Myxocyprinus asiaticus (Chinese sucker): 127421732
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Entry
127421732 CDS
T08782
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04270
Vascular smooth muscle contraction
masi04625
C-type lectin receptor signaling pathway
masi04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
127421732
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
127421732
09153 Circulatory system
04270 Vascular smooth muscle contraction
127421732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
masi04131
]
127421732
Membrane trafficking [BR:
masi04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
127421732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
127421732
NCBI-ProteinID:
XP_051520763
LinkDB
All DBs
Position
3:51422861..51535115
Genome browser
AA seq
1448 aa
AA seq
DB search
MSGTQSTLAERFPKKASRTGSILSKDHPPDKKPKSDKASVPTSHEFDPTDLTVQSVVADG
RPESCGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIKVNGTL
VTHSNHVEVVKLIKSGSYVALTVLGRPPGLPQIPLSDGEGEEGPLSLLTSPHSPGPIVPD
RSSSSPSPSERKPAPLSVWAMTEEYGRNPTPKLLKEIQEAKKHIPQLQEQLSKPMGTGQD
GSLSPRPSEGELEDGRGDSDQPPSWQGDAGTELSWTDNTTSPVTPSLVPESPCQRETPCH
SPKTTPRDSLNSCPSPDAEDTPDLESQSSVGSPSTRVVPSIIGAEDDDFDTEQEQMNGQC
SCFQNIDLLKSRPAHLAAFVHHVVSQFDPAPLLCYLYAELYKQTSSKETRRILMDTFFID
KTASLKVTVPESIIADLERTAHSVNAERRRPEPISEDTHRQYVQQLQDTLLPDIQKNLED
FRHKRSMGLTLAEAELTRLDTERMKDRVALEKERSCAEHIISKIEDVLLTSQATEEDKCS
TMQFVILSYMKQLGVKVKESRGLDHKPKLMNLFPKIKKSIKPEKDGSEEKSKKPRFSSVF
PPRRPSRIDASSLSKALEPKQRSQKPQLPLGAGEQADGSSPSVRGSQSSEGSDGTAALVT
SPPHSAPATQSTDSISRDSDTGGVPFSALPRLGDGAVSGDPQDTSSSNTHFDFSPCILEH
LQEEEPETEKTQDTGTPRPDRSRMEPLGSGDVQSEDDQVAEVELEHPHWQTLVSRDVLAT
LTPQEIKRQEVINELFYTERAHVRMLRVLDSVFHQPLSRETILPPADIKNIFTNLDEILQ
LHISLMEQMTAVRKKTETVVIDSIGDDLLSWFSGEEEEKVKRAAGTYCSNQPFALELIKS
KQKKDQRFNSFIQEAESNRNCRRLQLKDIIPVETQRLTKYPLLLENIAKYTENPEERSKV
KQAGECCRKILTHVNQEVKEAENKQRLEDYQRRLDLSSLKQSENPMIAEFKNLDLTKRKM
VHEGPLSWKVNKDKTIELYTLLLEDILVLLQRQDEKLILKCHSKNLAGTAETKHIFSPII
KLSTVMVRSVATDNRSFFVISMSDNGAQIYELMAQTVSEQRTWQCLITQRADCMQTKLQN
IIPLPQTDGEREEVELMNSGVQKLKDSEPISLGSIQTPEKDGTEVMQTPPVSTNPFETKS
DEEEEEEESSLQDQGEDDEAFVVADLTERLTFLKQRSRLGIAIDEDEAEAFELQPLRADE
ALRTLAALRQLLINHMSSQEDTDRDTERAEQHMQRTDSQQGTQDNAVNASSVENGSERTD
RGETRVENTQELPSGDTGFFETPEDCAGSFMVLEVYGGSGESSTDDDVHGSSGEPVAGGD
SGIDLKKLLSSSSQSSGGPNLNRQIMTYIRLLQANLLHLKDIEIKYNQLHQRLSEETATD
TEENKDKS
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcacacagtccacgcttgctgagaggtttcccaaaaaagcgagcaggacagga
agtattctcagcaaggaccatcccccagacaagaagcccaagagcgacaaggcatcagtc
cccacctcgcatgagtttgaccccacagatctgactgttcaaagtgtagtagctgacgga
aggccagagtcatgtgggcttgtgcagcgttgtgttatcatccagaaagatgagaatggc
tttgggctgacagtgagtggagataaccctgtgtttgttcagctagtaaaagaggatgga
gctgccatgcgagctggtgttcagacaggcgaccggatcataaaggtcaatgggacatta
gtaacgcattcaaatcatgtagaagtcgtaaagctaataaaatcgggttcctatgtagcc
ttgaccgtgttggggagaccaccgggactgcctcagatccccctgtcagacggtgagggt
gaagaggggcctctttccttgctcacctcccctcattcccctggacccatcgttccagac
cggtcctcttcctcgcccagcccctcagagcgcaaaccagcccctctgtctgtatgggcc
atgacggaggagtacggcaggaaccccactcctaaactactgaaggaaatccaggaagcc
aaaaagcacattccacagctccaggagcagctgagtaagcccatggggactggacaggat
ggctccttatctccaaggccaagtgaaggagagctagaggatggacggggggactcggat
cagcccccttcctggcagggcgatgctggaacagagctgtcatggaccgacaacacaaca
agccctgttactcctagtcttgtcccagagagcccatgccaaagagagaccccctgccac
agcccaaagaccacacctcgagacagcctcaactcctgcccttcaccggatgctgaagac
acgcctgacctagagtctcagtcaagtgtggggagcccctccactcgtgtggtcccaagt
