Myxocyprinus asiaticus (Chinese sucker): 127422174
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Entry
127422174 CDS
T08782
Name
(RefSeq) collagen alpha-5(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04510
Focal adhesion
masi04512
ECM-receptor interaction
masi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127422174
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127422174
09142 Cell motility
04820 Cytoskeleton in muscle cells
127422174
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
masi04147
]
127422174
00536 Glycosaminoglycan binding proteins [BR:
masi00536
]
127422174
Exosome [BR:
masi04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
127422174
Glycosaminoglycan binding proteins [BR:
masi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
127422174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
127422174
NCBI-ProteinID:
XP_051521471
LinkDB
All DBs
Position
31:35834578..35866362
Genome browser
AA seq
1451 aa
AA seq
DB search
MSHESWYLKKPICIVLALLQGVKGPCGVPGQKGIKLFVTGPKEPKGDQGDTGDIGCLGPI
GRPGCPGPKGEKGERGEPGGPGKDGNDGYQGEFGPKGEPGDVGFQGATGVAGETGPKGDR
GPPGIPGELIVVNLETKGQKGFPGPPGLPGLRGSEGFSGFPGNLGPPGLAIPGPKGKPGH
PGFRGEKGEKGEPALCITGPKGIDGPPGERGPPGDRGSPGTTDVQKREGPQGPKGEKGLT
GPEGLRGDPGKPGEQGALCRLCAVSSCEPGPPGPPGDPGKHGEPGVEGFQGIKGSKGFQG
PEGPPGPPGSLGPPGLPGPLGPKGDRRTRAEIGEKGQIGHSGFPGPSGINGKDGIPGIPG
FKGPPGPKGNPSPPGPKGNCGDQGPSGEPGSTGPMGSQGSMCVGQPGIPGEKGSLGVLGR
PGNPGEPGEKGSPGSVQMTPGDIGEPGRPGPPGLPGPPGNEGGPGVQGCPGLCGLKGEKG
LSVQGGPGLIGPKGDKGVKGRPGQPGFGCAGRPGPPGPPGFPGSKGDIAFGCPGPKGRQG
LPGDEGALGSPGNCGPPGLPGCPGQRGRDGQPGDCGVRGLDGSPGDAGVPGCCIPGAKGD
EGPLGNMGLDGPTGVQGLKGSRGETGPSGQGVPGPTGMVGIPGRNGMAGLIGIQGPKGFR
GRDGSPGFPGPRGNQGDTGSMGPPGVEGNHGPPGAPGPKGLMGRNGVPGDKGKPGEPGDH
GASGPKGQPTNLMSPGDPGECGQPGFIGLTGFKGNLGIPGNYGECGKNGLPGSTGPPGPP
GDHGQKGLPGNKGLDGNFGDPGVMGFPGVKGEKGLPGVCGEPGTPGVTGQNGPKGIKGEP
SQPGPGLPGPPGEKGQPGCPGSKGEKGDKGIFGMAGPPGLAGFPGVRGETGVPGDPGPPG
PPGDNGFDGLPGPTGNQGPCGPPGVPGLVGGPGSPGPRGEQGKDGIPGPSGAKGDRGLTA
SGTPGPPGIKGEKGTKGNSGPQGPCGLLGPCGPVGEKGPPGRPGEPGPRGCPGPAGFCVD
GPKGERGPCGSPGQRGLQGPRGPPGDPGPGLKGDKGETGPLGLGGMPGCTGDSGVPGAPG
SDGGPGCKGPKGDMGPMGEVGPIGIKGNCGLSGPPGLKGCKGSRGPKGPKGCDVEVEVIP
IPGDPGSCGKAGEKGEQGHPGPPGHTGPQGTQGRKGTTGLDGGPGRPGIPGPKGDSGPPG
LQGARGLSGEVGPKGSVGPKGTFMQNGTRDSFLFTRHSQRRDIPTCPNGSRHMYFGYSLL
FINGNNRGHGQDLGTIGSCLQRFSTMPFLVCNPDESCRYASRNDYSYWLSTDTPMSSNKD
