Myxocyprinus asiaticus (Chinese sucker): 127421314
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Entry
127421314 CDS
T08782
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1-like isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04145
Phagosome
masi04814
Motor proteins
masi05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127421314
09142 Cell motility
04814 Motor proteins
127421314
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
127421314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
masi03036
]
127421314
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
masi04812
]
127421314
Chromosome and associated proteins [BR:
masi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
127421314
Cytoskeleton proteins [BR:
masi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
127421314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
Beta-prop_EML
WD40_Prp19
WDR55
Dynein_IC2
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
EIF3I
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_SPT8
PCM1_C
Motif
Other DBs
NCBI-GeneID:
127421314
NCBI-ProteinID:
XP_051520263
LinkDB
All DBs
Position
30:complement(19666898..19785936)
Genome browser
AA seq
637 aa
AA seq
DB search
MADKSDLKAELERKKQRLAQIREEKKRKEEEKKKKETETQQNAETATEDSDLDRKRRETE
ALLQSIGISPEPPLVPTLMSPSKSMSTPSETGSQDSVDGATAGRTLQWDTDPSVLQLQAD
SELGHRTHRLGPSKITQVDFLPREVVSYSKATQTPLAAHQSEEDEEEDEEVTELKAGPET
DQQEEEETIDTKEGHPRELTEEEKQQVLHSEEFLIFFDRSIRVMERALAEDSNIFFDYSG
QDLEDKEGDLQGGSSLSLNRLFYDERWSKHRVITCLDWSPQYPELLVASYNNNEDAPHEP
DGVALVWNMKFKKTTPEYIYHCQSPVVSVGFARFHPNLLVGGTYSGQIVLWDNRSHRRTP
VQRTPLSAAAHTHPVYCVNLVGTQNANNLITVSTDGRMCSWSLDMLSQPQESMELVYNKS
KPVAVTGMAFPTGDVNNYIVGSEEGTVYTASRHGSKAGIGEIFEGHQGPVTGISCHSAVG
PVDFSHLFVTSSFDWTVKLWSTKQNKPLYSFEDNADYVYDVMWSPVHPSLFASVDGMGRL
DLWNLNNDTEVPTSSVTIEGAPALNRVRWAAGGKEVAVGDSEGRVWIYDVGEISYEETIV
LLAMPHSEDWARFARTLMEIRANRGDNEEEGPVELAG
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggctgataagagtgacttaaaagctgaacttgagcgcaaaaaacagcgccttgctcaa
atcagagaagaaaaaaagagaaaggaggaagaaaaaaagaaaaaagagacagagacccaa
cagaatgcagaaactgccactgaggactcggatttggaccgtaaacgcagggagacggag
gcccttctccagagtattggaatctcacccgaacctccattagtcccaacactaatgtcc
ccatcaaagtctatgagcacacccagcgagacaggcagccaggactcggtggatggcgca
actgctggcaggaccctgcagtgggacactgacccctctgttctccagctgcaggcagac
tctgagctcgggcaccgaacacacaggttggggccatctaagataactcaggtggacttc
ctgcccagagaagtggtctcctacagtaaagcgactcagacacctttagcagcccatcag
tctgaagaagatgaagaagaggatgaggaggtcacagagctgaaagctggcccagagact
gatcaacaggaagaggaggaaaccatcgacaccaaggaaggccacccgcgggagctgacg
gaggaggagaaacagcaggttctgcactcggaggagttcctcatcttttttgatcgcagt
attcgtgtgatggagagagcattagctgaggactccaacatcttttttgactacagtgga
caagatctggaagataaagagggagatctgcagggtggctccagtctctccctcaatcgt
ctgttctatgatgagcggtggtcaaagcatcgggtcatcacgtgtctggactggtccccc
cagtatccagagctcttggtggcctcctacaacaacaatgaagatgcccctcatgagcca
gatggtgtggctttggtgtggaacatgaaattcaagaagaccacgccagagtacatctac
cactgccagtctccagttgtgtctgtgggttttgctcggtttcatcctaacctgttggtg
ggtggcacatactctgggcagattgttctctgggacaacagaagccacaggagaacacca
gtccaaaggacccctctgtctgctgctgcacacacacaccctgtgtactgcgtaaatttg
gtcggcacccagaacgccaacaacttgatcactgtgtccacagatggcaggatgtgttcc
tggagtttggatatgctgtcacagcctcaggagagcatggagctggtgtataacaagtct
aagccagtggccgtgactgggatggcctttcctactggagacgtcaataattatatagtt
ggcagtgaggaaggaacggtgtacacagcatccagacatggcagtaaagctgggatcggt
gaaatttttgagggacaccaggggccagtgacaggcatcagttgtcacagtgctgttggc
cccgtcgacttttcccacctgtttgtcacctcatccttcgactggacagtaaagttgtgg
agcacaaagcaaaacaagccgctctactcctttgaggacaatgcagactatgtctacgat
gtgatgtggtcacctgtgcacccctcgctcttcgcatccgtggacggcatgggtcgtctg
gatctgtggaacctgaacaatgacactgaggtgcccacctctagtgtgactatagaggga
gcccccgctctaaaccgtgtcaggtgggccgctgggggcaaggaggtcgccgtaggagac
tcagaggggcgtgtttggatatatgacgttggagagatttcatatgaggaaactatagtt
ttgctggccatgccccatagtgaggactgggcccgcttcgcccgcacgctgatggagatc
cgcgccaaccggggtgataatgaggaggagggacctgtggagctggcaggataa
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