Myxocyprinus asiaticus (Chinese sucker): 127424423
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Entry
127424423 CDS
T08782
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127424423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
masi03021
]
127424423
03036 Chromosome and associated proteins [BR:
masi03036
]
127424423
Transcription machinery [BR:
masi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127424423
Chromosome and associated proteins [BR:
masi03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
127424423
Chromatin remodeling factors
BAF complex
127424423
PBAF complex
127424423
GBAF(ncBAF) complex
127424423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
127424423
NCBI-ProteinID:
XP_051525588
LinkDB
All DBs
Position
3:38839175..38935347
Genome browser
AA seq
1571 aa
AA seq
DB search
MSIPNEPPVGMSHAGPSPGAGQSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVAHAMQG
QGPGDYPQDSMHPMHKPMEGMHEKGMGEEMHYGQMKGVGMRSLHSGMGPPQSPMDQHSQG
YMSPHPSPMGQVPEHVPSPMSGGGPTPPQMPQGQSGPMMPMDPQGMGQQVRGQSAFSPVQ
LQQLRAQILAYKILGRGQPLPENLQLAVQGKRSLPTMQQQPSNSGPYNRPPGMPMPHGGP
ATGPCSTPAMQTHTLSSGPKPWPEGQGAETPSASQKLPIPTPSGRPSPAPPLVPTAIQPV
PSTSLTPQPQPQPQSVPGQPSLIIQLQQKQNRITPIQKPQGLDPVELLQEREYRLQARIA
HRIQELENLPGSLPPDLRTKATVELKALRLLNFQRQLRLDVVACMRRDTTLETALNSKAY
KRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSISGKIQK
LSKAIATWHTNTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDE
YVANLTELVYEHKAAQAAKEKKRKRKKKKKEAVDDEAMVAIGPDGEPIDESSQMSELPVK
VIQTETGKVLQGTDAPKSSQLEAWLEMNPGYEVAPRSDSEESGSEFEEEDEDEVVSRAES
EEKKVIDPNSDEVSETAAKHIIESAKQDVDDEYSVQAGQTSSQSYYGVAHAVIEKVDKQS
TLLINGTLKQYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPY
LIIVPLSTLSNWVYELDKWSPSIVKIAYKGTPSMRRSLVPQLRSGKFNVLLTTYEYIIKD
KQILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLN
FLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVES
QLPEKVEYVIKCDMSAIQKVLYRHMQGKGILLTDGSEKDKKGKGGAKTLMNTIMQLKKIC
NHPYMFQHIEESFAEHLGYPNGIISGPDLYRASGKFELLDRILPKLKATNHRVLLFCQMT
SLMTILEDYFSYRNFLYLRLDGTTKSDDRALLLKKFNEEGSQYFIFLLSTRAGGLGLNLQ
AADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQ
KVIQAGMFDQKSSSHERRAFLQAILEHEEQNEEEDEVPDDETLNQMIARNEDEFELFMRM
DLDRRREDARNPKRKPRLMEEDELPSWILKDDAEVERLTCEEEEEKIFGRGSRHRRDVDY
SDALTEKQWLRAIEDGNLEEIEEEIRLKKRKRRRHVDKDSRREDVEKAKKRRGRPPAEKL
SPNPPKLTKQMNAIIDTVINYRDVSGRQLSEVFVQLPSRKELPEYYELIRKPVDFKKIKD
RVRSHKYRSVSDLEKDVMLLCHNAQTYNLEGSQIYEDSIVLQSVFKSARQKIAKEESEDD
SDDDDDDEEESEAESKSVRVKIKLSKWEERSQDKGKKRQSRGKAKPVVSDDDSEEEQEEN
