Myxocyprinus asiaticus (Chinese sucker): 127422172
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Entry
127422172 CDS
T08782
Name
(RefSeq) collagen alpha-4(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04382
Cornified envelope formation
masi04510
Focal adhesion
masi04512
ECM-receptor interaction
masi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127422172
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127422172
09142 Cell motility
04820 Cytoskeleton in muscle cells
127422172
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
127422172
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
masi04147
]
127422172
00536 Glycosaminoglycan binding proteins [BR:
masi00536
]
127422172
Exosome [BR:
masi04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
127422172
Glycosaminoglycan binding proteins [BR:
masi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
127422172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
127422172
NCBI-ProteinID:
XP_051521469
LinkDB
All DBs
Position
31:complement(35745515..35791541)
Genome browser
AA seq
1598 aa
AA seq
DB search
MSNSVRKLKVWAQGPPGPLGRQGPQGPQGIPGTPGLPGEKGQRGAIGYPGVSGQKGDQGV
KGSRGHAGLDGVPGHPGPGGAPGFPGKDGCNGTRGDRGLDGELGLPGLPGPVGLPGIKGA
KGDPSNRIVFILGKPGVDGLPGICGPRGPNGVFGPCGPPGQVGPVGFMGLPGSAGPRGPP
GDPGRSLPGPKGEEGEQGPQGEPGPFEYVEPKPEDYVKGYKGPDGCQAEKGEKGIIGFPG
PRGGLGENGLPGLFGNTGPKGYTGDPGPIGKREYYYQNVTGLPGDPGLLGATGPPGYRGM
MGIPGPPGDQGPSIIGAMGESGLQGLPGLRGEKGNPGRIQTKFLNFPGEPGKRGLPGPKG
KRGNPGSPGYYCLPGERGDPGNVGQRGRPGILGVQGRKGPDGACACEPPGDLPGRPGIPG
FPGDPGDPGRKGSPGPIGDVGPLGKRGAGGATGPRGFTGVRGIKGEKGDFTVLRMKGQKG
GRGTVGPIGPPGYSGRRGADGKMGIPGDPGPLGYNVVGLPGDRGCQGSVGAKGFRGPVGP
PGPYMMGAVGRRGQQGDPGAQGQTGPPGPKGCRGETLPCGTGILGPSGLRGLPGFSGEKG
KVGNPGCRGRVGPDGSKGEKGDAGDYGCSGHRGPDGYKGDPGGTGSDGDSFDGVPGTPGN
RGPEGLKGCFGDGVVGAPGPMGPSGLQGCHGPKGVPGPPGPIGLQGTSGIPGLLGRKGEK
GANGMSGPPGCPGRKPDQCDRGEPGLPGCSGPPGFTGQRGPPGEKGSLGEQGFPGIGAKG
APGKPGTPGNQGTPGLQGHPGPRGENGITGCNGLKGLPGFPGQVGCFGSSGRTGPPGAPG
LKGTRGLNGHPGFPGENGCKGQKGCIGPRGPPGDTITIPLKGQKGAPGHYGEPGFAGARG
NKGAPGPPGQPGYPGLNGPPGFESGCRGPPGTPGQPGEPGTCGRPGPNGIRGFPGDSGDP
GDPGLTGSSGTPGFPGFDGPKGDKGDSISVPGRKGARGPSGESGLSALPGDKGDPGDPGP
QGPCGPFGPSGPPGSTGLSGPPGVIGPPGPCGKHGPEGPPGPPGQPGHKGNIGRTGFRGP
PGPPGLHGLDGLKGVKGEIGSRGLGLKGDEGAQGLTGEKGIQGDPGLQGTSQTGVQGPKG
QQGAPGDPGLIGPPGLCGADCKNGKLGQCGEQGYPGTDGPPGPKGEVGEPGIVFTVPGDE
GEKGCPGLPGYKGEKGYPGLNGQHGYQGPEGQKGEKGQHGPMGLPGPFGPMGECGPQGPC
GAKGETGDPGQKGDPGIAKPPKIPCSPPQGPTGPRGPPGLTGIEGVAGPSGRVGPKGMKG
PIGAVGFSGLSGPPGLDGPPGNPGEDGLRGPPGFQGSQGTPGERGPPGNNERFTSGFLLV
MHSQSEEVPACPQGLTQLWEGYSLLYLEGQERAHTQDLGQAGSCLRMFSTMPFSCCNMEN
