Myxocyprinus asiaticus (Chinese sucker): 127421977
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Entry
127421977 CDS
T08782
Name
(RefSeq) rho guanine nucleotide exchange factor 12-like isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04270
Vascular smooth muscle contraction
masi04625
C-type lectin receptor signaling pathway
masi04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
127421977
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
127421977
09153 Circulatory system
04270 Vascular smooth muscle contraction
127421977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
masi04131
]
127421977
Membrane trafficking [BR:
masi04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
127421977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
127421977
NCBI-ProteinID:
XP_051521205
LinkDB
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Position
31:23530736..23631806
Genome browser
AA seq
1399 aa
AA seq
DB search
MSDSRSTFTDRTSSILSRDHPPDKRPKSDKLPGTPTHEFDPTDVLVQKNGFVVADGRSES
CGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKQDGAAMRAGVQTGDRIIKVNGTLVTHS
NHVEVVKLIKSGSYVALTVLGRPPGSPQIPLSEVDAGFGSPGDTFVTSSNSYNAAECTSS
PLVPWVENSAPHNQRMDNSRMVSTEQQDIQGPKDKYCKAPTPKPLRVIQDAKKHIPQQQG
QINRATHEGLYLKNIEGSRWVDEDHFKGDFSPEGFWSGSSVASVQRRFYPASPDSQRDSN
CSSPKSTPRDSLNSCPSPEAENGSDLDSRFQSTVGSPSSHLIIHPEDDDFDTEQEQVNGQ
CSCFQSIELLKTRPAHLAAFLHHVISQFDPAPLLCYLYANLYKQTNSKETRRIFMDFLTF
FIDRGANLKVAVPESISSELERRRPDLIPEELHRQYIQTMQETLLPDVQRHLEDFRQKRS
MGLTLAEVELSRLDSEQLDLEKEKSCAENILSKIDDILLTSQPTEEEKSTTMQYVILTYM
KHLGVRVKEQRNLESKRVRINFLPSKLRKSCKPEKDGEEKLKKPRFPIRVPPRWPSRVES
VPAGRAGDNVKQRPQKQMSQPALGGSEPTEGGPLRGSQTIEGSDFIQSPGFTASPPYSMP
YSSLSDPSGRETEFRMSPSAVVSRLSDGLQSGDVLDIIYPSCDYIPYNMDQMDEDRDGDR
LLDVGTPKLIRRFEELQSEDDQGSDVYSDVGPPNWQQLVGRDVLAGLTPHEIKRQEVINE
LFYTERAHVRMLKVLDSVFYQKLTRDNILSPADIKNIFTNLEEIIQLHMRISDHMTVICK
KESSVIDQIGDDLLSWFSGSEEEQIKQAVSTFCSNQPFALELIKSRQKKDQRFTTFMQEA
ESNRRCRRLQLKDIIPAEMQRFTKYPLLMDNIAKYTDDSEEKDKVRRAADCCRKILNHVN
QSVKESENKQRLEDYQRRLDLSSLKQSENPMISEFKNLDLTKRKMVHEGPLSWKVNKDKT
IELYTLLLEDILVLLQKQDERLILRCHCKNLAGTADTKHIFSPIINLSTVLVRSVATDNR
SFFVISMSENGAQIYELMAQTVSEQRMWQQQITQRADVMKATLHSVIPLPQHDGDREREL
SKFSKGSECTSTGSIQSAEKDSDFSPSAALRDCVPDSNPGEDDQVQRVSQGGSYEDSELL
NGRDADSVSCSSKADEALKTLAALKQVLVTQLMAQDEGERLCRSTGSRLLRTTSLRTPVE
HSSTRTPSRAQDYTSGDTGFYECPEDYAAYLVLEGYGGSGESSTDDDIQVGRKELSLAHS
CAADSGISLKFPSPSSGSTSRLSRQVLSHIRSLQANLNHLKIRNRVAEDPGSCDDRSTTS
ILNMLHTNLSSSLNTSTQK
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atgagcgactcacggtccacattcactgacagaaccagtagcattctcagccgtgaccat
ccacctgacaagaggcccaaaagcgataagctgcccggtaccccaacacatgaatttgac
cctacagatgtgctggtgcagaagaatggatttgtggtggctgacgggagatctgaatct
tgtgggctggttcagagatgtgtaatcattcagaaagatgagaatggctttgggcttacc
gtcagtggggacaaccctgtttttgtgcagctcgtcaaacaggatggcgctgcaatgcgt
gcaggtgttcagactggggacaggatcattaaggtgaacgggaccttggtgactcattca
aaccatgttgaagtggtgaaattaataaaatctggctcttatgtggccctcacagtatta
ggccgacctcccgggtcgccccagatcccactttctgaggtagacgcaggcttcgggtca
cccggggacacttttgttacatcctccaactcttacaatgcagcagagtgcacctcttct
cctcttgtaccatgggtagagaacagtgctcctcacaaccaaagaatggacaacagtagg
atggtgtctacggagcaacaggacatacagggaccgaaggataaatattgcaaagctccg
acacccaaaccactacgggttatccaggatgccaagaagcacattccacagcagcagggc
cagatcaacagggctacacatgagggtctatatctcaaaaacattgagggaagccgctgg
gttgatgaggatcattttaagggagacttcagccctgaaggtttctggagtggaagttca
gtggcatctgtccagcggcggttctacccagcttctccagacagccaaagagactccaac
