Myxocyprinus asiaticus (Chinese sucker): 127424934 Help Entry 127424934         CDS       T08782                                  Name (RefSeq) helicase SKI2W-like   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism masi  Myxocyprinus asiaticus (Chinese sucker) Pathway masi03018   RNA degradation Brite KEGG Orthology (KO) [BR:masi00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     127424934  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:masi03019]     127424934 Enzymes [BR:masi01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      127424934 Messenger RNA biogenesis [BR:masi03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      127424934   mRNA degradation factors    3'-5' decay     Ski complex      127424934 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DSHCT Ski2_N MTR4_beta-barrel DEAD Helicase_C DEXQc_Suv3 ResIII MTR4-like_stalk DUF1299 DUF3516 HTH_23 HAS-barrel Motif Other DBs NCBI-GeneID:  127424934 NCBI-ProteinID:  XP_051526460 LinkDB All DBs Position 34:complement(12291567..12321959) Genome browser AA seq 1249 aa AA seqDB search MDRIDLPPVGPDDLPLSLLEMGCSGRFELITHPLPKNKPLPPQSTLPHGLPPTCLDLKTE VEKRFLRDPAWLPIHDVDDAFNKFLKISKRNREVDSLLHCSLSPLHSGLSVVRDPTTGML LDFTEVLLEDTGLSAKNSLSLQRQPGPPSESLRGSNTNYPFLPAGMEELTLEQIKNKSEM EEDIDFEKDLLTVPPGLKAGMDFSEKEAKTMKGEVNLLSLLSTFDDVVDTLPEEKEGNSQ KEETVKLPRSNSLEDLGIKDSSVSPSQPPANMVGVTEQKKKTQGEEKGDNKKWAIPVDVT SPCNDFYKRIPDPAFKYPFELDVFQKQAILRLEAHDSVFVAAHTSAGKTVVAEYAIALSQ KHMTRTIYTSPIKALSNQKFRDFKNTFGDVGLLTGDVQLNPEASCLIMTTEILRSMLYNG SEVIRDLEWVIFDEVHYINDAERGVVWEEVLIMLPEHVSIILLSATVPNSVEFSEWIGRM KKRPIYVISTVKRPIPLEHYLYTGNSTKTQKELFLLLDATGNFITKGYYAAVEAKKERTS KHAQSFGTKNASQNTTASQDRAIWQTLLNYLSQRQQTPVVAFTFSRTRCDENARSLTSLD LTSSVEKSEIHSFLQKSLSRLRGGDRQLPQILLMRDLLKRGIGVHHSGILPILKEVIEML FSRGLVKVLFATETFAMGVNMPARTVVFDSIRKHDGTGFRNLLPGEYIQMAGRAGRRGLD ATGTVIILCKAGIHDMGDLHSMMLGKPTVLQSQFRLTYTMILNLLRVEALRVTDMMRRSF SESHRDTQAHEKRISELKNTLSSLPPLDTEGQLSDLLSYYHTITELRITTEILQRAVLES VNGLKALSVGRVVIVNNVQHHNTLGVILQVSNDAVNRMFTALIICEKGNEELGADRSNKT LPPVYSATLFIPEGPCSHTVQKLKLQDISAITTKTLKVIPERIIDNYNKRQQPRFRLDPP GQAISTATQELLRLAEANPGGIATLDPVNDLHLKGVDVVEGVIRQRVLQDCLKDFHCIHS PTFTEQFARVQERMSVQEELDKLLFLVSDQSLTLLPEYHQRIKVLESLQYVDSTGAVQLK GRVACQISSHELLLTELLFENTLSPLAPEESAALLSCLIFTQNTQIDPHITNTLQEGINQ VLCVAQRIGDLQRDCGITQTAEDFVSQFKFGLTEVVYCWARGMPFAEIAELTDVQEGTIV RCIQRLDEVLKEVRQAARIVGDSVLGSKMERASLAIRRDIVFTASLYTH NT seq 3750 nt NT seq  +upstreamnt  +downstreamnt atggacagaatagatttgcccccagtgggtccagatgatttgcccctgtctctgctggag atgggctgctctgggagatttgagctcatcacacacccactgcccaagaataaacccctg cctccacagagcacactgccccatgggctaccccccacctgtctggatctgaaaacagag gttgagaagcgttttctcagagatcctgcttggctccccatacatgatgtggatgacgcc ttcaacaagttcctcaagattagtaagagaaatagagaagtggattctcttctgcactgc tctctgtctccactgcactctggtctgtctgtagtcagagaccccaccaccgggatgctg ctggattttactgaggtgttattagaggacacagggttatctgcgaagaattcactctca ttacaaagacagccaggacctccatcagagagccttagagggagtaatacaaactaccca tttttgccagctggaatggaagaactgacattagagcagataaaaaataagtcagaaatg gaagaggacattgactttgagaaagatttgttgactgttcctcctggactgaaggctggt atggattttagtgagaaagaagccaaaaccatgaagggtgaggtgaacttgctgtcgctc ttgtcaacgtttgatgatgtcgttgacactctgccagaggaaaaagagggaaattcacaa