EQSDGSHSDDE
NT seq
4716 nt
NT seq
+upstream
nt +downstream
nt
atgtccatccccaacgagccaccagttggaatgtcccatgctggtccttcaccaggcgca
ggccagtctccagggcccatcctagggcccagccctggacccggcccctctcctggctct
gtacacagcatgatgggccccagcccagggcctccaagtgtcgcacatgctatgcaggga
caaggacctggagattatcctcaggacagcatgcacccaatgcataagcccatggaggga
atgcacgagaaggggatgggtgaagaaatgcactatgggcagatgaaaggggtgggaatg
agatccctgcacagtggcatgggtcctccacagagcccgatggatcaacacagtcaaggt
tacatgtcccctcatccctcgccaatgggccaggttcctgagcatgtgcctagccccatg
tcaggaggagggccaaccccaccgcaaatgcctcagggtcagtcgggcccaatgatgcct
atggatccccaggggatgggacagcaggtcaggggtcagtctgccttcagcccagtccag
ctacagcaactcagggctcagatcctggcttacaagatcctgggtcgtggtcagcctctg
cctgaaaatttgcagttagctgtgcagggcaagaggagcctccccactatgcagcagcag
cccagcaacagcggcccctacaacagacctccaggtatgccaatgcctcatggagggcct
gcaactggaccctgttccactccagccatgcagacacatacacttagttctggtccaaaa
ccgtggcctgagggtcaaggggcagagacccccagcgcctcacagaagctgccaatacca
actcccagcggcagaccatctccagctcccccactggtccccactgccatccaacctgtc
cccagcacctccctcaccccacaacctcaacctcagccgcagtcagtaccgggccagccc
tcactcatcatacagctccagcagaaacagaaccgcatcacccctattcagaaacctcag
ggtctggaccctgtggaactcttacaagagagggagtaccggctccaggccaggattgct
cacagaattcaggagctggagaatcttccagggtcattgccacctgatctgcggacaaaa
gctaccgtggaactgaaggccttgagattgctcaacttccagcggcagctaaggctggat
gttgtagcctgcatgcgcagggatacgactctggagacagcgctgaactccaaggcctac
aagcgtagcaaaagacagacactgagagaagctcgcatgacagagaaactagagaagcaa
cagaagattgaacaggagaggaagcgcagacaaaaacaccaggagtatctcaacagcatc
ttgcagcatgcaaaggatttcaaggaatatcacaggtccatctctggtaaaatccagaag
ctgtccaaggccattgccacctggcacaccaacactgagagagagcagaagaaggagacg
gaacgaattgagaaagagagaatgaggagacttatggctgaggatgaagaaggttacagg
aagctaattgaccagaagaaggacaagcgtctggcttacctccttcaacagacagacgaa
tatgtggccaacctgacagaacttgtctatgagcacaaggccgctcaggctgccaaggag
aagaagaggaagagaaagaagaagaagaaggaagctgttgatgacgaagcaatggtagct
atcgggcccgatggagagcccatagatgagagcagccagatgagtgagctgcctgtcaaa
gtcattcagactgagactgggaaagtgctacaggggacagatgcccccaagtctagtcag
ttagaggcctggctcgagatgaaccctggctatgaagtcgctccacggtcagacagcgaa
gagagtggctcggaatttgaagaggaggatgaagacgaggtggtatcgagagctgaatca
gaagagaagaaagtcatcgatcccaacagtgatgaagtgtctgaaacagcagccaagcac
atcatagagtctgctaagcaggatgtggatgatgagtacagtgttcaggcaggccagacc
agctcccagtcttactatggagtagcccacgcggtcatagagaaagtggataaacagtcc
acccttcttattaatggaacactcaaacagtaccagatccaagggctggaatggatggtg
tctctatacaacaacaacctgaatggtattctcgctgatgagatgggtctggggaagacc
attcaaactatcgccctgattacatatctgatggaacacaagaggctcaatgggccgtac
