Myxocyprinus asiaticus (Chinese sucker): 127422080
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Entry
127422080 CDS
T08782
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127422080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
masi03041
]
127422080
Spliceosome [BR:
masi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
127422080
Complex C
U5 SnRNP specific factors
127422080
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
127422080
NCBI-ProteinID:
XP_051521393
LinkDB
All DBs
Position
31:complement(29073198..29092954)
Genome browser
AA seq
2342 aa
AA seq
DB search
MAAAFTYRGVPGTMPPGVPPPPPVATQIPDYMTEEKLQEKARKWQQLQAKRYSEKRKFGF
VDAQKEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQI
RDVPVLYHITGAISFVNEIPWVIEPVYIAQWGAMWIMMRREKRDRRHFKRMRFPPFDDEE
PPLDYADNILDVEPLEAIQMELDPEEDSSVADWFYEHQPLKDTTKYVNGTTYRRWQFTLP
MMSTLYRLANQLLTDLVDGNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDW
NEFNDINKIIIRQPIRTEYKIAFPYLYNNLPHHVHLNWYHTPNVVFIKTEDPDLPAFYFD
PLINPISHRHSVKSQEPLPDDDEEFELPEYVEPFLKETPLYTDNTANGIALLWAPRPFNL
RSGRTRRAIDVPLIKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLF
RSFKATKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTK
ERKKSRFGNAFHLCREVLRLSKLVVDSHVQYRLGNVDAFQLSDGLQYIFAHVGQLTGMYR
YKYKLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLG
NLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHL
SESWRCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCK
KNLGRLTRLYLKAEQERQHNYLKDGPYITAEEAVAIYTTTVHWLESRRFSPIPFPPLSYK
HDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKE
VGIEFMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVY
KWCQGINNLQDVWETAEGECNVMLESRYEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKN
NVVINYKDMNHTNSYGIIRGLQFASFVVQYYGLVMDLLVLGLQRASEMAGPPQMPNDFLS
FQDTVTESAHPIRLYCRYIDRIHIFFRFSADEARDLIQRYLTEHPDPNNENIVGYNNKKC
WPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFE
CRILPKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGS
TTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPP
VVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQ
PWESEFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYD
KGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGT
YFPTWEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQV
QLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKET
IHPRKSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDS
HDIERYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGAKPLIQQAMAKI
MKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKT
FEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLP
VEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQ
MVLFNLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTD
EEWIKVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQT
KEQSQLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVS
SDDIKETGYTYILPKNVLKKFICISDLRAQIAGYLYGTSPPDNPQVKEIRCIVMVPQWGT
HQTVHLPNQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDGEKTII
ITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMV
PGQVSWNYNFMGVRHDPNMKYDLQLANPKEFYHEVHRPSHFLNFASLQEGEIYNADREDM
YA
NT seq
7029 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgcattcacctacagaggtgttcctgggacaatgcctccaggtgttcctcca
ccacctcctgttgctactcagataccagattacatgacagaggaaaagcttcaagagaaa
gctcggaaatggcagcaactgcaggcaaaacgctactcggagaagaggaaatttggcttt
gtggatgcccagaaagaggacatgccgcctgagcatgttcgcaaaatcatcagagatcat
ggtgacatgaccaacaggaaatttcgtcatgacaagagggtctaccttggagccctgaaa
tatatgccacatgcagtgctcaaactgctggagaacatgcccatgccctgggagcagatc
