Myxocyprinus asiaticus (Chinese sucker): 127424991
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Entry
127424991 CDS
T08782
Name
(RefSeq) collagen alpha-1(IX) chain-like
KO
K08131
collagen type IX alpha
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04510
Focal adhesion
masi04512
ECM-receptor interaction
masi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127424991
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127424991
09142 Cell motility
04820 Cytoskeleton in muscle cells
127424991
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
masi00535
]
127424991
Proteoglycans [BR:
masi00535
]
Extracellular matrix (ECM) proteoglycans
Others
127424991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
127424991
NCBI-ProteinID:
XP_051526520
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Position
34:39092494..39140974
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AA seq
995 aa
AA seq
DB search
MTPRFLKSLLQSEKHLGTAEDELEGEDISGPKDKTSPSIQVLASPLRDRNMAPHLSISRS
RMWQRVLPGCLAHTLLFVLLYAPALAQLDLNRLDGDTVCPTMKNGQDDLPGFDLITQFQL
DVIPMRGVRKVEGSTPLQVAYRLDREANFQIPTRLNFPRGFPDEYSFMTTFRMIKNTVNK
VWNIWQVVDEDGLKQAGMRLNGDQQALEFFLTTMEGDLQTVTFPGLSVLFNTKWHKVMVG
VEKELVTLYVDCQPVDQKPIKRKGYVNTEGDTLIGRLDSDPNTSVVFELQWMLIHCDPKR
AQRESCTELPLTEMYANAEPDPKPIPGPPGPEGPKGPRGPPGEDGQDGRDGVPGIPGTPG
AQGSKGDRGEIGLPGQRGLQGLPGPVGSMGPMGPRGPVGERGLPGFPGPAGPPGPETVGP
PGIPGKPGTPGDEGNIGPEGPPGPRGINGLPGPPGLPGPPGPAGPPGAGNPEGSGETCQA
TCPAGPQGLPGLPGMKGHRGLPGVDGVPGTQGDKGERGAAGEPGPTGRPGEDGQRGPIGF
PGAHGDKGDRGPPGFNGIPGPTGPPGSPGVEGIRGRQGHPGPKGDDGAIGAPGEKGATGA
KGDTGEPGKHGSDGAPGALGEKGEPGLPGAIGVRGIVGIPGLPGKQGLVGPAGQKGETGA
QGPTGPIGLPGKDGAAGPAGEDGTPGAKGATGESGKQGPVGPAGPPGIEGDKGDQGLMGP
RGIKGHTGHKGDQGPIGPVGPKGSEGDPGIAGEPGVKGDQGPPGIPGTKGESGEKGQRGA
TGADGRPGQPGHEGLTGPQGARGLEGERGLMGPPGPRGLPGPKMSDEKIREMCSAIVEEH
LDAYKKELAKKPLSLGAPGTPGPMGPPGPPGPAGAAGEAGPKGPVGPKGHPGYYGLPGKP
GAKGDAGLKGDKGDNGIGIPGIPGEPGPQGPAGKPGIGKDGANGARGEAGVPGTPGTPGA
RGPPGTPGLCDPSTCFRPQPLYLVGGKKSVNIKGP
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgacgcccagattcctcaaaagtcttcttcagtcagagaagcacctgggtactgctgag
gacgaattggagggtgaagacatctctggaccaaaggacaaaacttctccatctattcag
gttctcgcatcccctttgagggacagaaacatggctcctcacctcagcataagcaggagt
cggatgtggcagcgggtgttgccagggtgtttagcacatacacttctctttgtgctgctg
tatgcaccagctctcgctcagctggatttgaacagattagatggcgacacagtgtgcccc
accatgaagaatggacaagacgaccttccagggtttgatctgatcacacagtttcaatta
gatgtgatcccaatgagaggtgtcagaaaggtagaaggttccactcccctccaggtggca
tacagactcgaccgtgaggctaacttccagattccaaccaggctgaactttccaagggga
ttcccggatgaatattctttcatgaccaccttccgcatgataaagaacactgtaaacaag
