Myxocyprinus asiaticus (Chinese sucker): 127423245
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Entry
127423245 CDS
T08782
Name
(RefSeq) cholesterol transporter ABCA5-like isoform X1
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127423245
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
masi02000
]
127423245
Transporters [BR:
masi02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
127423245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
AAA_23
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
127423245
NCBI-ProteinID:
XP_051523349
LinkDB
All DBs
Position
32:36879139..36924426
Genome browser
AA seq
1672 aa
AA seq
DB search
MYFIPVSDPCASQLKHARKMKQPVSRRDAGVWHQTKSLLYKNLLIKWRTKQQSLQELILP
LLLLSLLILISTLNPHVSYGSISTKELENDRELTLKGIGYTPINNVTNHIMEEVARELPV
NEVRLEMFSTEEDLENASLYKPDGYVGVVFLDHMSYRLRFPHSQLPLPSDFTESITSCDA
HYVNCRAANYWYSGFIRMQSLIDAAIIQMQTKRPMWNTLKVRAVMMGHPGSVEVQKFPHA
LISIYLVLAFTPFVSFLIVNVAAEKEQRLKDTMGMMGLYDSAFWLSWGLLYAALVTTMSI
LMAVIATCTPLFSNSNFFLIFLLIFLYGISSIFFSFMLTHLFKKPKFASTVGSMLTVVFG
CLSLFTVLMRDFPQFAVWLLCLLSPSAFSIGIAQVVYLEAQGDGAVFSSLGNGPHALYVP
MVMLFLDCILYLLLAIYLDQVLPGEFGTRRSVLYFLQPSYWSKQRKRYVEVSSVYEGEVN
GTPASDESVEAVSPEFRGKEVIRICNIHKIYKEKDGTVEALRGLTFDIYEGQITALLGHS
GAGKSTLMNILCGICPPTEGTATIYGSPVAEIAEGEEMKQLVGICPQFNIIFDVLTVEEH
LRIFAAIKGILPSDIDSEVKKVLKDLDLEKIMDAQAKNLSGGQKRKLSVAIAILGDPKIL
LLDEPTAGMDPVSRHQVWSLLKSRRAGRVTVLSTHYMDEADILADRKAIISRGQLKCVGS
SLYLKTKCGVGYHLRMSVAECCEVEHITSLVKQHVSKAQLSRQQEAVLTFTLPFESMDTF
PGLFAELDCRPDLGIINYGVSMTTLEDVFLRLEAEAEVDQADYSVFNQEKVEEGGEASSL
DDTDQRLLMFSDNRQDAVTGRALWWQQFRTVAWLHILNLQRERKPIIYNLMLFLVFLSSM
LILSVATGNIQIHSPERLFSPIYLLHRNEAPRKYTTSLLVQNSTDSDLSGFIQNLESQDI
EVEMMKKPDYMSAAPVSAAINVTGSSKDLSYVLAFNSTTVHSLPMALNVLSNALLKGLNG
TGRIKTWTKPFDYQIPDKTSYAMVYIEAVILGMLAAGMPAYFAMDHTRDRELKCRSTLRI
SGLIPSAYWCGQAAIDVPFYYLILTCMTSTLFAFHSTNLLTSSNIMSVALCLIGFSPAMI
LFTYCVSFMFVRVQSNRDFFSVVSMMLCVVSASLVQLSLVNESAGLYRILHIALCFFSPL
YPLMGCLNCITTATFLQSSHEEEFLWKSLFISVVAPYIQCILLLFILRWSEKRYGGQTMK
NDQLCRISSNAKSKVQRNPEENISEDEDVQVEKARVKEALTCQSCEEKPVVVVSDLRKQY
KGKREGFSLGKIRKVATKNISFCVRKGEVLGLLGPNGAGKSTIMHMLSGDTEPTAGQILM
GDYFQPMENPLEHVGYCPQVNPLWPRITLQEHLEIYAAIKGLHQCDIPNIIKRVVNALEL
KDHLYKQAKHLSAGLKRKLCFALSMLGNPQIVLLDEPSAGMDPKSKQRMWRAIRAAFKNK
QRGALLTTHYMEEAEAVCDRVAIMVSGQLRCIGSIQHLKGKFGRGYSLEINLREELTGLQ
QVALLHKEILKIFPHAARQDSFATLMVYKIPMEDVTSLAKSFAQLESAKKNFNFEEYNFS
QSTLEQVFMDFAKEQENEEEEVGSLSTTFQWQRLRQDGSVSVNHAESIVHQL
NT seq
5019 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcatacctgtgtctgatccatgtgccagtcagctgaagcatgctcgaaaaatg
aagcagcccgtaagtagaagagatgccggagtctggcatcagacgaagagcctgctctac