agagacgttcctgtactctaccacatcacaggcgccatttctttcgtaaacgaaatccca
tgggttattgagccagtatacattgcacagtggggtgcaatgtggatcatgatgcgtcgt
gagaagagagacagacggcacttcaaacgcatgcgtttccctccatttgatgatgaagag
cctccactggattatgcagacaacattctggatgtggagcccctggaggcaatccagatg
gagctggatccagaggaagactcctctgtggcagactggttctatgagcatcagcccctg
aaggacaccaccaaatatgtgaatgggaccacatacagacgctggcagttcacattgcca
atgatgtccacactgtatcgattggccaaccagctgctgaccgatttggtggatggcaac
tacttttacttgtttgacttgaaggctttcttcacctccaaggctttgaacatggccatt
cccgggggtcccaaatttgagccccttgtcagagacattaaccttcaggatgaagactgg
aatgagttcaatgacatcaacaagatcatcatcagacagccaatcaggacagaatacaaa
attgcattcccttacctgtacaataacctgccacatcatgtgcacctcaactggtaccac
acacccaacgtggtgttcatcaagactgaggatcctgatctgcctgccttttacttcgac
ccactgatcaatcccatctctcacaggcactctgttaaaagccaagagccattgccagat
gatgatgaagaatttgaactgcctgaatacgtagagccattcttaaaggagacgcccctc
tacactgacaacacagctaatggaattgcattgttgtgggcacctcgtccatttaatctc
cgttcaggaaggaccagacgagccattgatgtccctctcatcaaaaactggtaccgtgag
cactgtcctgcaggccagcctgtgaaggtgcgagtgtcataccagaagcttctgaagtac
tatgtgctaaacgctctgaaacacagacctcctaaagcacagaaaaagagatacctgttc
cgctccttcaaggccaccaaattcttccaatctacaaagctggactgggtggaggttggc
cttcaggtgtgccggcagggctacaacatgctgaatctgctgattcacagaaagaacctc
aactatctccacttggactacaatttcaatttgaagcctgtcaagacactcacaactaaa
gagcgtaaaaagtccagattcgggaatgcgttccacttgtgtcgtgaggttctgcgtttg
agcaagcttgtggtggacagtcatgtgcagtacaggcttggaaatgttgatgctttccag
ctgtcagatgggttgcagtacatcttcgcccatgtgggtcaactgactggcatgtaccgc
tacaagtacaagctcatgaggcagatcagaatgtgcaaagacctaaagcatctcatttac
taccgcttcaacacaggcccagttggaaaaggtccaggctgtgggttctgggctcctgga
tggagagtctggctgttcttcatgagaggcatcacccctcttctggagcggtggctcggc
aaccttctggctaggcagtttgagggtcgacactctaagggtgttgccaagactgtgacc
aaacagcgtgtggaatctcactttgatctggagctgagagctgctgtgatgcacgacatc
ctggatatgatgcctgagggtattaagcagaacaaggccagaacaatcctgcagcacctc
agcgagtcatggaggtgctggaaggccaacatcccttggaaggttccaggactcccaacc
cctattgagaacatgatccttcgctatgtgaaggccaaagctgactggtggaccaacaca
gctcactacaaccgtgagagaatcaggcgaggagccactgtggataagactgtgtgcaag
aagaaccttggacgtctcactcgactctacctgaaggcagagcaggagaggcagcacaat
tacctgaaggatgggccttacatcactgctgaagaggccgtggccatctacaccaccaca
gtgcactggctggagagtcgtcggttctctccaattccattccctcctctctcatacaaa
catgacactaaactgctcatcttggctctggagagactcaaggaggcttacagtgtgaag
tcaaggctgaaccagtcacagcgtgaggagttgggtctgattgagcaggcctatgataac
cctcacgaggctttgtctagaatcaaacgtcacctcctcactcagagagccttcaaagag
gtgggtattgagttcatggacctttacagtcacctggtgccggtttatgatgttgaacct
ctggagaagatcacagatgcctacctggatcagtacctgtggtatgaggcagacaagcgc
agacttttcccaccatggatcaaaccagctgacacagagcctccacctctgctggtgtac
aaatggtgccaaggtatcaacaacctgcaggatgtgtgggagacagcagaaggcgagtgt
aacgtcatgctggagtctcgctatgagaagatgtacgagaagatagacttgacactactg
aacagacttctgcgtctcatagtggatcacaatattgctgattacatgacagccaaaaac
aacgttgtcatcaactataaggacatgaaccacaccaactcgtacggtattatccggggg
ctgcagtttgcttctttcgtcgtgcagtactatgggctggtgatggacttgctggtgctg
ggtctgcaaagagccagtgaaatggctggacctcctcagatgcccaatgacttcctcagc
ttccaggacacagtcactgagagtgcccatcccatccgcctgtactgcagatacatagac
cgtattcacattttcttcaggttctcggctgatgaggctagagatctgatccagaggtat
ctgactgagcacccggaccccaacaacgagaacattgtgggctacaacaataaaaaatgc
tggcccagagatgctaggatgagactgatgaaacatgatgtgaacttgggccgtgctgtg
ttctgggacatcaagaatcgcctccctcgttctgtaaccacagttcagtgggagaacagc
tttgtgtcagtctacagcaaggacaaccccaatctgcttttcaacatgtgcggctttgag
tgtcgcatcctgcccaagtgccgcaccagctatgaggagtttactcacaaagatggcgtc
tggaatttgcagaatgaggtaacaaaggaaagaacagcacagtgtttccttcgtgtagat
