Myxocyprinus asiaticus (Chinese sucker): 127422042
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Entry
127422042 CDS
T08782
Name
(RefSeq) Fanconi anemia group J protein isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03440
Homologous recombination
masi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127422042
03460 Fanconi anemia pathway
127422042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
masi03400
]
127422042
Enzymes [BR:
masi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
127422042
DNA repair and recombination proteins [BR:
masi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
127422042
FA (Fanconi anemia) pathway
Downstream FA components
127422042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
HBB
ARCH_RTEL1
Motif
Other DBs
NCBI-GeneID:
127422042
NCBI-ProteinID:
XP_051521337
LinkDB
All DBs
Position
31:complement(28244105..28344325)
Genome browser
AA seq
1428 aa
AA seq
DB search
MSATPVEYTIGGVKINFPCKAYPSQLAMMNSIIRGLNHGQHCLLESPTGSGKSLALLCSA
LAWQQAQYGKEQNAGTSSGDCKKPEVATPCQCVCHSRDAHATSSNMACKPPVVDLTGVGA
SAQPTTPLTKGGCTLVSAVESDQPKRSTLSSRLSEKLQASLNDGEQDDDFKTERKRIRTP
STDQKSSKRRCFERGVIYIDDDDEEDLERPVPGAQSWTMELNSGARVDSCQSLQQYCSPM
SCSVCPCTNLKAGQKMIEKAKDNEKDKEGSGRKKIPKIFFGTRTHKQITQIARELKRTLY
SSVPMTILSSRDHTCVHPKVVPHANRNERCKELLEAKNGLSCRYYHNVHKMRDQNSLQWV
HGLHQAWDIEELVRLGGKLRSCAYYAARELMQEACIVFCPYNYLLDPLIRESMEINLKEQ
IVVLDEAHNIEDCARESASFTLNHAQLLLARDEIDGMVTHNIRRDQHRPLLAFCCSLANW
VQESSSGLEDREYETSCKVWTGKEVLVIFHGFGITADTFSLLQKHLAAVLEKEERTGLVN
GREDVVQIPTISSNTQSMLKSLFMVLEFLFRQNCRFADDYRVALQQNYMWTTQQDLPDAQ
GFFARPQRRRQSTRTKTPVHTLSFWCLNPAVAFSDLSDSVRSIVLTSGTLSPMGSFSSEL
GIKFSIQLEASHVISKSQVWVGTIGVGPQGRKLCATFQHAETFAFQDEVGALILKVCHTV
SRGVLCFLPSYKMLDKLRDRWMNTGLWDKLEERKTVITEPRGGGKGDFDELLQTYYEAIS
GTAANSGNRDGALLVAVCRGKVSEGLDFTDDNARAVVTIGIPFPNIKDLQVELKMKYNDQ
HAKSRGLLPGGRWYEIQAYRALNQALGRCIRHRNDWGALILVDDRFRANPNKYITGLSKW
VRQLVRHHDTFTGAMQSLESFSQGQQRAVETFKDQHSQAAPLYSSPSLVGSTATSPTPEI
IVPQKPFVPQPTMPNLHTEVQAAVSANSESRSSESGGQKNIQHPSEPITLPNREFNIQRT
ARPIGHLFTPVSSQFKTPIFQSEHSEKTVFQDVISVDSKQSNEVVPVLTEEQNHQTSGVP
VLPVEPKHQTSGIAVLPVEPKQQTSGASLDPPPEFSEEFASSKQNTSGTELEDTKVEEEQ
SIFYSPELFEGDGEAMEETSVLEVDKSPLQTENNHSPTNGTAEVPPDDLFGSVQDKRTLS
EDLVSSTVLDHAILQGKSEQTGLNSSTDFENRPVLHNGASSSRSRRLSRSRQQRTTTSGT
SGKNVDNLVREKVPVKSQAQSQYLGNGKNRSSPPISLKPNLNQTMICCVLSKAETEQTHR
VKQLKTEGVVASGLVKSRSVVLLKQFSHARAKALVVPVNGGKRRDACKPPDQRLSGHDEF
PLVASAERLERERRPCQTDTCTTAEPLPPTPVLKDSVETPQTVATQSI
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaactccagtggagtacaccataggaggggtgaagataaactttccatgcaaa
gcgtatccctctcagctggccatgatgaattctatcattcgtgggcttaatcatgggcag
cactgtctattagagagccctactggcagtggcaagagtcttgctttgctgtgttcggcc
cttgcatggcaacaggcacagtacggtaaggaacagaatgctggcaccagctcaggtgac
tgtaagaagccagaagtggctactccatgtcagtgtgtgtgccatagccgagatgcacat
gccacttccagtaatatggcatgcaaacctccggtggttgaccttactggtgtaggtgct
tctgctcagcctacaacccctctcacaaaaggaggatgcacccttgtttcagcagtagaa
agcgaccagcctaagaggtccactttgtcttcccggctctctgagaaacttcaagcctct
cttaatgatggagaacaagacgatgatttcaagactgagaggaagcgcattcgtacacca
tccacagaccagaagagcagtaagcggagatgtttcgagcgaggagtaatttacattgat
gatgatgatgaggaagacctggagagacctgtgcccggggcacagagctggaccatggaa
ttgaactctggtgccagggtggacagctgccagtcgctgcagcagtattgttctcccatg
tcttgttctgtctgtccctgcaccaacctcaaagcaggacagaaaatgattgaaaaggcc
aaggacaacgagaaagacaaagagggaagcggtaggaaaaagatccccaagatcttcttt
ggcacacgtacccataagcagatcacgcagatcgcacgggagctgaaacgaacgctttac
tccagtgtgcccatgacaatcctgtccagccgagaccacacctgtgtccatcctaaagtg