gtgtggaacatctggcaagtggtggatgaagatggtttgaagcaggcaggtatgcgtctc
aacggagaccaacaggctctggagttcttcctcacgacgatggaaggagatctccagacc
gtcacctttccgggtctttctgtgctcttcaataccaaatggcacaaggtgatggtcggt
gtggagaaggaactggtgacgctgtatgtggactgtcaaccggtagaccagaaacccatc
aagaggaaaggttacgtcaacacggagggagacactctgattggacgactggattctgat
cccaacacatctgttgtgtttgagttgcagtggatgctgattcactgtgacccaaagaga
gcccagagagaaagctgcactgaacttcctctgactgagatgtatgccaatgctgagcca
gaccccaagccaatccctggtccccctggccctgagggtcccaaagggcctcgcggaccc
ccaggagaggatggtcaagatgggagagatggtgttccaggcatcccaggaactccagga
gcgcagggcagtaaaggagacaggggtgagattggacttccaggacagaggggactgcag
gggctgccggggccagtgggatctatgggccccatggggccacgaggaccagtgggagaa
agaggtcttcctggtttccctggacctgctggaccccctggaccagagactgttggacct
ccaggaattccagggaagcccggaactccaggggatgaaggaaacatcggaccagagggc
cctcctggaccaagaggcattaatgggctcccaggacccccggggctcccaggaccacca
ggacccgcagggcctcccggtgctggaaatcctgagggaagtggggagacctgtcaggct
acatgcccggctggacctcagggactgcccggtctgccagggatgaagggacaccgcggc
ctgcctggagtggacggcgttccaggtactcaaggtgacaagggagagcgaggagccgct
ggagagccaggtcctactggacgcccaggagaagatggtcagcgaggtccaattggattt
cctggagctcatggggataaaggagatcggggtcctccaggatttaacggtatcccagga
ccaacaggaccaccaggatctccaggtgttgaaggcatcagagggcgacagggacatcct
ggacctaaaggagatgatggtgcgatcggagccccaggcgagaaaggtgctactggtgcc
aagggtgacactggtgagccaggaaagcatggttctgatggagcaccaggagctctggga
gaaaagggagagccagggctgcccggagccatcggtgtcagaggaattgtaggaattccc
ggtttgccaggaaaacaaggactcgtggggcctgcaggtcaaaagggtgaaactggcgct
caaggaccgactggtccaattgggcttcctggtaaagatggtgcagctggacccgcagga
gaagatggaactccaggagctaaaggagccactggtgaatcaggaaaacagggtcccgtc
ggccccgcagggccaccaggaatagagggagataaaggtgaccagggacttatgggtcct
cgtggaatcaaaggtcacacgggtcataaaggagaccagggtccgattggtccagttggt
cctaaaggaagtgagggcgatccaggtattgcgggagaaccaggcgtgaagggtgatcag
gggcctcctgggattcctggcaccaaaggagagagtggagagaaaggccaaagaggagct
acaggtgctgatggtcgtccaggacagccaggccatgagggtctgaccggcccccagggg
gcgagaggtctggagggggagagaggactgatgggaccccctggtcccagaggtctacct
ggccccaaaatgagtgacgagaagattcgtgaaatgtgttcagctattgttgaagaacat
ttagatgcctataagaaagaactggccaagaagcctctatctcttggggctcctggaact
ccaggacccatggggccacctggaccccccggaccagcaggggctgcaggagaggccgga
cccaaaggtcctgtgggccccaaggggcatccaggatactatggccttcctggaaaacca
ggagccaaaggcgatgcaggactaaaaggggataagggagataatggaattggaattcca
ggaattccgggagaacccggaccacaaggaccagctggcaagcctggcattggtaaggat
ggtgccaacggtgccagaggagaagcaggtgtacctggaacccctggtacccctggcgca
agaggacccccaggcacccctggtctctgtgatccttcaacctgcttcaggcctcaaccg
ctttatctggttggtgggaaaaagtcagtgaacatcaagggtccatga
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