtcataggcaaaatcaataaattactg
gtgcgatacttgcgatctgatgggaaagctcatgctgtcaatttacaaaatcctgttctt
gctgagggacgctctcagtctcttatactcagagtgagtgggcttaaacggagccatgtt
aacctagaactgtacgtaaactgccggttggtcgactctgctctgggtcttccctcattt
gctgggcttccatcagaggccgaatctgtggatattcgcactggacagaagtcttatgct
aggatacagggttcagtagagtctgttaagatggctcttggtggctctctggctacagct
ggcctccttattcattgtccattccaaggagattcagctataaacaatgcagtaaccagt
gacattaacgccatccttggtgatcacaccaaagcactgattggccagctcattattttt
aaccagatcatgggagagctgagagaggatatcagagaacagactaaagagatgtctctc
atcaggaacaccatcctggaatgccaagtgtgtgggttccatgagcctcagtcgtgctgt
cagcctaacccctgctatagtggtgtaacctgcatggagagcatgatgtacccagggtat
cggtgtggcccatgtcctaatggcatgactggcaacggaacacactgtcaggacattgat
gagtgtgctgctcagccgtgtttctctgcagagttgtgtgtgaacacagctaaaggcttc
acctgtaggccctgtccctctggattcacaggtccaacacacagtgggatgggttttgag
tttgccgaaagccacaagcaggagtgtgtcgacattgatgagtgtgctgatcactctagt
gcatgtgtgcccaactcagtgtgtgtcaatacaaagggatctttcaagtgtggccagtgc
aaagcaggatttatgggtaatcagactgttggctgttttgcgaggcagacatgtgctact
ctgggctataacccctgcgatgtgaacgcacaatgtgtcatgggccgcaacagtgacatt
tcatgtgtgtgtaatgttggctgggcaggcaatgggaatatctgtgctccagactcggac
attgatggctaccctgatgaacctcttccatgcatagacaatgacaagcattgcagagca
gataactgtgtgaatactccaaactctgggcaagaggacacagatggagatgggattggt
gatgagtgtgatgaggatgcagatggagatggaattaaaaatgttgaggacaattgtcgt
ctagtgcccaataaggatcagcagaactctgacacagactcgtatggtgacgcttgtgat
aactgccctaacgttcccaatggagatcagcttgatactgatggcaacggaaagggagac
atctgtgacactgatattgatggagatggtatccctaatgatttagataactgtcctaag
aggcccaaccccatgcagacagaccgagatggagacagtgtgggggatgcgtgtgacagt
tgtcctgaagtcaatgacccattgcagtcggatatggacaacgacttggtgggagatgta
tgcgatacaaacaaagatatggatggtgacggatatcaagactcgagggataactgccct
gaagtgcccaacagttctcagcttgactcagataatgatggcatcggagacaagtgtgat
gatgatgatgataatgatggaattccagacatccttcctcccggcccagataactgcagg
cttattcccaaccccagtcagaaagactctgatgccagtggagttggtgacgtgtgtgag
actgattttgacaatgataaggtgaaagacttgttggatgtatgtcctgaaagtgctgag
gttactatgacagactttagggcattccagacggtaattctcgacccagaaggagatgct
cagatcgaccccagctgggtggtgctaaatcagggaatggagattgtgcagacagcgaac
agtgaccctggtttggctgtgggcttcacagcattcagtggtgttgattttgagggcacg
ctccatgtgaacaccgccactgatgatgattacatgggcttcatctttggctatcaggac
tcttcaagcttctatgtggtgatgtggaaacagacagaacagacgtactggcagaattta
cccttcaaagcatcagcgcagcctggattacagcttaaggcagtaaagtcgcgtacaggc
cctggtgggtatctacgtaatgccctgtggcacacaggtgacacacctggggaagttaca
ttgctttggaaggacccaagaaatgtgggttggaaagataaaacgtcctatcgttggcac
ctcattcaccgcccgcaggtgggctacataaggttgaaattgtttgagggcacagcattg
gtggcagattcaggagttgtgatagacaccactatgagaggcgggcggctgggcgtcttc
tgcttctcccaggagaacgtcatatggtctaatcttggctatcgatgcaacgattccata
ccagatgacttcatgctgtaccagaaacagacgaatctgaggacataa
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