aaagaggagaccgttaaacttcccagaagcaacagcctggaggacctgggaattaaagat tcatctgtctctccttctcagcctccagcaaacatggttggtgtgactgaacaaaagaaa aaaacacagggtgaggagaagggagacaataaaaaatgggcaattccagtggatgtcacc tcaccctgtaatgacttctacaaacgcatccctgatccagcctttaagtatccctttgag ctggatgtgtttcagaagcaggctattctccgtcttgaagctcatgactctgtgtttgta gcggctcacacctcagccggcaaaactgtggtggctgaatatgccatcgcactctcccag aagcacatgaccaggacgatctacacatcccccattaaggccttgtccaatcagaagttc cgagacttcaagaacacatttggtgatgtggggcttttgactggagatgtgcagctgaac ccagaagcctcttgcctgatcatgactacagagattttaaggtctatgctctacaatgga tcagaggtcattcgggacctggagtgggtaattttcgatgaggttcattacatcaatgat gcagagagaggtgtggtgtgggaggaagtgctcataatgttgccggagcatgttagcatc attctgctaagtgccacagtgcccaactctgtggagttcagtgaatggatcggtcgtatg aaaaagcggcccatctatgtgatcagcactgttaaaaggcccatccctctagaacattat ctctacacaggcaacagcaccaagactcagaaagagctctttctgttgctggatgccaca ggaaacttcatcaccaaaggctactatgctgcagtggaggccaagaaggaacgtacaagt aaacatgcacaatcttttggcacgaagaacgcatcacagaacacaacagccagtcaggat cgagcaatatggcagacgctcttaaattatctgtctcagaggcagcagactccagtggtg gcgttcacattctcacgtacacgctgcgatgaaaacgcacgatctttgacctctctggat ctgaccagctccgtagaaaagagcgagatccactccttcctccagaagagtctgagcagg ttgagaggaggagatcggcaactgccgcagattctgttgatgcgggatttgctaaagaga gggattggcgttcaccacagtggcatcctgccaatcctgaaggaggttattgagatgctc ttctccagaggtttagtgaaggtgttgtttgccacagagacatttgctatgggcgtgaac atgcccgccaggactgttgtgtttgacagcatcagaaaacacgacggcactggcttcaga aacctgctgcctggtgagtatattcagatggcgggccgtgctggcaggagaggtttggat gccacaggaacagttataatcctctgtaaggctggaattcatgatatgggagatcttcac tccatgatgctggggaaaccgacagtgctgcagtctcagttcagactgacctacacgatg atcctgaacctgctgcgtgtggaggccctgagggtcactgacatgatgaggaggagcttt tctgagagtcacagagacacacaggcccatgaaaaaagaataagcgagctgaaaaacact ctctcttctctccctccactggacaccgagggtcagttatctgacttactgtcatattac cacaccatcacagagctgcgcattaccacagagatcctgcagcgagctgtgctggagtca gtgaatggactcaaagctctgtctgttgggagggtggtgattgtgaacaatgtccagcat cacaacaccctgggagtcattctacaggtgtccaatgatgctgtaaatcgcatgtttacc gctctcattatctgtgagaagggtaatgaggagcttggtgctgataggtcaaataaaacc ttaccccccgtctacagtgctacactgtttattccagagggaccctgcagtcatacagtg cagaagctgaagctgcaggacatctctgccatcacaaccaaaaccctcaaagtcattcca gagagaatcatcgacaactacaataaaaggcaacagccacgcttcagactcgatccacca ggtcaggccatttctacagcaacacaagagctcctacgattggccgaggccaatccaggc ggcatagcgacccttgatcctgtgaacgacctgcacctgaagggtgtggatgtggtggag ggggtgattagacagcgagtgttacaagactgcctgaaagacttccactgtatccactca cccacattcactgaacagtttgcacgcgtacaggagaggatgagtgtacaggaagagctg gataaacttctgtttcttgtgtctgatcagtcattgacactgctgccagagtaccatcag agaatcaaggtgctggaatctctgcagtatgtggacagcacaggggcagttcagttgaag gggcgagtggcgtgtcagatcagcagtcatgagctgttgctgacggaactcttgtttgag aacacgctgagtcctctcgcccctgaggaaagcgccgccctgctgtcctgcctcatcttt acacagaatacccagatagatccgcacatcaccaacacgctacaggagggcatcaatcaa gtactctgcgtggcacagcgtattggcgatctgcagagggattgtggaataactcagact gctgaagactttgtgtcccagttcaagtttggcctgactgaggttgtgtactgctgggca cgaggcatgccgtttgctgagattgctgagctgacagacgtgcaggagggaacgatcgtg cgctgtatccagaggctggatgaggtgctgaaggaagtgaggcaggccgctcgcattgta ggtgactccgtcctgggcagcaagatggagagagcctcgctggccatacgcagagacatt gtgtttaccgcatcactctatacacactga

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