Myxocyprinus asiaticus (Chinese sucker): 127424706
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Entry
127424706 CDS
T08782
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
127424706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
masi03009
]
127424706
Ribosome biogenesis [BR:
masi03009
]
Eukaryotic type
Pre-60S particles
RNases
127424706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
127424706
NCBI-ProteinID:
XP_051526067
LinkDB
All DBs
Position
33:complement(29997491..30018153)
Genome browser
AA seq
1239 aa
AA seq
DB search
MLRSTGFFRGIDCPFYCDKGKAGPYGCSRPYCHFRHSKQRRASSGINDIRKTKALSASSN
DQGYDPFSPEVERPGENCNEEPPSSLSEGQDVDLGTMELELVNRAIETVRSEMERDKKKL
SQIGDQEYEPASSSVKRHRPTAASSHQGYDPGSYQMGQATEYNPTPRSSKYTLDSENSSS
NALEYVPTAVSKTSIKKVLPPPLSRVMPPPTVNTRSVKCKYTLDNSKPSTDMEYDPLLNY
SAKLTVKEQRALCSREEGRKRFHPTEREKQSEDEEYVLTVKKLRPLPPKADVPKYTASFS
ESDEESSGTEYRPMSISRLQLKGIHAGLKRERESGDGNSGTLRQQKKQDSKTEDVFSLSE
SEDFEFQAVDRTCKIMVEKKMTESSQSKSNKYEKEVKDLNKKSNSHKEKQGSSSRDKMSK
NSSKGSMKKDKTQGRIVEGSSKPKEKSSEKVRKESTEAKHSVDKNKQSGKLKSDHSNKEK
DKGSCDSNKPRTFKPVKTDKESSKSKDNKNGKLETSGKEQKSSNSSRSNKEKSKKNSSAS
NQKEARETKQRSLKHVDLFGAESAEEEDERIVRKSASAFKWGSLVNKRKTSVTSSSEDDY
ENDDDCGGDDDVGVDYSSLQAEMENDLDPMEECLRIFNESKEVKMEDKGRQAKQPSQEQE
EEEDNTESTLSTLFPGQKKRVSHFKAQGKSETSLNAVPIPHRRLTAQEICYQRMQKAQQQ
AAQLAAAVKTVSASTKPVLGLSGAKQRVAHQPNASLPSPKPGLTNSSRRVLSPTTTVTDQ
VSVKAHTSAGIPSKTTTTSLQKRVAHAPTLKSSTMKCPIIPAEFGAKVPTNVRQRYLNIF
IDECLKFYPSEQKAFQTALEEEKVVYDRSSSKNIYLNVAVNTLKKLRSKTTPVSSALKSP
AVSVNRKAQSHEGVLGGRLAATTSFTINRSGKQQDMDLKGAILYKQLKKYLMTEEQLQEH
GYPRPDPEISGHAVVHNLPEKKNNDSFSKVCCRCGAEYRINANGSCVRKEECSHHWGRLR
RNRVPGGWETLYNCCSGAVGSPGCEVAKQHVQDGRKESLDGFVKTFSKRLPADGNGGVYA
LDCEMCYTKQGLELTRVTVITSELKVVYDTFVKPASKVVDYNTRFSGVTHDDLENTTITL
RDVQAVLLSMFSAESILIGHSLESDLFALKLIHSTVVDTAIVFPHRLGLPFKRALRNLMA
DYLKRIIQDNVGGHDSSEDAGACMELMIWKIKEDAKVKR
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgttgagatctaccgggttcttccgtggcattgactgcccgttttattgtgacaaaggg
aaagccggtccatatgggtgcagcagaccctactgtcacttcagacacagcaaacaaagg
cgagcatcctctgggataaacgatatcagaaagacaaaagcgctttcggcgagttcaaac
gatcaaggatatgatccattcagtccggaggttgaaagaccaggagaaaattgtaatgag
gagccaccatcaagcctgtcagagggtcaggatgtggacctgggcaccatggagctggag
ctggtcaatagggcaattgagactgttcgcagtgagatggagagagacaagaagaaactc
tctcagattggagatcaggaatatgagcccgcatctagctctgttaagagacatagaccc
actgctgcatcgtcccatcagggctatgatcctgggagctatcagatgggccaagcaact
gaatacaaccctaccccacgctccagtaaatataccttggactctgagaacagcagtagc
aatgcgctggagtacgtgccaactgctgtctccaaaacaagcattaaaaaggtgttacct
ccaccactgtctcgtgtgatgccacctcctactgtcaacaccaggtctgtcaagtgtaaa
tacacgctggataattccaaaccctccacggatatggagtatgaccctcttttaaactac
tctgctaagctgactgttaaagaacagagggctttgtgttcaagggaagaggggagaaag
agatttcaccccacagaaagggaaaaacaatctgaggatgaggaatatgttctaacagta
aagaaactaaggccattgccacctaaggcagacgtcccaaaatacacagctagtttttct
gaatccgatgaagaaagttctgggacagagtatcgtccgatgtccataagtcgactgcag
