Myxocyprinus asiaticus (Chinese sucker): 127422473
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Entry
127422473 CDS
T08782
Name
(RefSeq) roundabout homolog 1-like isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
127422473
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
masi04515
]
127422473
Cell adhesion molecules [BR:
masi04515
]
Immunoglobulin superfamily
ROBO family
127422473
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Ig_VEGFR-1-like_5th
Pur_ac_phosph_N
Unc5_NetrinR_N
FN3_DSCAM-DSCAML_C
Ig_PDGFR_d4
DUF7908
Motif
Other DBs
NCBI-GeneID:
127422473
NCBI-ProteinID:
XP_051521965
LinkDB
All DBs
Position
31:37236577..37612001
Genome browser
AA seq
1683 aa
AA seq
DB search
MQITWSGATPLVLFTLLQFVQSELLEGPLVVDAGTQEGTSNRATEAPTAEHDDDNTLGYT
GSRLRQEDSAPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTVEWYKDGERVETDRDNPRS
HRMLLPSGSLFFLRIVHGRRSKPDEGSYVCVARNYLGEAVSHNASLEVAILRDDFRQNPV
DVMVAAGEPAVMECQPPRGHPEPTISWKKDGVTIDDRDERITIRSGKLMITNTRKTDAGK
YVCVGTNMMGERESEIAELTVLERPSFLRKPSSQSVLVDQSAEFRCEAQGDPVPTIRWRK
EDGEMPKGRHEIWEDHTLKLKRLTSGDAGTYTCQAENMMGKTEASATLTIHVPPVFVVRP
RNQVAGMGRTVTFQCEATGSPQPAIFWQKEGSQNLLFSSQPPPPSSRFSVSQTGDLTITA
VERSDGGYYSCQALNIAGSVITKALLEVTDVISDRPPPVVRQGPTNQTVAVDGTVVLGCQ
AAGTPTPTILWRKDGVLVSTHDSRLKQLDTGALQIRYAKLGDTGMYTCTASTPSGEASWK
AYLEVQEFGAPVQPGRPTDPNLIPSAPSKPDVTDVSRTSVSLSWKPNLNAGATPTSYVIE
AFSHAVGSSWQTLADHVKAESFVLKGLKPSAVYLFLVRAANAYGLSDPSPISDAVKTQDI
PPTSQGVDHGQIQRELGDVVIHLHNPTILSSSSVRIQWTVEQQSQYIQGYKVMSRPSPEG
AQQRVEWAVFEVRTPGEHSAVVTQLRKGVTYEFKVRPFFNEFQGTDSDIKVGKTLEEAPS
AAPRGVTVTGSGDNGTAILVTWQPPPEEEQNGVVQEYKIWCVGNESRYHINRTVDGFTFS
VVIPGLVAGVPYKVEVAASTGAGPGVKSEATSFQLDSSGRMVSPLDVENTISQQISDVVR
QPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLSSSYAGIRKVPSFTFTPTVSYQRGGEA
VSSAGRPGLLNIGETATQPWLADTWPNSCSNHNDCTINCCTGSNGNSDSNLATYSRPADC
IANYSNQIDNKASNLLAPDTGLYSDVDLSNKINEMKTFNSPNLKDGRFVGPGGQPTPYAT
TQLIQSSLANNNVNSSSGGSGGGSADLNEKQSWKGSQGTPQKQSDITVPLQYNIMEQNKL
NKDHYRCEGPISGTIPYNQAQDTHTGGTYSSSDRGSSTSGSQGQKKGGRTSKQAKQNTMN
WTELLPPPPANPPMCQEYTLAMDNSYDTDLQCPLPPSRMYLQPNELEEEEEEVELERGPT
PPVRGVASSPAAVSYSHQSTATLTPSPQEEMHPMLQDPDGLHERRRLLVSPPPPPRPLSP
PHTYGYISSPLGLDTDGLEEEEDDEEGDETDAEVAQVHQHHTQPHQQLLAQQRALLRGLE
QTPASSTCDLESSVTGSMINGWGSASEEDNASSGRSSVVSSSDGSFFTDADFAQAVAAAA
EYAGLRVAKHSGKGQLPVSGAARKYQNLPPGHRPGSPVSTDSNVSAAPGQRRPLKRQKQH
PAAQTGYQRREVYTEDLPPPPIPPPAMLKSPTHPAKTIPEGPWGAMSPRSSSADGKDRRT
GSGGSRLREGTRTSSSERQEAQDLQRGQRTGKSSKQEAAAGAKSRQHPGSEDILPYSRPS
FPPVHSPRGERDPSSSSSLSSRGSGGQRRGEGLPGARRNPADIGLNTTGAFQTGGEELEM
VES
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcacatggtcaggagccacacccctcgtccttttcaccttgttgcagtttgtc
