Myxocyprinus asiaticus (Chinese sucker): 127424913
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Entry
127424913 CDS
T08782
Name
(RefSeq) SWI/SNF complex subunit SMARCC1-like isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127424913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
masi03021
]
127424913
03036 Chromosome and associated proteins [BR:
masi03036
]
127424913
Transcription machinery [BR:
masi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127424913
Chromosome and associated proteins [BR:
masi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
127424913
PBAF complex
127424913
GBAF(ncBAF) complex
127424913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
DUF919
DUF2476
Motif
Other DBs
NCBI-GeneID:
127424913
NCBI-ProteinID:
XP_051526418
LinkDB
All DBs
Position
34:complement(31180754..31196686)
Genome browser
AA seq
972 aa
AA seq
DB search
MATQPLGSASAGPTTSQAGCSSSFSRRMDGGPCCKLWESSEIISQMETVRSWIGKHYKKY
VQTDAPSSKSLSGLVTQLLQFHEDSFGCRANNPGFTKLQAKCFLDLRPAGALCHILGSVY
KFKTEQGWRRFDLQNPSRVDRNIEMFVCVEKTLIQNNLLSRPVVYLSPDLEQKQALKLKD
IVMRHQGTVTEEKSQATHQIYPSPSTEDEEEWLRPVMRLDQQVMVHWGMFPDSYDSLMSA
SDVDGEVEEPPNPDRCWKVHAKWVLDTDTFNEWMNEEDYEIDENGNSVSFRRRIYQSEGE
QKSVKKRRRSPSPSSSESRKKGGKKGSWPYKRRGQQEEEEPEEDLTKDMEDPTPVPNMEE
VILPKNVNLKKDSENTPVKGGIMADLDDQEEDLLSGVRDEEEQREFGRGMEGEESATEQT
HHIIVPTYASWFDYNCIHQIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTFRLNPQEYL
SSTSCRRNLTGDVCALVRVHSFLEQWGLINYQVDAESRPLPMGPPPTPHFNVLTDTPSGL
VPLQHRPLQVSASQHMLHFPEKSREKPSDLQNFGLRIDIYAKKHPKSKGASAGREWTEQE
TLLLLEALQMYKDDWNKVSEHVGSRTQDDCILHFLRLPIEDPYLENSEASMGPLAYQPVP
FSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRAREEAPPEFFNASFHKSQRVGHN
LDPAFTLQPSGIAELEPDQLEKTDGTGIEKMIAESEQHIKPEVDGVLGKGQRVKNEEKEE
SEGERGEESTAEESFELGHGQGEGEDMGRCAELELVEGNIATAAAAALASAATKAKHLAA
VEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLSERQNFHLEQ
VKYAEVKARQHMEQQQQAGASQSSSTAYNPLHHGRSVGSAGTGQVMGARHPGAPNGMYQT
PPSSQADGAASM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggccacacaacctctaggatctgcttctgcgggacctactacaagtcaagccggttgt
agctcctcattcagccgaagaatggacggtggaccgtgctgtaaactctgggagagctca
gaaataatctctcagatggagacggtccgcagctggatcggaaagcattataaaaagtat
gtgcagactgatgctccctccagcaagtctctgtctgggctggtcacccagctgctgcag
tttcatgaagactcttttggctgccgagcaaataatccaggctttacaaaactccaggca
aagtgttttctagatctgcggcccgccggtgctctctgccatattctgggatcagtgtac
aagtttaagacagaacagggctggagacgctttgatctgcagaacccatctagagtggat
cgcaatatagaaatgtttgtctgtgtggagaaaacactgatacagaataatctgttaagc
agacctgtagtgtacctgtcccctgacttggaacagaagcaggctctcaaactcaaagac
atagtcatgcgacaccagggcacagtgacagaagagaagtcacaagctacccaccagata
tacccatcaccctccacagaagatgaagaagagtggctaagaccagtcatgcgattagat
cagcaagtaatggtgcattggggcatgttcccagatagttatgactctcttatgtcagca
agtgatgtggatggagaagtggaggaaccccctaacccagacaggtgctggaaggttcat
gccaaatgggtcctcgacactgacacatttaatgagtggatgaacgaggaagactatgag
atagatgaaaatgggaatagtgtgagcttccggcggcgtatctaccaaagtgaaggggaa
cagaaatctgtgaagaagcggcgacgctcaccttctccatcatcctctgagtctaggaag
aagggaggaaagaaaggttcatggccatataagaggcgtggacaacaagaagaggaggag
ccagaggaagacctcactaaagacatggaggatccaacacctgtccctaacatggaagaa
gttatactgcctaaaaatgtgaatctaaaaaaagacagtgaaaacaccccagtcaaagga
gggataatggctgacttagatgaccaggaagaagaccttctctctggagttagagatgaa
gaggaacagagggagtttggccgtgggatggagggagaggagagtgctacagaacaaaca
catcacatcattgtacccacctatgcatcctggtttgactacaactgtattcatcagata
gagagacgagcactgcctgagttctttaatggcaaaaataagtccaaaacaccagaaata
tatctggcataccgcaacttcatgattgacacatttcggctaaaccctcaagagtatttg
tcctcaacctcctgcagacgaaacctgacaggagatgtttgtgcacttgtaagagttcat
tcatttttggagcagtggggtttgataaattatcaggtggatgcagagagtcgacccctc
cctatgggcccacccccaacaccacactttaacgttcttacagacactccttcaggactt
gtcccgctacagcacagacccttacaggtttcagcctctcagcatatgttgcatttccca
gaaaagtccagagaaaagccatctgacctacagaactttggtctgcggatagacatttat
gccaagaaacatcctaagagtaaaggtgcaagtgcagggagagaatggacagaacaagaa
acactgttgcttttggaggctttacagatgtataaagatgactggaacaaggtgtcggaa
cacgtgggcagccgtacgcaggatgactgtattcttcacttcttgcggttgcctatagag
gacccgtatctagagaactctgaagcctctatgggcccactagcctatcagcctgttccc
ttcagccagtcagggaaccctgtaatgagcactgttgctttccttgcgtctgtggtcgac
cctcgagtggcctctgcagccgccaaggcagcgttggaggagttctcgagagcaagagag
gaggccccgccagaattcttcaacgccagctttcacaaatcacagagagttgggcataat
ttagatcctgcctttaccctacaaccaagcggtattgcagaacttgagccagaccaatta
gaaaagactgatgggactggtatagaaaagatgattgccgaatctgagcagcatataaag
cctgaggttgatggtgtcttgggaaagggacagcgtgtgaaaaatgaggagaaagaagaa
agtgaaggagagagaggagaggagagcactgcagaggagagttttgagttgggccatggc
caaggggagggggaggacatggggagatgtgcagagcttgagctggtggagggaaacatc
gccacagccgctgctgcagcactagcctcggctgctaccaaagcaaagcatttggctgca
gtggaagagagaaagattaagtctctggtggctctcctggttgaaactcagatgaaaaag
ttggagatcaaactgagacactttgaagagctggagaccattatggatcgagaaaaagag
gcgttggagcagcagagacagcagttattgtctgaaaggcagaacttccacctggagcag
gtgaaatatgctgaggtgaaagcacgacagcacatggaacagcagcagcaagcaggagct
tcacagagcagcagcacagcatataaccctcttcaccatggtcgttcggtgggcagtgct
ggtactggacaggtgatgggtgcacggcaccccggagctccaaatggcatgtaccaaact
ccaccttcctcacaggctgatggggccgcatccatgtga
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