gtgcctcatgccaaccgcaacgagcgctgcaaggagctgctggaggccaagaacggccta
tcatgccggtactaccataatgtgcataaaatgcgagatcagaactctttacagtgggtg
catgggctacaccaggcctgggacattgaggagctggtgcgtctcggtggtaagctgcgg
tcctgtgcttactatgcagctcgggagctcatgcaggaggcctgcattgtattctgtcct
tacaactacctgctggaccccctcatccgtgagagtatggaaataaatctgaaggagcag
attgtggtgctggacgaggctcataacatagaggactgtgcccgcgaaagtgccagtttc
accctgaaccacgctcagctgttgctggcacgagatgagattgatggaatggttacacac
aacattcggcgcgatcaacataggcctttgctggccttctgctgcagccttgccaactgg
gtgcaggagagctccagtggcttggaggatcgtgagtatgagacttcctgtaaagtctgg
acaggaaaggaggttcttgtcattttccatggctttggcatcacagcagacacattctca
ttgctgcagaaacacctggcagcagtgctggagaaggaggagcgaactgggctagtgaac
gggagagaagacgtggtgcagattcccaccatcagctccaacactcagtcaatgctcaaa
agcctctttatggttctggaattcctttttaggcagaactgcaggtttgcggatgattac
cgtgtggccctccagcagaactacatgtggaccacccaacaggatctacccgatgctcag
ggcttttttgcacggccccagcgtcgccgacagagcacccgtaccaaaacccctgtgcac
acgctgagcttttggtgccttaaccctgctgtggcattttcggatctgagtgattcagtg
cggagtattgtgctgacctcaggcaccctctctcccatgggctccttctcctctgaactt
ggcatcaagttctccatccagctggaggccagtcacgtcatcagcaagtcacaggtctgg
gtcggcacaattggtgtagggccccaaggtcgtaagctttgtgccacattccaacatgca
gagacatttgctttccaggatgaggtgggagccttgattttgaaagtgtgtcatacagtc
agccgtggagttctctgtttcctgccatcctataagatgctggataaactgagggaccgc
tggatgaacacaggtctgtgggacaagcttgaagagcggaagactgtgatcacggagcca
cgtggtggtggcaagggagactttgatgagctgctacagacctactatgaggccatcagt
ggaacagcagccaacagtggtaacagagatggagcactgctggtagctgtttgcagaggg
aaggtgagcgagggcttagactttacagatgataacgccagagcggtggtcactattggc
atccctttccccaatattaaagatttgcaggttgaactgaagatgaaatataatgaccag
catgccaagtcacgtgggcttctgcctggtggtcgctggtacgagattcaagcttatcgg
gcattaaaccaggcactcggaaggtgtattcggcatagaaatgattggggcgcactgatc
ctggtagatgatcggtttagggcgaatccaaacaaatacatcacaggcctgtcaaagtgg
gtgcgtcagctagtaaggcaccatgacaccttcactggcgccatgcagtccctggagtcc
ttctctcaaggtcagcagagggcagtagagacctttaaagaccaacattctcaggctgcc
cctctgtactcaagcccctcgctggtcggatccactgctacctcacccactcctgagata
atcgtcccccagaagccatttgtccctcagcctacaatgccaaacctacacactgaggtt
caggctgccgtctcagccaactctgagagcagatcttctgaatcaggtggccaaaagaat
atacagcatccatctgaaccaatcacattaccaaatagggaatttaatatccaaagaaca
gcacgacctataggccatctcttcactccggtcagtagccaatttaagaccccaatattt
caatctgagcactccgaaaagactgtttttcaggatgtaatttcagttgacagcaaacaa
agcaatgaagttgttcctgtacttactgaggaacaaaaccaccaaacaagtggtgttcct
gtacttcctgtggaaccaaagcatcaaacaagtggcattgctgtacttcctgtagaacca
aagcaacaaacaagtggtgcttcacttgaccctccaccggagttctctgaggagttcgct
tcctccaaacagaacaccagtggaactgagcttgaagacacaaaagtggaagaggaacag
agtatcttctacagccctgagctgtttgaaggagatggggaggcgatggaagagactagt
gttttagaggttgataaatctcctctgcaaacagagaacaaccattctcccactaatggc
acagctgaagtacctcctgatgatctgtttggctccgtgcaggacaaaaggacattgtcc
gaagaccttgtgagcagcactgtcctagaccatgcaattttacagggtaaatcagagcag
acaggtttaaactctagcacagactttgagaataggcctgtcttacataatggcgctagc
agtagccggtctcgtagactctccagatctaggcagcaaaggaccactacatcaggaaca
tcaggtaaaaatgttgacaacctggtcagggagaaggtgccagtgaagtcccaagctcag
agtcaatacttggggaatggaaaaaacagatcaagccctccaatctcactcaaaccaaac
ctaaatcagacaatgatatgctgtgtcctgagtaaagctgagacagagcagacacacaga
gttaagcagctgaaaacagagggagtggtggcttctggactggtaaagagcagaagtgta
gtcttgctcaaacaattcagccatgccagagcaaaggctttggtagtgccagtgaatggg
ggcaaacggagagatgcttgtaagcccccagaccagagactctcagggcatgatgaattt
cctttggtcgcatctgcagagaggttagaaagggagagaaggccttgtcaaactgacact
tgtacaacagcagagccattgccccctacacctgtactgaaagacagtgtagaaaccccg
caaacagtggctacccagtcaatctga
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