ctcatcatcgtaccactctcgactttgtccaactgggtttatgagctggacaagtggtca
ccaagtattgtgaaaattgcctacaagggcacaccgtccatgcggaggtctttggtgccg
cagctccgtagtgggaagttcaatgttcttcttactacatatgagtacattatcaaagac
aagcagattctcgccaagattcgctggaaatatatgattgtggatgaaggccaccgcatg
aagaatcatcactgcaaactcacgcaggtgttgaacactcactatgttgctcccaggagg
ctgttgctcacgggaaccccactgcaaaataagctacctgagctctgggccctgcttaac
ttcctcttgcccaccatcttcaaaagctgcagcacctttgagcagtggttcaatgctccc
tttgcaatgacaggagagagggtggatctaaatgaagaggagaccatccttatcattcgt
cgtttgcacaaggtattgcgtcccttcctgctacgcagactgaagaaagaggtggagtct
cagttgccagagaaggtggagtatgtcatcaaatgtgacatgtcagcaattcagaaggtg
ctatataggcacatgcagggcaaaggcatcctgctcactgacggctcagagaaagacaag
aagggtaaaggaggagccaagaccttaatgaacaccatcatgcagctgaagaagatctgt
aatcatccctacatgtttcagcacatcgaggaatcctttgctgagcacttggggtatcca
aatggcattatcagtggccctgacctgtaccgtgcctctggcaagtttgagttactggac
cggatcctgcctaagctaaaggcaaccaatcacagagtgctgctcttctgtcagatgacc
tccctcatgactatcttggaggattatttttcctaccgtaacttcctctacctgcgtctg
gatggaaccacaaagtctgatgaccgggcattgcttttaaagaaattcaatgaagaaggc
tcacaatatttcatcttcctgctgagcaccagggcaggaggtcttggcctcaacttgcaa
gctgcagacaccgttgtgatctttgacagcgactggaacccccaccaggatttgcaggcc
caggaccgagcccaccgtatcggccagcagaacgaagtacgcgtactgcggctttgtacc
gtgaacagcgtggaggagaagattcttgcagcggccaagtataaactgaatgtggatcag
aaggtcattcaggctggcatgtttgatcagaagtcctctagccatgagcgcagagccttc
ctgcaagctattttggagcacgaggaacaaaatgaggaggaagatgaagttccagatgat
gaaactcttaatcaaatgattgcccgtaatgaggatgaatttgagctcttcatgcgcatg
gatttagaccgtcgtcgagaggatgcacgcaacccaaaacgcaaacctcggctaatggag
gaggatgagctgccatcatggatcctgaaagatgatgcagaggtggagcgactcacctgt
gaggaagaggaagaaaaaatcttcggccgaggatcacgtcaccgcagagatgttgactat
agtgatgcgttgacagagaagcagtggctgagggccatagaagatggcaacctggaggaa
attgaggaggagatacgcctgaagaagcgcaagcgtaggagacacgtggacaaagacagc
aggcgtgaggatgtagagaaagccaagaaaaggagaggacgccctcctgcagagaagctc
tccccaaacccacccaaactcacaaaacagatgaatgccatcatcgatactgttatcaat
tacagagacgtatcaggccgtcagctcagtgaggtctttgtacagctgccctccaggaaa
gagctccctgaatactatgaactgataaggaagccagtggacttcaagaagatcaaggat
cgtgtgcgtagccacaagtacagaagtgtgagcgatctggagaaagacgtcatgcttcta
tgtcacaatgctcaaacttacaatctggagggctctcagatctacgaggactccattgtt
ctccagtcagtattcaagagtgccagacaaaagattgctaaggaagaaagcgaagatgac
agcgacgatgatgacgatgacgaggaagaatcagaggcagagtctaagtcagtgagggtg
aaaattaagctgagcaaatgggaggagagaagtcaggacaaaggcaagaagagacagagc
cgtggaaaggctaagcccgtggtcagcgatgatgacagcgaggaagaacaggaggagaac
gagcagtcagatgggagccacagtgacgatgagtga
DBGET
integrated database retrieval system
