KEGG   Myxocyprinus asiaticus (Chinese sucker): 127424850
Entry
127424850         CDS       T08782                                 
Name
(RefSeq) nucleoporin SEH1 isoform X1
  KO
K14299  nucleoporin SEH1
Organism
masi  Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03013  Nucleocytoplasmic transport
masi04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:masi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    127424850
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    127424850
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:masi03019]
    127424850
   04131 Membrane trafficking [BR:masi04131]
    127424850
Messenger RNA biogenesis [BR:masi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     127424850
Membrane trafficking [BR:masi04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    127424850
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 WDR55 WDR90_beta-prop_4th EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N Beta-prop_TEP1_C Beta-prop_IFT140_1st Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 127424850
NCBI-ProteinID: XP_051526298
LinkDB
Position
34:complement(8581731..8607478)
AA seq 364 aa
MFVAKSIAADHKDLIHDVSYDFHGRRMATCSSDQSVKVWDKGDNGEWHCTASWKTHSGSV
WRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKQRCQSHWIKRTTLVDSRTSVTDVK
FAPKHMGLMLTTCSADGVVRIYEAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHPP
MIAVGSDDSNVTYSGKVQIYEYNENTRKYAKAETLMTVTDPVHDIAFAPNLGRSFHVLAI
ATKDVRIFKLVPLRRESATSSGPTKFEVQVMAQFDSHNSQVWRVSWNITSTLLASSGDDG
CVRLWKANYMDNWKCTGILRGDGSPVNGSSGHTAALSAVSVSGAAQMVVGAASAGRKKAQ
LMPG
NT seq 1095 nt   +upstreamnt  +downstreamnt
atgttcgtggcgaagagtatcgcggcggatcataaagacctcattcacgatgtgtcttat
gactttcatggtcggaggatggcgacctgctccagtgatcagagtgtcaaggtctgggat
aaaggtgacaatggtgaatggcactgcactgccagctggaagacacatagtggatctgtg
tggagagtaacctgggcgcaccctgagtttggtcaagtgttggcgtcttgttcgtttgat
cgcactgcggctgtgtgggaggagatagtcggcgaatccaatgataaacagcgctgtcaa
agtcactggatcaagagaaccacactggtggacagtcggacatcagtaactgatgtgaag
tttgcaccgaagcacatgggtctgatgctgaccacctgctctgcagacggggtggtgcgc
atctacgaggcccctgacgtgatgaacctcagccagtggtctctacagcacgagatctcc
tgcaagctctcctgctcctgcatctcctggaacccatccagttccagagctcatcctcca
atgatagctgtcggcagcgatgacagtaacgtgacatacagtggcaaagtacaaatttat
gagtataatgaaaataccagaaagtatgccaaagcagagacactgatgactgtgactgat
ccagtacatgacatcgcctttgctcctaatctcgggagatctttccatgtgttggcgatt
gcgaccaaagacgtccgcattttcaaactcgtaccactaaggagagagagtgccaccagc
tctggtcccactaagtttgaggtgcaggtgatggctcagtttgacagtcataactctcag
gtgtggcgagtgagctggaacatcaccagcactctgctggcctcctctggagatgatgga
tgcgtgcgactctggaaagctaattacatggataactggaagtgcacagggatcctgaga
ggagatgggagtccagtaaacggctcctcaggacacactgcagctctgagcgctgtgagc
gtttctggagctgcccagatggttgttggggcggcttctgctgggagaaaaaaagctcag
ctgatgccaggctaa

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