CNYASRNDKSYWLSTTASIPTMPLVGPEIQPHISRCVVCEAPSPAIAIHSQDTSTPQCPH
TWRSLWTGYSFLMHTGAGDEGGGQSLTSTGSCLQDFRSQPFVECQGPRGTCHYFATIYSF
WLTRVSGHHFNQSPHSTVLNSEQEQRSSVSQCNVCMRE
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atgtctaattcagtgcgtaagttgaaggtatgggcacagggacctcctggtccattaggt
cggcagggcccccaggggccccaaggtatacctggcaccccaggacttcctggcgagaag
ggtcaacgaggagccataggataccctggggtgtctggccagaaaggagatcagggcgtc
aaaggatctagaggccatgcaggattagatggagtgccaggtcatccggggccgggtggt
gctcctggatttccagggaaggacggttgtaatggaaccagaggagatcgtgggctggat
ggtgagctagggctacccggcctcccaggacctgtgggactacctgggataaaaggagcc
aaaggagacccatctaatagaattgttttcatccttggaaaacctggtgtcgatggactt
ccaggaatttgtggcccacgaggacctaatggggtctttggcccttgcggtccaccagga
caagtgggacctgtaggatttatgggcctaccaggatcagctggtccaagaggcccaccg
ggagatccaggaagatcattgcctggaccgaaaggagaagagggggagcagggtcctcag
ggggaaccaggaccttttgaatatgtggagcccaaaccagaagactacgtcaaaggatat
aagggtcctgatgggtgtcaagcagaaaaaggagagaaaggaattattggtttccctgga
cctagagggggacttggggaaaatggtctccctggtctttttggcaacacaggaccaaag
ggctacacaggagaccccggacctataggaaagcgggagtactattaccaaaatgtgaca
ggactgcctggagatccagggctccttggtgcaactggaccacctggttacagaggaatg
atgggtattcctggaccccctggtgatcaaggaccatcaataataggtgctatgggtgaa
tctggtctccagggtttacctggactcagaggagaaaaaggcaacccaggaagaatacag
actaagtttctgaattttccaggggaacctgggaaacggggccttccagggcctaaagga
aaacgaggaaatcctggctctcctggttactactgccttcctggtgagcgtggggatcca
ggaaatgttggacaaagggggcgtcctggaatactaggtgtccagggtaggaaaggtcct
gatggggcgtgtgcatgtgaaccccctggtgacctacctggcaggcctggcattccagga
tttccgggtgacccaggtgatcctgggcgaaaggggtcccctggtcccattggtgatgtc
ggtcctttaggaaagagaggtgcaggcggtgcaactggccccagaggcttcacaggagtc
agaggaattaaaggagagaaaggagatttcacggttttaaggatgaaggggcagaaggga
ggtaggggaactgttggaccaatcgggccaccaggatacagtggcaggagaggggctgat
gggaagatgggcatacctggagatcctggacctctgggatataatgttgttggtctgcca
ggtgataggggttgtcaaggaagtgttggtgcaaagggcttcagaggtccagtggggcct
cctggcccatatatgatgggggctgttgggcgacgggggcaacaaggagacccgggggcc
caaggccaaacaggaccccctggccccaaagggtgccgaggtgaaactctgccctgtggg
actggcattcttgggccatctggattaagaggactgcctggtttttcaggtgagaaaggg
aaggttggaaatccaggatgcagagggcgagttggaccagatggttccaagggagagaaa
ggcgacgctggtgattatggatgtagcggacacagaggtccagatggatacaaaggagat
ccaggtggcactggttctgacggcgacagttttgatggtgtacctggcacacctggtaac
cgtggaccagagggtctgaaagggtgttttggagatggggttgtcggggctccaggaccg
atggggccctctgggcttcagggatgccacggccctaaaggtgtccctggaccccctgga
ccaattggattacaaggtacatctggtattcctggacttcttggtagaaaaggggaaaag
ggtgcaaatggtatgtcaggaccacctggttgcccaggaaggaaaccagatcagtgtgat
agaggagagcctggtctacctggctgctcaggaccacctggcttcactggacagcgaggc
ccccctggagagaaagggtcacttggggaacaaggatttccaggcataggagccaaagga