tgttccagtccaaagagcacccccagagacagtctcaactcctgcccctctcctgaggcc
gagaatggctctgacctggattctcgcttccagtctaccgtaggcagcccctcctcccac
ctaatcatccaccctgaagatgacgactttgatacagagcaggagcaggtgaatggccag
tgcagctgcttccagagtatcgaactgctcaagactcgccctgctcatcttgcagccttc
ctgcatcatgtgatctcccagtttgaccctgcacctctgctctgctacctttatgccaac
ctctacaagcagacaaactcaaaagaaactcgtcgcatcttcatggacttcttaacgttc
ttcatagaccgcggggcaaatttgaaagtagctgtgcctgaatctatttcctctgagctc
gagcggcgaagaccagacctgattcccgaggaattacacaggcaatatatacagacaatg
caggaaacgcttctccctgatgtacagagacacttagaggacttccggcagaagcgcagt
atgggcttgactctggctgaggtagagctgtctcgtctggactctgaacagctggatctg
gagaaagagaaatcatgtgcagaaaacatcctctctaagatagatgatatcctgttgact
tcacaacctacggaagaagaaaaaagcaccaccatgcagtatgtgattctcacgtacatg
aagcatctgggagttcgggtaaaagagcaacgaaacctggagtccaaacgagtccgaatt
aatttccttccttccaaactgaggaaaagttgcaaaccagagaaggatggagaggagaag
ctgaaaaagcctcgcttccccattcgagtgcctccacggtggcctagtcgtgttgaatca
gtaccagctgggagggcaggggataatgtcaagcagaggcctcagaagcagatgtctcag
ccagcattgggcgggtcagagccaacagagggtggacctctgcggggcagtcagacaatt
gagggttcggactttatacagagcccaggattcaccgcctcaccaccatacagcatgccc
tacagctcattgtcagacccctctgggagggagacagagtttaggatgagcccatctgca
gtggtttcccgactgagcgatgggctgcagtctggagatgtgctggacatcatttaccca
tcctgtgactacatcccatacaacatggaccagatggatgaagacagagatggagacaga
ctccttgatgtgggcacacctaaactgataagaaggtttgaggagctgcagagtgaagat
gatcagggcagtgatgtttactccgatgtaggtcctcctaactggcagcagctggtcggg
cgtgatgttctagcaggcctgacaccccacgagatcaagagacaagaagtcattaatgag
ctgttctacacggaacgagctcatgtgcgcatgctgaaggtcctagacagtgtgttctac
caaaaactcacccgagacaacatactgtcccctgctgacatcaaaaacatcttcaccaac
ctggaggaaatcattcaactgcacatgaggatatcagatcatatgactgtgatctgcaag
aaggagtcgtcagttattgaccagattggagacgatttactgtcttggttcagtggttca
gaagaagagcagatcaagcaagcggtgagcactttctgcagtaaccagcccttcgccctg
gagctcatcaaatcccggcagaagaaggaccagcgtttcaccaccttcatgcaggaggct
gaaagcaatcgacggtgtcggagattacagctaaaagacatcatccccgcagagatgcag
aggttcaccaaataccctttactgatggacaacattgccaaatacacagatgactcagag
gagaaagacaaagtaagaagagcagccgactgctgtcgaaaaattctgaaccacgttaac
cagtctgtgaaggagtccgagaataaacagagattggaggactaccagagacgactggac
ctttcttctttaaagcagagcgagaaccccatgatctcagagttcaagaacctggatctc
actaagcggaagatggttcatgagggtcctttgtcctggaaagttaacaaagacaaaacc
attgagctgtacacgttactactagaagacatactggtgctgctgcagaaacaggacgaa
cgtcttattctcaggtgtcactgtaagaacctagcaggaactgctgacaccaaacacata
ttcagtcccatcatcaatctcagcactgtgcttgtgcgctcagtagccacagacaacagg
tcattctttgtgatttccatgtcagaaaacggagctcagatatatgaactgatggcccaa
acagtgtctgagcaaagaatgtggcagcagcagatcactcagagggcagatgttatgaaa
gccacactccacagtgtcattcctttacctcagcacgatggggacagagagagagagtta
agcaagttcagtaaaggctctgaatgcacctccacaggaagcatccagtctgcagagaag
gacagtgatttttctccctcggcagcactgcgggactgtgtccctgactctaaccctgga
gaagatgatcaggtccaaagggttagccagggaggctcctatgaggactcagaactcttg
aacggcagggacgcagactctgtctcctgttcgtctaaagcagacgaggccctgaaaacc
ttggcagcgctgaagcaggtgctggtgactcagctgatggctcaggatgagggcgagcga
ttgtgccgatcgactggcagccgtctcctcaggacaacctctcttcgaacgccggtggag
catagctccactcgcacccctagccgagctcaggactacacctctggagacacaggcttc
tacgagtgcccagaggactatgctgcttatctggttctggaggggtacggtggctcgggt
gagagcagtaccgatgacgatattcaggttggcagaaaggagttgagtttggcccacagc
tgtgctgctgactcaggcatcagcctcaaattcccctcaccctcctcaggaagcacatct
cgtctcagcagacaggtcctctcacatatccgcagcctgcaggcaaacctcaaccacctc
aagataagaaatagagtggcagaagatcctggctcctgtgatgacaggagcaccacttca
atccttaacatgctccacacaaacctgtcttcctcactgaacacttccacccaaaaatga
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