LISGDLLEQYISRCAVCEAPANVIAVHSQTNQIPRCPAGWLSLWQGYSFVMETAAGAEGS
GQPLVSPGSCLEEFRKIPFIECHGRGTCNFYSDSYSYWLASLDPVRMFSMPVRQTARQQD
IVSRCRVCMKQ
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatgaatcatggtatctcaaaaagcctatatgcattgtcttggctttgctgcag
ggtgtaaagggtccatgtggtgtaccaggacaaaaaggcataaagttatttgtaacagga
ccaaaagagccaaagggtgaccaaggtgatactggagacattggatgccttggaccaatt
ggtcgtcctggttgtccaggtcccaagggggagaaaggggaaagaggggagcctggtggt
ccggggaaggatggaaacgatgggtatcaaggagagtttggccctaagggtgagcctgga
gatgttggatttcaaggggcaacaggtgtagctggggaaacgggtccgaagggcgatcgc
ggcccccctggtatccctggagagttaattgtagtaaatttggagaccaaaggtcaaaaa
ggttttcctggaccaccgggactccctggtctccgaggtagtgaaggtttcagtggcttt
cctggaaatctaggtcctccaggccttgccataccaggacctaagggaaagccaggtcac
ccagggtttaggggtgagaaaggtgaaaaaggagaacctgcactttgcatcaccggaccc
aaaggaattgatgggccaccaggggaacgaggaccccctggtgaccgtggctctccagga
actacagatgtccaaaagcgtgagggaccacaagggcccaagggtgagaaagggctaaca
ggacctgagggtctgcgtggagaccctgggaaaccaggagagcaaggtgctctttgcagg
ctgtgcgctgtctctagttgcgaacctggacccccgggaccacctggagatcctggtaaa
catggagagccaggtgttgagggatttcaaggcattaaaggatccaaaggtttccaaggg
ccagagggtccacctggtcctccaggttcattaggtccaccaggtttacctgggcctctg
ggacccaaaggagacagaaggacaagagctgagattggggagaagggccagataggacat
tctggttttccaggaccatctgggataaatggaaaagatggcataccaggcatccctggc
ttcaaaggaccaccaggaccaaaaggaaacccaagtcctccaggacctaagggaaactgt
ggtgaccaaggacctagcggggagcctggcagcacaggtccaatgggcagccaggggtca
atgtgtgtgggccaaccagggatacccggagagaaaggcagtttgggagttttgggtcga
ccaggaaatcctggagaaccaggtgagaaaggatctccaggatcagtacaaatgacacct
ggagacattggggaacctggacggcctggtccacctggtctaccaggacctccaggtaat
gagggcggccctggagttcaaggatgtcctggactgtgtgggttaaaaggagagaaagga
ctgtcagtccaaggaggacctggacttattggtcctaaaggtgataagggtgttaaaggg
aggccgggtcaacctggttttggatgtgcaggccgccctggccctccaggaccacctgga
tttccaggatcaaagggggacatagcattcggctgcccagggcccaagggtcggcagggg
ctgccaggagatgaaggggctcttgggtcacctggaaactgtggccctcctggattacct
ggatgtccaggtcaaagaggaagggatgggcaaccaggagactgtggtgtgcggggtctt
gatggttcacctggagatgctggggttccaggatgctgtattccaggagccaaaggtgat
gaagggcccttaggaaacatgggactagatggacccacaggggtgcaagggctgaagggg
tcacggggtgaaactggaccatctggacagggtgtacctggtccaacaggtatggttgga
atacctgggagaaatggaatggctggattgattggtatccagggaccaaaaggtttcaga
ggtcgagatggctcaccaggcttcccaggtccacgtggaaatcagggggatactggaagc
atgggtccacctggagtagagggaaatcatggaccacctggagcccctggacctaaaggt
