Myxocyprinus asiaticus (Chinese sucker): 127423455
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Entry
127423455 CDS
T08782
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127423455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127423455
03012 Translation factors [BR:
masi03012
]
127423455
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
127423455
Translation factors [BR:
masi03012
]
Eukaryotic type
Release factors
127423455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
127423455
NCBI-ProteinID:
XP_051523726
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Position
32:complement(21137060..21146408)
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AA seq
564 aa
AA seq
DB search
MDSGDTAPDSWEQEDDVEATADTELQSAFTGLNVNAPEFVPSFLSRGPPENTTSDGSDVV
ASMEISEPVAAVENGETDASTVETWEQKGEPDVEEPRRGTLAEIGCCGDEAQDEMMEEDE
EMPTPKLPPPPPDAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLDKYEREAKE
KNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQ
ADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSLDRYE
ECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEPSELCPWYTGLPFIPHLDSLANYN
RSSDGPIRLPIVDKYKDMGTVVLGKLESGSIGKAQQLIMMPNRHTVEVLSLLSDDVETDF
AGPGENLKLRLKGIEEEEILPGFILCNAENLCHSGRTFDAQIVIIEHKSIICPGYSAVLH
IHTCIEEVQITALICLVDKKTGEKSKTRPRFVKQDQVCIARLRAAGTICLETFKDFPQMG
RFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggactcgggagacacagcccctgattcgtgggaacaggaggacgatgttgaggccacg
gcggataccgaacttcagtccgccttcaccgggcttaacgtgaatgctccagaattcgta
ccatcctttctttcacggggtccaccggaaaacaccacgtccgacggcagtgatgtagtg
gccagcatggaaatctcagaaccagtggctgcagtggagaatggagagacagatgccagc
acagtggaaacgtgggagcagaagggcgagccggatgtggaggaaccaaggcgtggaacc
ctggcagagattggatgctgtggggatgaggcacaggatgaaatgatggaggaagatgag
gagatgcccacccccaaactgcctcctcccccaccggatgcccctaaaaaagaacatgtt
aatgttgtgttcattggacatgtggatgcaggcaagtcaacaattggtggacagatcatg
tatctaactggtatggtggacaaacgaacgctggataaatatgaacgggaggcgaaagag
aagaacagagagacttggtatctttcctgggctttagacacaaaccaagaggaaagagac
aaggggaaaacagtagaagttggaagagcctactttgaaacagagaaaaagcactttact
attcttgacgctccaggccataaaagctttgtacccaacatgatcggaggggcatcccaa
gctgatttggcagtgctggtcatctctgctagaaagggcgagtttgagaccggttttgaa
aagggaggccagacaagggagcatgccatgctggccaaaacagctggagtcaaacatctg
atagtcctcatcaacaaaatggatgatcccactgtgaactggagcttggatagatatgag
gaatgtaaagagaagttagtgccatttctgaagaaggttggctttaatccaaagaaagat
attcacttcatgccctgctctggactgacaggagctaacttgaaagagccttccgagttg
tgcccctggtatacgggattacctttcattccacatctggacagccttgcaaactacaac
agatcaagtgatggtcctatcagattgcctattgtagacaaatacaaggacatgggcacc
gtggtgcttgggaagctggagtcgggaagtatcggcaaagcacaacaacttattatgatg
ccaaataggcatacagtggaggtgttgagtctgctctctgatgatgtagagacagatttt
gccggacctggtgaaaacctgaagctccggctcaaaggcattgaggaggaagagattctc
ccaggctttattctgtgcaatgctgagaacctctgccactcagggcgcacttttgatgcc
cagattgtcattattgaacacaaatctattatatgccctggttacagtgcagtactacac
atccatacctgcatagaagaagtgcagataacagccttaatctgtctggtggacaagaag
acaggagaaaagagcaagactcgcccgcgctttgtcaaacaagaccaagtatgcatcgcc
cgtcttagagctgcaggaactatctgcttagagacttttaaagacttccctcagatgggg
cggttcaccctgagagatgagggtaagacaatcgcaattggcaaggtgctgaagttggta
cctgagaaggactaa
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