aaaaacctgcttatcaaatggaggaccaaacaacagagtctccaggagctgatcttaccg
ttgctcctcctgagtctcctcatcctcatcagcaccctcaaccctcacgtctcttatggc
agtatcagcactaaggagctggagaatgatagggaactgacactcaaaggtatcggttac
acccctatcaacaatgtcaccaatcacatcatggaagaggtggcacgggaactgcccgtg
aatgaggttcgattggagatgttctccactgaagaagacctggagaatgccagtctctac
aaacctgatggctacgtgggggtggtcttcctggatcacatgtcataccgtttgcgattc
ccacacagtcagctccctctgcccagtgacttcactgaatctataacaagctgtgacgca
cactatgtaaactgccgtgctgccaactactggtattctggattcatacggatgcagtcc
ctcattgatgctgccataatacagatgcagaccaagcgtccaatgtggaacacattaaaa
gtgcgtgcagtgatgatgggtcatccaggttctgttgaggtccagaagttccctcacgcc
ctcatctccatttacctggtgctagcattcacacccttcgtctccttcctcatagtcaat
gtggcagctgaaaaagagcagcgactcaaagacaccatgggcatgatgggattgtatgac
tctgcgttctggctttcatggggtctcctctatgccgcactagttacgaccatgtccatt
ctcatggctgttatagcaacctgcacccccctgttctccaacagcaacttctttctgatc
ttcctcctcatcttcctctatggaatatcttctatcttcttctccttcatgttgacccat
ctgtttaagaagcccaagtttgcaagtacagtgggctccatgctgacggtggtcttcgga
tgtctgtctctcttcactgtactaatgagagattttccccagtttgctgtctggctcctc
tgtcttttgtctccgagcgctttctctatcggcattgcccaggtggtgtatctggaagct
caaggagatggtgcagtgttctcctctcttggcaatggtcctcatgccctctatgttcct
atggtcatgctgttcctggactgcattctctatttgcttttagccatttacctggaccag
gtgctcccaggggagtttggcacaaggcgctctgtgctgtacttcctgcagccatcctat
tggtcaaagcagaggaagcgctacgtagaggtgagctccgtttatgagggggaggtgaat
ggaacgcctgcgtctgatgaatcagtggaggcggtttctcctgagttcagaggcaaagag
gtcatcaggatctgcaatatccataaaatctacaaagagaaagacggcacagtggaggct
ttgaggggtttgacctttgacatctatgagggtcagatcacagccctcctgggtcacagt
ggagctggaaaatccaccctcatgaacatcctgtgtggcatctgccctccaacagaagga
acagccactatttatggctcccctgtggcggagatagcagagggagaagagatgaaacag
ctggttggtatatgcccacagttcaacatcatctttgatgtgctcactgtagaggaacac
ctgaggatatttgctgcaatcaaagggatcctgccttctgatattgatagtgaggttaag
aaagttctgaaggatctggatttggaaaagattatggatgcccaggcaaagaacctgagt
ggaggccaaaagaggaagctctcggtggccatagcaattctaggagatccaaagatactt
cttctggacgagcctacagctggtatggacccagtgtcacgccaccaagtttggtcttta
ttgaagagccgtagagcaggcagagttactgtactcagcacgcattacatggacgaggca
gatatacttgcagaccgtaaagccatcatctctcgaggacagctgaaatgtgttggctcc
tctttgtacctgaagaccaagtgtggggttggctaccatcttaggatgtcagtggctgaa
tgctgtgaggtggagcacatcacatcgctggtcaagcagcatgtttccaaggcacagttg
tcaaggcagcaagaggctgtgctcacattcacgttgcctttcgagagcatggacactttc
ccagggctttttgcagagcttgactgtcggcctgacctgggtataattaattatggggtc
tccatgacaacattagaggatgtattcttgcgtctggaggcagaagcagaggtggatcag
gccgactacagtgtgtttaaccaggagaaggtggaagaaggtggcgaagcttcctctctg
gatgatacagaccagaggctgttgatgttctcagacaacaggcaggatgcagtaactgga
cgtgccctctggtggcagcagttcagaacggtggcctggctgcacatactcaacctgcag