ctcaagggaatccacgcaggcttgaaacgagaaagagagtcaggtgatggaaattctggt
acattgagacagcaaaaaaagcaggactctaaaaccgaggatgtcttctcactgagtgaa
tcggaagactttgagttccaggctgtggacaggacatgcaaaataatggtagaaaaaaag
atgactgaaagtagccagtcgaaaagcaataaatatgaaaaagaggtgaaagacttgaat
aaaaagagtaacagtcacaaagaaaaacaaggaagttccagtagggacaagatgtcaaag
aattcaagtaaggggagtatgaaaaaagacaagacccaaggtaggattgtggaggggagc
agcaaacctaaagaaaagtcttcggagaaggtgcggaaagaaagtacggaggcaaagcac
agtgttgacaagaacaagcagtcaggaaagttgaaaagcgaccacagcaacaaggaaaaa
gataaaggaagctgtgactccaataagcccagaacattcaagccagtgaaaactgacaag
gaatcatccaaatccaaagacaacaaaaatggaaaacttgagaccagtggaaaggagcaa
aagagcagcaatagcagcagaagcaataaagaaaaaagtaaaaaaaacagctcagcctcc
aatcaaaaagaggcaagagagaccaaacagaggagtctaaagcatgtggatttgtttggt
gccgagagtgctgaggaggaagatgaaaggatagtgaggaagtcggcttctgcttttaaa
tggggaagccttgtaaataagaggaaaacctcagttacatcatcatctgaggatgattat
gagaatgatgatgattgtggtggagatgatgatgtaggagtggactactctagcctgcag
gctgagatggagaatgacttggacccgatggaggagtgtctacggatatttaatgaatct
aaagaggtgaagatggaagataaagggagacaagccaagcagccttcacaggagcaagag
gaggaggaagacaacaccgaaagcactttatcaactctctttcctggccagaagaagagg
gtgtcacattttaaagctcaaggaaaatcggagacatcactgaatgctgtgccgatacca
catcggaggctgactgcgcaggagatctgttaccagcgcatgcagaaggcccagcagcag
gcagcacagctggctgctgcagtaaagactgtgtctgcttccaccaaaccagttctgggg
ctctctggagcgaaacagagggtggcacaccagccaaatgcctcccttccctccccaaag
cctggcctaactaattccagcagacgggtgttatcacccaccacaacagtgactgatcag
gtttctgtgaaagctcatacatcagctggcatcccatcaaagaccacaaccacttcattg
cagaagagagtggctcatgcccctacactcaagagctctaccatgaagtgtcccatcatt
cctgctgaatttggggcaaaggtgccaactaatgtccgccagcgttatctcaacatcttc
atagacgagtgtctgaagttctatccctctgaacaaaaagcttttcagacagctctggag
gaggagaaggtggtgtatgacagaagcagcagtaagaacatttacctgaatgtagctgtg
aacacactgaagaaactccgcagcaagaccacacctgtgtcttctgccctcaagagtcca
gcagtatctgtgaatagaaaggcccaatcccatgaaggagtgcttggtggtcgacttgct
gccacaaccagcttcactatcaaccgttctggcaaacagcaggatatggaccttaaaggt
gccattctctacaaacaattgaagaagtacctaatgactgaggaacagctgcaggagcat
ggctaccccagacctgatcccgagatctcgggtcacgctgttgtccataacctcccagaa
aagaagaacaatgactctttttccaaagtgtgttgtcgatgtggtgctgagtacagaata
aacgctaatggcagctgtgtgcgtaaggaggagtgcagtcaccactggggaagactacgt
agaaatagagtgccaggaggttgggagaccctttataattgctgttctggtgcggttggt
tctcctggatgtgaagtagcaaaacaacatgttcaagatggccgtaaagagtctttagat
ggttttgtgaagacttttagcaaacggctacctgcagatggtaatggaggtgtctatgcc
ttggactgtgagatgtgctacacaaaacaaggcttggagctgaccagggtgactgtcatt
acctctgagctcaaggtcgtgtatgatacgtttgtcaagccggcgagcaaagtggtggat
tacaacacacggttctcgggtgtgactcatgatgatctggagaacaccaccatcaccctg
agagacgtgcaggcagtgctactgagcatgttcagtgctgaatccattctaatcggacac
agtctagagagtgacctctttgcacttaagcttattcacagcacggtcgtggacacggcc
attgtgtttcctcatcgcttgggtctgcccttcaaacgggcactacgaaaccttatggct
gactacctcaaacgaatcatacaggacaatgtgggggggcatgactccagtgaggatgcg
ggcgcctgcatggaactcatgatctggaagatcaaagaggatgcaaaggtgaagagatga
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