caatcagagctgttggaggggcctttggttgtagacgcggggactcaggaggggactagc
aatagggccacagaggccccgactgcggaacacgatgacgacaacactctgggctacaca
ggatcccgactgcgacaagaagactccgcaccccgcatcgtggaacacccctccgatctt
attgtatccaagggcgagcccgccaccctaaactgcaaggcggaagggcggcccaccccc
accgtggagtggtacaaggatggagaacgagtggaaacagaccgggacaaccctcgatcc
catcgcatgctcctgcccagtggctctctgttcttcctgcgtatcgtacatggccgtcgc
agcaaacctgatgaaggctcctacgtttgtgtggcccgtaactacctgggagaagcggtt
agccacaacgcctcactggaagtagctattctccgtgatgacttcagacagaaccctgtg
gatgtgatggtggcggcgggcgagccagcggtcatggagtgccagccgccccgcgggcac
ccagaacccaccatctcctggaagaaagatggagtcaccatagacgacagagacgaaagg
ataacgatacgaagtggaaaactgatgatcacaaataccaggaagacggatgcaggaaaa
tacgtttgcgtgggaaccaacatgatgggcgaacgagagagcgagatagcagagttgacc
gttctcgagaggcccagtttcttgcgaaagccaagcagtcagtctgtactcgtggatcag
agcgctgagtttaggtgtgaagctcaaggagaccccgtgcccaccattcgctggaggaaa
gaggatggagaaatgcctaagggacggcatgagatctgggaggatcatactcttaaactg
aagagactgacatcaggagacgctggtacttacacatgtcaggctgaaaacatgatgggg
aagacggaggccagcgccaccctcaccatccacgttcctccagtgtttgtggtcagaccc
aggaatcaggtggccgggatgggacgcaccgtgacttttcaatgtgaagcaacaggaagt
cctcagcctgccatcttttggcagaaagaaggcagtcagaacctgctgttttcctcccag
ccgccaccgccatccagtcgtttctccgtttctcagacaggtgatctgaccatcacggcg
gtggagcgttcggatggaggctattacagctgtcaggctctgaacatcgctggaagtgtt
atcacaaaagccctgctggaggttacagatgtgatttcagatagacctccgcccgttgtc
cgccagggtcctaccaaccagaccgtggccgtggatggaacagtagtcctgggatgccaa
gccgccggcactccgactcccaccatcctgtggagaaaagatggagtgctagtgtccacc
cacgactctcggctcaaacaactcgacacaggagctctgcagatccgttacgctaagctg
ggagacactggaatgtacacctgcaccgcatccacccccagtggagaggcatcatggaag
gcttacctggaggtgcaagagtttggtgcaccggtgcagcccggcagacccacagatcca
aacctgatccccagcgccccttcaaaaccagatgtcacggatgtcagtcgcacttctgtg
tctctgtcctggaagcccaacctgaacgctggggccacgcccacctcttatgtcatagag
gccttcagccatgcggtgggcagcagctggcagacacttgcagatcacgtgaaggcggag
agtttcgttctaaaggggctcaagcccagtgccgtctacctgttcctggtgagagcagct
aatgcatatggcttgagcgaccccagcccaatcagtgacgctgttaagacacaagacatc
ccaccaacgagtcagggtgtggaccatgggcagatccagagggaactgggagatgtcgtc
attcacctccacaatcccacaatcctctcttcgtcttccgtcagaatccagtggacagtg
gagcagcagtcgcagtacattcagggttataaggtgatgtcccggccatccccggagggc
gctcagcagcgtgtggaatgggccgtgtttgaggttcgaaccccaggggagcacagcgca
gtcgtcacgcagctcagaaagggcgtgacctatgagttcaaagtgcgacctttcttcaat
gagttccaaggcaccgacagtgatatcaaagtgggcaagacccttgaagaagcacccagc
gccgctcccaggggggtcactgtaacaggaagcggtgacaatggcacagctatcctggta
acctggcaaccgcccccagaggaggagcagaacggtgtggtacaggagtataagatctgg
tgtgttggaaatgaaagccgataccacattaaccgcacggtagacggttttacattctca
gttgtgatcccgggcctggtcgccggggtaccttacaaggtggaggtggccgctagcaca
