Myxocyprinus asiaticus (Chinese sucker): 127421290
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Entry
127421290 CDS
T08782
Name
(RefSeq) nuclear pore complex protein Nup153-like isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03013
Nucleocytoplasmic transport
masi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127421290
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
127421290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127421290
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127421290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
zf-RanBP
Nup_retrotrp_bd
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
127421290
NCBI-ProteinID:
XP_051520155
LinkDB
All DBs
Position
30:15988649..16013459
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AA seq
1458 aa
AA seq
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MAATGGGKIRSRRYHITSKPYAKGKQQQPGLISRVTDTVKSIVPSWLQKYFKNGEVAEGE
GAAVGVEQNNVAPPPNGNDDGAPHPDGRDSPEPSTSNTEPSTSRASLNFHDALSRPPLNR
THLQFPSLDGSPALEGSSFLFSQPSTSTAPFSGSPFAVTSNFSLVKEIKDSSSQHEDDNI
STTSGFSSRASDKDVPTSKTVPLLWSPETERTHSASQLSQSGIKKPAFNLSVFGTSSSSV
LNSSVLNSSQLGNSPFYPGKTTYGGAAAIRTARTRPATPYQPPVRRQIKAKPAGAQPCGV
TSATARRILQSLERMSSPLADAKRIPSTVSSPLSTSLNHTDLDISNFQSKRKRLESSVPP
VQKLVVPAAAAVSGNRSMSFRPSLTPGGVNRVFEKTNRENPARQSPPISDQAPPPSTSSL
SYPLSSTPAASSSGSGGGKMKRERTARPSTKRLDDEVAEEPDLPPASLPSNFTLPSFSFS
SPPPTFSLTSSTTPLTTVSKGPAANKEPAAPSSPPSVPFTFSSPFVKATAASPPSFSPSS
GFTFSAPTMKTGLSFSNGNITPTVVPVKSAASEEKEIEEPFKPAKVLKQGSVLDILKGPG
FSSPSQSSADKPLQTASLTQSTTSAPLSGFGDKFRPPAGSWSCGTCLLQNKSSDNKCVAC
LAPQPITDSKLDSKPAKTSASISSLFAPPAGSWECDTCLVSNKPEVVKCVACDTAKPGTG
VKSSLTLPALSETTSTPFAAPSASSITTVSTTSTATGLLGFGDKFKKPQGAWDCDVCCVQ
NKAQDVKCVACQTPKPGAVATLAPTPASAPASTAAPLLGFGDKFKKPEGSWDCEVCCVQN
KAEDQKCVACQSAKPGAKVESKGFSSFGIQSNSTDSSSCGFKFGTGSMDSTSAGLKFGGT
FSDSSNTGGFKFGLGSSGDSTSNSGSFKFGVSSSDASSGGIKLVSTSSETTAASTSSTGG
FNFGSSLTTTLASTNEEKVAESQDSSAGFKFGGSGGITFGSENSGFSFGAKPIEKTSSNS
SFSFSVPESKAKKDDAPAPSETVSTTTTTTAANTITTTTTAANTIPDFGKVTESSPSAPK
FRGPAAKEPTRVTSPFTFGKPEEKKDASMPSVTFLFNSAKDAEKSTASLGFSFSKLDPPK
DLHKTTFAFGKPAESTEPPKPSFGFGQSVADTTALKPAFGFMANSSSTPASSSSTPSLFG
TPTTSSLVPNPAPTSTFIFGQNSSSEPAPAKTFVFGQQQDSQPAPSVAPTTAQPFQFGSG
SNSAAPAFTFGAAASSTPASAAPASSANHSPFVFSSATPSSGFGTGQTPIFGQGTSQSSA
PVFGLAAPSFPATASPAPAFGAKPSSAHVFGQQANPTSTFGSAAASTGQGGFQFGSTGGF
GSSGSSSGVFAFAAGSAAPATPAASPAMSTLNAPTGGFSFGQSPTFNIGSAKSPFPPTPS
GQNSIAGRKIKTAVRRRK
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgacaggaggagggaaaatcagatcaagaagatatcacatcacttcaaaacca
tacgccaagggcaaacagcagcagccaggcctgatcagtcgagtgaccgatacagtgaag
agcatagtcccctcctggctgcagaaatacttcaaaaatggagaagttgcagagggtgaa
ggagctgcagtcggtgtggagcagaacaatgtggctcctccccccaatggcaatgatgat
ggtgccccacacccagatggacgagactctccagagccgagcacaagtaacacagaacca
tctacaagcagggcatcactgaacttccatgatgctctgtcaagacccccactcaatcgc
acccatctgcaattcccctctcttgatggctctcctgcactagagggctcaagtttcctt
ttctcacagccctccacatctacagcacccttttcgggaagcccttttgctgtaacctcc
aacttttccctggtgaaggagatcaaggattccagctcccagcatgaggatgacaacatc
tctaccaccagtggcttttcgtcacgtgcatctgataaagatgtgcccacgtcaaagaca
gtgccgctcctctggtccccagagacggaacgcacccactctgcatcacagctatctcag
tctggcatcaagaaaccagccttcaacctgtcagtctttggcacttcctcatcatcagtg
ttaaatagttcagtgctgaactccagtcagttggggaattcgcccttctacccaggaaag
accacatatggaggagctgctgcgatcagaacagctcgtacacgtcctgctaccccttac
cagcctccagttaggagacagataaaagcaaagccagctggagctcaaccttgtggagta
accagtgctacagctagacgcatccttcagtccctggaacgcatgtccagccctcttgct
gatgcaaaaagaattccatctacagtttcttcacctttgtcaacatcactgaatcacaca