ttaatgggtaggaatggagttccaggtgataaaggaaaaccaggggaaccaggagaccat
ggagccagtggtcctaagggacaaccaacaaacctcatgtctccaggagatcctggtgaa
tgtggccaaccaggttttattggtctaacaggctttaaagggaacctgggaatcccaggc
aattatggagaatgtggaaagaatggactcccaggcagtactggtccaccaggtcctcct
ggtgaccacggccagaaggggcttcctggaaataaaggtcttgatggaaattttggggat
ccaggggtaatggggttcccaggagtgaaaggcgaaaaaggtttgcctggagtttgtggg
gagcctgggactcctggtgtcacaggacaaaatggaccaaagggcatcaaaggtgaaccc
agtcagcctgggccagggcttccaggaccacctggcgagaagggtcaaccaggttgtcca
gggagtaaaggggaaaagggtgacaagggtatatttgggatggctgggcccccaggtttg
gcagggtttcctggggtaagaggcgaaactggagtaccaggagatccaggacccccagga
cctcctggtgataatggtttcgatgggcttccaggtccaactggaaatcaagggccctgt
ggtccaccgggtgttcctggtttggttggaggtcctggatctccaggacccagaggagag
caaggcaaagatggtattccagggccatctggagcaaaaggagatagagggctcactgcg
agtgggactcctggcccaccgggtattaagggtgagaaaggtactaaaggcaattctgga
ccacaagggccatgtgggctactaggaccctgtgggccagtgggagaaaagggccctcca
ggccgacccggagaaccggggcctcgtgggtgtccaggtccagcgggcttctgtgttgat
ggtccaaaaggggagagaggaccttgtggatcacctggccaacgaggtctccagggacca
cgtgggcctcctggtgacccaggtcctgggttgaagggagataaaggtgagactgggcca
ctggggcttggaggaatgcctggttgcaccggtgacagtggagttccaggagcaccaggt
agcgatggaggtcctggctgtaagggcccaaaaggagatatggggcctatgggtgaggtc
ggaccaatcggtataaaaggaaattgtggtctgagcggaccccctggattaaaaggatgt
aaaggatcacgtggacctaaagggccgaaaggttgcgatgttgaggttgaggtcatcccg
atcccaggagaccctggttcatgtggaaaagctggtgagaaaggagagcaaggacatcct
ggtcctccaggacatacaggtccacaaggaactcaaggtcgaaagggaaccacaggtcta
gatgggggtccgggaaggcctggaatccctggaccaaagggagacagcggcccaccaggg
ctacaaggtgctcgtggtttgtcaggtgaagtgggtcccaaaggctctgtaggtccaaag
gggacatttatgcaaaatggcaccagagacagcttcctttttaccaggcatagtcaaaga
agagacatcccaacatgccctaatggatcaagacatatgtactttggatattcactcctc
tttatcaatggcaataaccgtggacatgggcaggacctaggaactataggaagctgtttg
cagaggttctctaccatgcctttcctggtctgtaaccctgatgaatcctgtcgctacgct
tctcgaaacgattactcctattggctgtctacagacacaccaatgtccagcaacaaggat
ttgatcagtggtgatttgttggaacagtatatcagcagatgtgcagtatgtgaggcacct
gctaatgtgatagcagttcacagtcagacaaatcagatcccacggtgtcctgctggatgg
ctgtctttgtggcaaggttactcctttgtgatggaaacagccgcaggtgcagagggttca
gggcagccgctggtctctcccgggtcctgtctggaggagttccgcaagattccattcata
gagtgtcatgggcgtggcacctgtaacttctattctgattcttacagctactggctggca
tctcttgaccctgtgagaatgttcagtatgccagtccgtcagacagcaagacaacaagac
atcgtcagccgctgtcgggtctgtatgaagcagtag
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