Myxocyprinus asiaticus (Chinese sucker): 127422586
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Entry
127422586 CDS
T08782
Name
(RefSeq) leucine-rich repeat and fibronectin type III domain-containing protein 1
KO
K16354
leucine-rich repeat and fibronectin type-III domain-containing protein 1
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
masi04515
]
127422586
04990 Domain-containing proteins not elsewhere classified [BR:
masi04990
]
127422586
Cell adhesion molecules [BR:
masi04515
]
Immunoglobulin superfamily
SALM family
127422586
Domain-containing proteins not elsewhere classified [BR:
masi04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
127422586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
Ig_3
LRR_4
I-set
LRR_5
fn3
Ig_2
ig
LRR_9
Ig_DSCAM-DSCAML_C
C2-set_3
Sp38
DUF4834
Motif
Other DBs
NCBI-GeneID:
127422586
NCBI-ProteinID:
XP_051522201
LinkDB
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Position
31:complement(42643140..42799540)
Genome browser
AA seq
754 aa
AA seq
DB search
MERLVFYVLVFGALVKAQHCPGRCICQTISPTLTLLCAKTGLLFVPPTIDRRTVELRLTD
NFITAIRRKDFLNMTSLVHLTLSRNTISQIDPHAFEGLKSLRALHMDGNRLTVINSDQLK
GLTSLRHLILGNNQIQHIEPSSFDLFVSTIEDLDLSYNNLRTLPWEAIAKMTNINTLTLD
HNLIDHIGVGTFTLLTKLVRLDMTSNRLQTLPPDTLFQNAQVLSDPKMSSSSKLTVSFGG
NPLHCNCELLWLRRLTREDDLETCASPEQLMDKYFWSIQEEEFICEPPLITKHQVTKPYV
MEGQGLTLKCKAMGDPEPKIHWRFPDGKLVHNNSRTILYDNGTLEILITTLKDSGAFNCV
ASNAAGIATAAVEVNMIPLPLFVNNTGHMREADPGLSDITTSTKSGNNDTKSQNKRVVVE
ELSANSAVIHWPSERHIPGIRMYQIQYNSTVDDTLVYRMIPSASKTFKINDLAAGREYEL
CVLAVYDDGITSLTATRVVGCVQFHTAVEAGQCRFIHSQFLGGTMIIIIGGIIVASVLVF
IIILMIRYKAYSGVGAAKAKARSGMHEHSQTNGSRLGRSSSKQQQHSQPNEERPCRSESP
TMKDCKALVLLQMEETQEELKVELPPLCEGKVPPSRRASLGGLPSDDTQTDSSLTGSTMS
LCLIGPSTGPTEPLRLKDSKGALTNISLLPSELARTRHRFSFDGDYALFQSHSYPRRART
RRHKSTTQLNTDTSPPCNRRVTFSSTEWMLESTV
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggagaggctggtgttttatgtcttggtgtttggcgctctggtgaaggctcaacactgt
cctggtcgatgcatctgtcagaccatctcaccaacgcttaccctcctctgtgccaagact
ggacttctgtttgtaccaccaaccattgaccgcaggaccgtagagctacgcctgaccgac
aacttcatcactgctatacgaaggaaagacttcttaaacatgactagtctggtgcacctc
acgctgtcacgcaataccatcagtcagatcgatccgcatgcttttgagggactcaagtct
ttgagagcgctacacatggacggaaaccgtctaactgtcattaatagtgaccagctgaag
ggtttgaccagcctgagacaccttatactgggcaataatcaaattcagcatattgaaccg
tcctcctttgatttgtttgtatccactattgaggacttggatttgtcctacaataacttg
aggacattaccttgggaagccatagccaagatgaccaacataaacacgttgactttggac
cacaatttaatcgaccacattggcgtagggaccttcacgctcctcacaaagctggtacga
ttggatatgacatcaaaccgcttgcagacattgcctcctgacactctattccaaaatgcc
caagtgttgtccgacccaaagatgtccagctcgtcaaagctgacagtgagttttggtggc
aaccctcttcactgtaactgtgagttactttggttacgtcggttgacgagggaagacgat
ctcgagacttgtgcttctccagaacaactgatggacaaatatttctggtccatccaggag
gaggagttcatctgtgagccgcctctcattaccaaacaccaggtcaccaaaccctacgtc
atggaaggtcaggggttgactctaaagtgtaaggcgatgggcgacccggagcccaaaatt
cactggcgttttccagatggcaagttggtgcacaataattctcgtacaatcctctatgac
aacggcactctggaaatcctcataaccactttgaaggacagcggcgccttcaactgtgtc
gcctctaatgcagctggaatcgcaacagctgccgtggaggtcaatatgattccattgccg
ttgtttgtgaacaacacaggtcacatgagggaggcagacccgggactctctgacatcacc
acctcgaccaaatctggcaacaacgacacgaagtcccagaacaagagagtggttgttgag
gaactgagcgccaactctgctgtgatccactggccatcggaacgccacattcctggaatc
agaatgtatcagattcaatacaacagcactgtagatgacaccctggtgtacagaatgatt
ccctctgcaagcaagacgttcaagataaacgatctggccgctggtcgcgagtacgagctg
tgtgtgttggccgtgtatgatgatggcatcacatctctcacagcgacacgagtggtgggg
tgcgttcagttccacacggcggtggaggctggtcagtgccgcttcatccacagtcagttc
cttggcggaaccatgatcatcatcatcggcggaataatcgttgcatccgtcctcgtcttc
atcatcatcctcatgatccgatacaaggcatacagtggggttggcgcagcgaaggctaaa
gctcgcagtggcatgcacgagcactctcagacaaacggaagcagactcgggcgttccagt
tcgaaacagcagcaacattcgcaaccgaacgaggaacgaccctgtcgcagcgagtcgccc
acgatgaaggactgcaaggctctggtgcttctacagatggaggaaacacaggaggagctg
aaggtggaactcccgccactttgcgaagggaaagtgccaccctctaggcgagccagtttg
ggcgggctgccctcagacgacacgcaaacggacagcagcctcacaggctccaccatgtct
ctgtgcctcatcgggccgagcaccggtccgacggaaccactgcgactcaaggacagtaag
ggggcgctgacaaacataagcctgctgcccagcgagctcgcccggactcggcaccggttc
tcattcgacggagattatgctctgttccagagtcacagttacccgcgacgggctcgaacc
cggcgacacaaatccaccacacagctgaacacggacacgtcacccccttgcaatcgcagg
gtgacgttcagcagcacagagtggatgttagagagtacggtgtga
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