agagaaaggaaacccatcatatacaatttgatgctgttcctggtttttttgtcttcaatg
ctgattttgtctgtggcaacaggaaacattcagattcactctcctgaaagactgttttca
cccatatacctgctgcaccgcaatgaagctccacgcaaatacaccacaagcctgcttgtg
caaaactccactgattctgatctgtcagggttcatccagaatctggagtctcaggacatt
gaagtggaaatgatgaagaagccagactacatgtctgcagcacctgtgagtgctgccatc
aatgtaacaggatccagtaaggatttgtcctacgtcttagcatttaacagtactactgtg
cactccctgcccatggctctcaatgtgctcagtaacgccctcctgaagggtttgaacggc
acaggacgcattaaaacatggaccaaaccttttgactatcaaatcccagataagacatcc
tacgctatggtttacattgaggcagtaattctggggatgctggctgctgggatgccagca
tactttgccatggaccacacgagagacagagaactgaagtgtcggtcgactctaaggatc
tctggtctgattccatctgcatactggtgtggtcaggcagccattgatgtccctttctat
tatcttatcttaacctgtatgaccagcaccctttttgctttccattctacaaacctgttg
acctcgagtaacatcatgtctgtggctctgtgtttgattggcttctctccagccatgatc
ctcttcacctactgtgtgtccttcatgtttgtcagagtccagagtaacagagacttcttc
tcagtggtatccatgatgttgtgcgtggtttctgcatctttagtccagttatctcttgtg
aatgaaagcgctgggctatatcgtatcctacacattgcactgtgtttcttcagtccactc
tatcctcttatgggttgccttaattgcattaccacggccaccttccttcagtccagtcat
gaggaggagttcctgtggaagagtctcttcatctctgttgtggctccgtatatccagtgt
atcctgctgctcttcattctgagatggtcggagaagagatatggagggcagaccatgaaa
aacgaccaactttgcaggatttcctccaatgcaaagagcaaagttcagcggaacccagag
gagaacattagcgaggatgaggatgttcaggtggagaaagctcgagtgaaggaggcgttg
acctgtcagtcctgtgaggaaaaaccagtggtggtggtgagtgacctgaggaaacaatac
aaaggcaagagagaaggtttctctcttggcaagataagaaaagtggccactaagaacatc
tccttctgtgttcgcaaaggtgaggttttgggtctgctgggaccaaatggagctggaaag
agcaccatcatgcacatgctgtcaggggacacggagcccactgctggacagatcctgatg
ggggattacttccagccaatggaaaaccccttggagcatgtggggtactgtcctcaggtg
aaccctctttggcctagaatcactttacaggagcacctggagatctatgctgccataaag
gggttacatcaatgtgatatcccaaatatcattaagcgtgttgtaaatgctctggaactg
aaggatcatctttataaacaggcaaaacacctgtctgcagggctaaagaggaagttgtgc
tttgcactaagcatgctgggaaatcctcagatagtattgttagatgagccgtctgcaggg
atggatcccaaatcgaagcagcgcatgtggagggcaatccgcgctgcatttaagaacaaa
cagcgaggagcccttttaaccacccactacatggaggaggctgaggctgtgtgcgaccgt
gtggccatcatggtctctggtcagctacggtgtattggttcaattcagcacctgaagggg
aagttcgggagaggctacagcctagagattaatctcagggaggagctcacgggtctccag
caggtggcgctgttgcacaaagagatactaaaaatatttccccacgctgctcgtcaggac
agttttgccaccctgatggtgtataaaatcccaatggaggatgtgacgtcactagccaag
tcgtttgcccagctagagagtgctaaaaaaaactttaactttgaagagtacaacttctcc
cagtcaactcttgaacaggttttcatggatttcgctaaagagcaggagaacgaagaggaa
gaggtgggatctctcagcactactttccaatggcagagactgagacaggacggttctgta
tccgtcaatcacgctgaaagcatagtacaccagctatga
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integrated database retrieval system