gatgaatctatgcagaggttccacaacagagtacgacagattttgatggcctctggctcc
accaccttcaccaagattgtgaacaagtggaacactgctctgattggtctgatgacctac
ttccgtgaagctgtggtcaacacgcaggagctcctggatctgttggtgaagtgtgagaat
aagatccaaacccgtatcaagattgggctgaactccaaaatgcccagccgtttccctcct
gtggtattttacaccccaaaggagctaggaggactggggatgctttccatgggacatgta
ctgatcccacagtctgacctgagatggtcgaaacagactgatgtgggcatcactcatttc
cgttctggtatgagtcatgaggaggatcagctcattcctaatctgtaccgttacatccag
ccttgggagagtgagttcattgattcccagagagtttgggccgaatatgcactcaagaga
caagaggccattgcccagaacaggcgtttgacactggaggatctggaagactcctgggac
agaggtattccacgtataaacacactctttcagaaggacagacacactcttgcctatgac
aaaggctggagagtcagaacagacttcaagcagtaccaggtgctgaagcaaaatccattc
tggtggacccaccaaaggcatgatggaaaactgtggaatctgaacaattatcgtacagac
atgatccaggcacttggaggagtggagggcattcttgagcatacattgttcaagggaacc
tacttccccacctgggaaggtcttttctgggagaaggccagtggtttcgaggagtccatg
aaatggaagaaactcaccaatgctcagagatctggtctgaaccagattcctaaccgacga
ttcactttgtggtggtctcctactatcaacagagccaatgtctatgtgggtttccaagtg
cagttggacctcactggaatcttcatgcatggtaaaattccaaccctcaagatctctttg
atccagatcttcagagctcacttgtggcaaaagattcatgagagcatcgtcatggatctc
tgtcaggtgtttgaccaagagctggatgctctggagatcgaaactgtccagaaagagaca
atccatcccaggaagtcatacaagatgaattcctcctgtgctgacattctgttgtttgcc
tcctacaagtggaacgtctcgcgtccctcgcttctagcagactccaaggatgttatggac
agcaccacaacacagaagtactggattgatattcagctcagatggggtgactatgactcc
catgacattgagagatatgccagggccaagttcttggactacaccactgacaacatgagt
atttacccatcacccactggggtcctgattgctattgatctggcatacaacctgcacagt
gcctatggcaactggttccctggagccaagcccttgatccagcaggctatggcgaagata
atgaaggccaaccctgctctgtatgtgctgagagagcgaatccgcaagggtctgcagctc
tactcttcagagcccactgagccttacctatcttctcagaactatggagagcttttctct
aaccaaatcatctggtttgtggatgacaccaatgtgtacagagtcaccatccacaagacc
tttgaagggaacttgacgaccaaaccaatcaacggagccattttcattttcaaccccaga
actggacagcttttccttaagatcattcacacatctgtatgggcaggacagaagcgtctc
ggacagctggccaagtggaagactgctgaagaagtggctgcccttatccgatcactgcct
gttgaagagcagcccaagcagattattgtgaccaggaagggcatgttggatcctcttgag
gtgcacttgttggacttccccaacattgtcatcaagggctctgagctacagctgcccttc
caggcatgtctaaaggtggagaagtttggggacctcattctgaaagccacagagcctcag
atggtcctgttcaatctgtatgatgactggctgaagacaatctcttcttacactgcgttc
tctcgtttgatcctaatcctgcgagcacttcatgtcaacaatgaccgtgccaaagttatc
ctgaagcctgacaagaccactatcaccgagccccaccacatctggcccactctgaccgac
gaggagtggatcaaagtagaggtgcagctcaaagatcttatcctcgctgactatggcaag
aagaacaatgtgaatgttgcatctttgacccagtctgagatcagggacatcattctgggt
atggagatctctgctccgtcccagcagaggcagcagatcgctgagattgagaagcagacc
aaggaacagtctcaattaacagccacacagactcgcacggtcaacaagcatggagatgag
attatcacctcgaccaccagcaattacgagacacagaccttctcctccaaaactgaatgg
agagttagggcaatctctgctgccaacttgcacttgcgtaccaaccacatctatgtgtca
tcggatgacatcaaagaaactggctatacttacatccttcccaagaacgttctgaagaag
ttcatctgcatctcagatctgcgtgcccagattgcagggtatctatatggaaccagccct
ccagataaccctcaggtaaaggagattcgctgcatagtgatggtgccacagtggggtaca
catcagactgttcacctgcccaaccagctgcctcaacacgagtacttgaaggaaatggag
ccacttggatggatccatacacagcctaatgaatcaccccagctgtctccgcaggatgtc
accacccacgctaaggtcatggcagacaacccatcctgggatggcgagaagactatcatc
atcacttgcagtttcactcctggttcctgcacgctgactgcttacaagctaacacccagt
ggatacgaatggggaaggcaaaacacagataagggtaataaccccaagggttacttgccc
tctcactacgagagagtccagatgctcttgtctgaccgtttcttgggattcttcatggtg
cctggccaggtctcctggaactacaacttcatgggtgtccgtcatgatcccaacatgaag
tacgacctacagctggccaacccgaaagagttctaccatgaagtccacagaccatctcac
ttcctcaactttgcttctctgcaggagggtgaaatctacaatgctgaccgtgaggatatg
tacgcatag
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integrated database retrieval system