ggggccggtcccggggtaaagagcgaggccacgtctttccagttggactcttcgggccgt
atggtttcgccgttggatgtggaaaacacgatttctcagcagatctcagatgtggttcgg
cagccggcgttcatcgcgggaattggcgcggcatgttggatcattctcatggtcttcagt
atctggctgtaccgtcaccgtaagaagaggaacggcctcagcagcagctacgctggtatc
cgcaaagttccctctttcaccttcacacccacagtgtcctatcagagaggaggagaggct
gtgagcagtgcgggaaggccgggtttgttgaatataggtgagacggccactcagccctgg
ctggcggacacctggccaaacagctgctccaatcacaacgactgcaccatcaactgctgc
actggcagcaacggcaacagcgacagcaacctagctacctatagccgcccagccgattgc
attgccaactacagcaatcagatagacaacaaggcgagcaacctcctggctccagacacg
ggtctctacagcgacgtggatctctcaaacaagatcaacgagatgaagacattcaacagc
cccaacctaaaggacggccgttttgtagggcccggtggtcaacctacgccctacgccacc
acacaactcatccagtccagcctggccaacaacaatgtgaacagcagcagtggaggaagt
ggaggaggaagtgctgacctcaatgagaaacaaagctggaagggcagccagggaacccct
cagaaacagtctgacatcactgtaccacttcagtacaacatcatggaacaaaacaaactg
aataaggaccactaccgatgtgagggccccatctcaggcaccattccctataaccaggcc
caggacacccacactggaggcacctacagcagctcggacaggggaagcagcacctctgga
agtcaagggcagaaaaaaggaggacgaacatctaaacaggccaaacagaacacaatgaat
tggaccgaactgctgccccctcctccagctaatccaccaatgtgtcaggaatacaccctc
gcaatggacaacagctatgacacagatctccagtgccctctgccaccctctcggatgtac
ctgcagcctaacgagctagaggaggaagaggaagaggtggagctggaacggggacccacg
ccacccgtgagaggagtggcctcctcccctgccgctgtgtcctatagtcaccagtctact
gcgacccttaccccatccccgcaggaggagatgcaccccatgctgcaggacccagacggt
ctacacgagcgcagacggctcttggtgagccctccacctccgccacgccctctttcccct
ccacacacatatggctacatctccagccccctcggcttggacacggatggcctggaggaa
gaggaggatgatgaagaaggtgacgagacagatgcggaggtggctcaggtccatcagcac
cacacccagccgcaccagcagctattagcccagcagagggctctcttgcgagggctcgag
cagaccccagcctccagcacctgtgatctggagagctccgtgaccgggtccatgattaac
ggctggggctcagcttcagaggaagataacgcttcatcgggacgatctagcgtcgttagc
tcatcggacggatcttttttcaccgatgctgatttcgcccaggccgtggcggctgcggcc
gagtatgctgggctacgagtggctaaacattctggaaaaggtcagctgccagtgtctgga
gcagcacggaaataccaaaacctccctccgggacaccgtccaggcagcccagtgtccaca
gacagtaacgttagcgcagctccgggtcagaggaggcccttaaagagacagaaacaacat
ccagctgctcagacaggctaccagcgcagagaggtctacacagaagatctgcctcctcct
cccattcctcccccagccatgcttaagtcacctacacacccagctaaaaccatcccagag
ggcccatggggagccatgtcccccagatccagttctgctgatggcaaggacaggcgaact
ggctcgggaggatccagactcagggagggcacccggacaagctcctcagaacggcaggag
gcccaggacttacaaaggggtcagagaacagggaaaagcagcaagcaagaggccgctgcc
ggtgcaaagagccgccagcacccaggctcagaggacatcctaccttatagtcgtccctct
ttcccacccgtccacagtcctcgtggggaaagagaccccagttcatcaagttcactgtcc
tctcgggggtccggtgggcagcgacgaggagaggggcttccaggggcccgcagaaaccct
gcagatattgggctgaacaccacaggagccttccagacaggaggggaggaacttgagatg
gtggagagctga
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integrated database retrieval system