atcattggtgctgaggatgatgactttgacacagagcaggaacagatgaatggccagtgt
agctgttttcagaatatagacctcctgaagtctcggcctgctcacctggcagctttcgtc
catcatgtggtctctcagtttgaccctgcgccgctgctgtgctacctctatgctgaactc
tacaagcagaccagctccaaagagacacggcgaatcctcatggataccttcttcatagac
aaaacagctagtttgaaagtgacagtgcctgaatctatcatagctgacctggagcggact
gcacactcggttaacgccgaaaggaggaggcccgagcctatctcagaggacacccacaga
cagtacgttcagcagctgcaggacacacttctacctgacatccagaaaaacctagaggac
tttaggcataagcgcagtatgggtctgacacttgcagaggcggagctgacccgtctagac
actgagagaatgaaagaccgtgtggctctagagaaagagcggtcctgcgcagagcacatc
atctccaagatagaggacgtattgttgacgtcacaggccacagaggaagataagtgtagc
accatgcagtttgtgatactgtcatatatgaagcagttgggtgtaaaagtgaaggagtct
cgagggctggatcacaagcccaaactaatgaaccttttccctaaaataaagaagagtata
aaacctgagaaagatggaagcgaggagaaatccaagaaaccaagattttctagtgtcttc
cctccaaggcggccgagcaggattgatgcttcatcactcagcaaggctctggagccaaaa
cagcgctcgcagaagcctcagctgccattgggcgctggggagcaggcagacgggtcatct
ccttcggtacggggcagtcagtccagtgagggctcagatggcaccgctgctctggtcacg
tcacctcctcacagtgcaccagcaacacagagcacagacagcatcagccgagactctgac
actggtggagttcccttttcagcattgcccagactgggagacggtgctgtctcaggagac
ccgcaggacacatcttcttcaaacactcactttgacttcagcccctgtatcctggaacat
ctgcaggaggaggagcctgagacggaaaagacacaggacacagggacccccaggcctgac
cggagcagaatggagccgctgggctctggagatgttcagagtgaagatgatcaggtagct
gaggtggagctggagcatcctcactggcagacgctggtgagcagagatgtgttggccaca
ctcacccctcaggaaatcaagagacaggaagtcatcaatgagttattctacactgagaga
gcacatgtgaggatgctgagggttctggatagtgtgtttcaccagccgctgagcagagag
accatcctgcctcctgcagacatcaaaaacatcttcaccaacctcgatgagatccttcag
ctgcacatatccttaatggaacaaatgacagcagttcggaaaaagactgagacggtggtc
attgactcaataggagacgatctgctgtcctggttcagtggggaagaggaagagaaggtc
aagagagcagcgggcacatactgcagtaatcagccttttgccctggaactcatcaagagc
aaacagaagaaagaccagcgcttcaactccttcatacaggaagcggagagtaaccggaat
tgccgcaggctgcagttgaaagatattattcctgtggagacgcagagactcacaaagtat
cctcttctgctggagaacatcgccaaatacacagagaacccagaggagagaagtaaagtg
aaacaggctggtgagtgctgcagaaagattctcactcacgtcaaccaggaggtgaaagaa
gctgagaacaaacagaggttagaggactaccagagacgactggacctgtcctcactgaag
cagagcgagaatcctatgatcgctgagtttaagaacttggacttgactaagaggaaaatg
gtgcatgaaggacccctatcctggaaagtcaacaaagacaaaacaattgagctgtataca
ctgctgctggaggatatcttggtgctacttcagcggcaggatgagaagttgatcttaaaa
tgccacagtaagaatctggctggaactgctgagaccaaacacatcttcagccccatcatc
aaactcagcacagtgatggtgcgctcggtcgccactgacaacaggtcattctttgtgatc
tcaatgtctgataacggagcccagatctacgagctaatggcacagactgtatctgagcag
aggacgtggcagtgtcttatcacacaaagagcagactgcatgcagaccaaactacaaaac
atcattccattacctcagacggatggggaacgtgaagaggttgagttgatgaactctggt
gttcagaaacttaaagactctgagcccatttccttagggagcattcaaactccagaaaaa
gatggcaccgaggtcatgcaaaccccaccagttagcaccaatccgtttgagaccaaatca
gatgaggaagaggaagaagaagaaagctcactacaggatcaaggtgaagatgatgaagca
ttcgtagtggctgatctgactgagagactgacattcctgaagcagcgttcgagactgggc
atcgccatagatgaggacgaggccgaagcctttgagctccagccactcagagcggatgaa
gctcttagaacattggcagcactgagacagctgctgatcaaccacatgtcctctcaggag
gacacagacagagacactgaaagagcagagcagcatatgcagaggacagactctcagcag
gggacacaggacaacgctgtaaatgcatcctcggttgagaacggctctgaaaggacagac
agaggcgagaccagagtagagaacacacaggaactgccctctggagacaccggcttcttt
gagacgcctgaggattgtgcaggcagttttatggtgctggaggtgtacggaggctctggt
gagagtagcacagatgatgatgtacatggcagcagtggggaaccagtggctggtggagac
tcaggcattgacttgaagaagctcctctcttcctcgtcccagagcagtggaggaccaaac
ctcaacagacaaattatgacttacatacgtctactacaggccaacctgctgcacctgaag
gatatagaaatcaagtataaccaactacaccaaaggctatcagaggaaacggctactgac
acagaggaaaacaaagataaaagttag
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