gaccttgacatttcaaatttccagtcgaagaggaaaaggctggagtcatcagtccctcct
gtgcagaagctggtggtcccagcagctgctgcagtgtctggtaaccgttcgatgtccttc
agaccatcactcaccccaggtggagttaacagagtcttcgaaaaaaccaacagagagaat
cctgcaagacaatcccctccaatttcagatcaggctccccctcccagcacgagcagtttg
tcctaccccttgtccagcaccccagcggccagcagctctggttcaggagggggcaaaatg
aagagagaaaggaccgcaagaccttctaccaaacgacttgatgatgaggttgctgaagaa
ccagacttgcctccggcctcactccccagtaatttcacattgccctcctttagtttctcc
tctcctcctcccaccttctcactgacctccagcacaacaccacttacaactgtctctaaa
ggtcctgcagcaaacaaggagccagctgcaccatcctcacccccatctgtccccttcacg
ttttcttcaccttttgttaaggcaacagctgccagtcctccatctttttctccatcatct
ggattcaccttcagtgcacctaccatgaaaacaggactctctttctccaacgggaatatc
accccaacagtagtgccagtcaaatcagctgccagtgaagaaaaggagattgaagaaccc
ttcaaacctgcaaaagtcttaaaacagggcagtgtgctggatatactgaagggacctgga
ttttcgtccccttctcagagctcagctgacaaacccttacagaccgcatcattgacgcag
agtacaacctctgctcctctttctggttttggtgataaatttagacctcctgcaggatca
tggagctgcggcacttgcctgttgcaaaacaagtcctcagacaataaatgtgtggcttgt
ctcgcaccacaacccattacagactctaaattggacagtaaacctgctaagacctctgca
agcatcagttctctctttgcccctccagctggtagctgggaatgtgacacatgtctggtc
agcaacaaaccagaagtggttaaatgcgtagcttgtgacacagccaaacctgggactgga
gtaaaatccagcctgactctaccggctctctctgagaccacatccacgccctttgctgcc
ccttcagcctcctctataaccactgtgagcaccacttctacagcaactggactgttaggg
tttggggacaaatttaagaaaccacagggggcttgggattgtgatgtgtgctgtgttcaa
aacaaggcgcaggatgtgaaatgtgttgcctgtcagacccctaaaccaggagctgtagcc
acactggccccaactcctgcctctgcacctgcaagcactgctgcacctttgttaggtttc
ggagacaagttcaagaaacctgaagggagctgggattgtgaggtgtgctgtgttcagaat
aaggcagaggaccagaagtgtgtggcctgccagtcagcaaaaccaggagctaaagtagaa
tccaaaggttttagttcttttggcattcagtccaacagtacagactcgagctcatgtggt
ttcaagtttggtaccggctctatggactcaacctctgctggactaaagtttgggggcact
ttttcagattcttccaacacaggaggatttaaatttggattggggtcctctggtgactcc
acctcaaattcaggatccttcaaatttggagtctcttcctcagatgcctcttctggtggc
atcaaacttgttagtacctcctcagaaaccacagcagcaagcacaagttcaacagggggc
tttaattttggtagttctttgaccacaactcttgcatcaacaaatgaagagaaggtggct
gagtctcaggattctagtgcgggatttaaatttggtggcagtggtggaatcacttttggc
tctgaaaactctggattttcatttggagctaaacctattgagaaaacaagttccaattca
tcatttagtttctcagtgcctgagtccaaggcaaagaaggatgatgctcctgctccctca
gaaaccgtttcaaccaccaccacaacaacagcagcaaacaccatcaccaccacaacaaca
gcagcaaacaccatccctgattttggcaaagtaactgaatcttctccatctgccccaaag
tttaggggaccagcagctaaagagccaacacgggtgacgtctcccttcacctttggaaaa
ccagaagagaaaaaggatgcctccatgccctctgttacgttcttattcaattctgccaag
gacgctgagaaatcaacagcatccttgggcttctctttcagcaagttggaccctccaaaa
gatcttcacaagactacatttgcatttggtaaacctgctgaatcaacagaacccccaaag
ccatcgttcggttttggacagagtgtggcagacactactgctctaaagccagcttttggc
ttcatggccaactcttcaagcacccctgcttcctccagctccacccccagcctttttggc
acccccactacttcttccctggtccccaaccctgctccaacaagtacctttatatttggt
caaaattcctcctctgaacctgccccagcaaagacttttgtgtttggacagcagcaggac
agccagccagcaccttctgttgcacctaccacagcacaacctttccaattcggctcaggc
tcaaactcggccgcccctgctttcacctttggtgctgctgcgtcctccacgccagcctct
gctgctcctgcttcctctgccaaccattccccatttgtcttcagttctgccacaccctca
tctggctttggcactgggcagacccccatctttggacagggaacgtctcagagcagtgct
cctgtgtttgggttagcagcaccttcatttccagccacagcctccccagcccctgccttt
ggagccaagcccagttctgcccatgtatttggccagcaagccaaccctacatctacattt
ggatctgctgctgcctccacaggccaaggagggtttcagtttggaagcactggtgggttt
ggatcatcagggagcagcagtggtgtgtttgcttttgccgctggatcagcagctccagca
acacctgcggccagtccagccatgtccaccctaaatgctcccactggaggattcagcttt
ggtcagagccctacctttaatattgggtcagcaaagagtccattccccccaacaccatct
ggacagaattcaattgccggacgcaaaatcaaaactgctgttcgacgcaggaaatag
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