gcacctggtaagcctggtacccctggcaatcaaggaactccaggccttcaggggcatcca
ggacccagaggggagaatggaatcactggatgtaatggactgaagggtttgcctggattt
cctggacaagttggttgttttggcagctcagggcggactggccccccaggggctcctggt
ctgaaaggcacacggggtctcaatgggcatccaggtttcccaggggaaaatggatgcaag
ggccagaaaggatgcattgggcctcgaggacctccaggagacacaattacaatcccattg
aaaggccagaagggggcacctggacattatggagaacctggttttgctggagcaaggggt
aataagggtgcaccaggacctcctggccagccaggttatccaggactgaatggacctcca
gggtttgaaagtggctgtcgtggacccccaggtacccctggacagccaggtgagcctgga
acatgtgggcggcctgggccaaatggcattaggggattccctggggacagtggtgatcca
ggtgaccctggattgactggtagttctggaacccctggtttccctggatttgatggtcct
aaaggtgataaaggtgactctatcagtgtgccaggcagaaaaggtgcgagagggccgtct
ggagaaagtggcttgtcagctctgcctggtgataagggagacccgggtgaccccggccct
caagggccatgtgggccctttggtccatctggtccacctgggagcactggcctaagtgga
cccccaggagtcattgggcccccaggtccatgtggaaagcatggtccagagggccctcca
ggcccccctggtcaaccaggccataaaggaaacataggaaggactggatttagagggcct
ccgggacccccagggctccatggactggatggcctaaagggcgtcaagggtgaaataggg
tcacgaggtctgggtttaaaaggtgatgaaggagctcaaggactgacaggagagaagggc
attcaaggagacccagggttgcaagggacatcacaaacaggtgtccaaggtccaaaagga
cagcagggtgcaccaggagaccctggtttaatcggtcctccaggactttgtggtgcagac
tgtaagaatggtaaacttgggcagtgtggagaacagggttaccctggaacagatggacca
ccaggcccaaaaggagaggtgggagaaccaggtattgtattcacagttcctggtgatgaa
ggtgaaaaaggttgtcctgggttaccaggatataaaggagaaaaggggtaccctggactc
aatggccaacatggatatcagggcccagaaggccaaaaaggtgaaaaaggacaacatgga
cccatgggccttccaggaccctttggccccatgggtgaatgtggcccccagggaccctgc
ggtgctaaaggagagacaggagatccaggtcagaagggtgaccctggcattgccaaacct
cctaagattccctgtagccctccacagggacccactggtcctcgtggtcctcctggcttg
actggtattgagggtgtggctggacccagcggcagagtgggtccaaaaggtatgaaagga
ccaataggagctgtgggattctctggactatccggtccaccaggattagatggacctcct
ggaaaccctggagaagatggcctgagaggaccaccgggctttcagggatcccaaggaact
cctggtgaacggggtcctcctggaaataatgagaggtttacttcgggattccttttggta
atgcatagccagtctgaagaagtgcctgcttgtccccagggcctgacccagctttgggag
ggctacagcctgctttatctagagggtcaagagagagcacacacacaagacctgggtcag
gcaggttcatgtttgcgtatgttcagcaccatgcccttctcctgctgtaatatggaaaac
tgcaactacgctagccgcaatgacaaatcttattggctgtctaccaccgcttcgattcct
acgatgcctctggtggggccagaaattcagccacacatcagcaggtgtgtggtgtgtgag
gctccatcaccagccattgcaatacacagtcaagacacatctacaccacagtgtccacac
acatggagaagtctttggactggatattcattcctgatgcacacaggagcaggggacgag
ggaggcggacagtctctgacgtcaacaggaagctgcttgcaggactttcgcagtcagcca
tttgtggagtgtcaagggccgcgtggcacgtgccattattttgccaccatctacagcttc
tggctgactagagtgagcggacatcactttaaccagagccctcacagtactgtactaaac
agcgaacaggagcagcgcagcagcgtcagccaatgcaatgtctgcatgagggagtga
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integrated database retrieval system