KEGG   Myxocyprinus asiaticus (Chinese sucker): 127424991
Entry
127424991         CDS       T08782                                 
Name
(RefSeq) collagen alpha-1(IX) chain-like
  KO
K08131  collagen type IX alpha
Organism
masi  Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04510  Focal adhesion
masi04512  ECM-receptor interaction
masi04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:masi00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    127424991
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    127424991
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    127424991
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:masi00535]
    127424991
Proteoglycans [BR:masi00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   127424991
SSDB
Motif
Pfam: Collagen Laminin_G_3 Laminin_G_2
Other DBs
NCBI-GeneID: 127424991
NCBI-ProteinID: XP_051526520
LinkDB
Position
34:39092494..39140974
AA seq 995 aa
MTPRFLKSLLQSEKHLGTAEDELEGEDISGPKDKTSPSIQVLASPLRDRNMAPHLSISRS
RMWQRVLPGCLAHTLLFVLLYAPALAQLDLNRLDGDTVCPTMKNGQDDLPGFDLITQFQL
DVIPMRGVRKVEGSTPLQVAYRLDREANFQIPTRLNFPRGFPDEYSFMTTFRMIKNTVNK
VWNIWQVVDEDGLKQAGMRLNGDQQALEFFLTTMEGDLQTVTFPGLSVLFNTKWHKVMVG
VEKELVTLYVDCQPVDQKPIKRKGYVNTEGDTLIGRLDSDPNTSVVFELQWMLIHCDPKR
AQRESCTELPLTEMYANAEPDPKPIPGPPGPEGPKGPRGPPGEDGQDGRDGVPGIPGTPG
AQGSKGDRGEIGLPGQRGLQGLPGPVGSMGPMGPRGPVGERGLPGFPGPAGPPGPETVGP
PGIPGKPGTPGDEGNIGPEGPPGPRGINGLPGPPGLPGPPGPAGPPGAGNPEGSGETCQA
TCPAGPQGLPGLPGMKGHRGLPGVDGVPGTQGDKGERGAAGEPGPTGRPGEDGQRGPIGF
PGAHGDKGDRGPPGFNGIPGPTGPPGSPGVEGIRGRQGHPGPKGDDGAIGAPGEKGATGA
KGDTGEPGKHGSDGAPGALGEKGEPGLPGAIGVRGIVGIPGLPGKQGLVGPAGQKGETGA
QGPTGPIGLPGKDGAAGPAGEDGTPGAKGATGESGKQGPVGPAGPPGIEGDKGDQGLMGP
RGIKGHTGHKGDQGPIGPVGPKGSEGDPGIAGEPGVKGDQGPPGIPGTKGESGEKGQRGA
TGADGRPGQPGHEGLTGPQGARGLEGERGLMGPPGPRGLPGPKMSDEKIREMCSAIVEEH
LDAYKKELAKKPLSLGAPGTPGPMGPPGPPGPAGAAGEAGPKGPVGPKGHPGYYGLPGKP
GAKGDAGLKGDKGDNGIGIPGIPGEPGPQGPAGKPGIGKDGANGARGEAGVPGTPGTPGA
RGPPGTPGLCDPSTCFRPQPLYLVGGKKSVNIKGP
NT seq 2988 nt   +upstreamnt  +downstreamnt
atgacgcccagattcctcaaaagtcttcttcagtcagagaagcacctgggtactgctgag
gacgaattggagggtgaagacatctctggaccaaaggacaaaacttctccatctattcag
gttctcgcatcccctttgagggacagaaacatggctcctcacctcagcataagcaggagt
cggatgtggcagcgggtgttgccagggtgtttagcacatacacttctctttgtgctgctg
tatgcaccagctctcgctcagctggatttgaacagattagatggcgacacagtgtgcccc
accatgaagaatggacaagacgaccttccagggtttgatctgatcacacagtttcaatta
gatgtgatcccaatgagaggtgtcagaaaggtagaaggttccactcccctccaggtggca
tacagactcgaccgtgaggctaacttccagattccaaccaggctgaactttccaagggga
ttcccggatgaatattctttcatgaccaccttccgcatgataaagaacactgtaaacaag
gtgtggaacatctggcaagtggtggatgaagatggtttgaagcaggcaggtatgcgtctc
aacggagaccaacaggctctggagttcttcctcacgacgatggaaggagatctccagacc
gtcacctttccgggtctttctgtgctcttcaataccaaatggcacaaggtgatggtcggt
gtggagaaggaactggtgacgctgtatgtggactgtcaaccggtagaccagaaacccatc
aagaggaaaggttacgtcaacacggagggagacactctgattggacgactggattctgat
cccaacacatctgttgtgtttgagttgcagtggatgctgattcactgtgacccaaagaga
gcccagagagaaagctgcactgaacttcctctgactgagatgtatgccaatgctgagcca
gaccccaagccaatccctggtccccctggccctgagggtcccaaagggcctcgcggaccc
ccaggagaggatggtcaagatgggagagatggtgttccaggcatcccaggaactccagga
gcgcagggcagtaaaggagacaggggtgagattggacttccaggacagaggggactgcag
gggctgccggggccagtgggatctatgggccccatggggccacgaggaccagtgggagaa
agaggtcttcctggtttccctggacctgctggaccccctggaccagagactgttggacct
ccaggaattccagggaagcccggaactccaggggatgaaggaaacatcggaccagagggc
cctcctggaccaagaggcattaatgggctcccaggacccccggggctcccaggaccacca
ggacccgcagggcctcccggtgctggaaatcctgagggaagtggggagacctgtcaggct
acatgcccggctggacctcagggactgcccggtctgccagggatgaagggacaccgcggc
ctgcctggagtggacggcgttccaggtactcaaggtgacaagggagagcgaggagccgct
ggagagccaggtcctactggacgcccaggagaagatggtcagcgaggtccaattggattt
cctggagctcatggggataaaggagatcggggtcctccaggatttaacggtatcccagga
ccaacaggaccaccaggatctccaggtgttgaaggcatcagagggcgacagggacatcct
ggacctaaaggagatgatggtgcgatcggagccccaggcgagaaaggtgctactggtgcc
aagggtgacactggtgagccaggaaagcatggttctgatggagcaccaggagctctggga
gaaaagggagagccagggctgcccggagccatcggtgtcagaggaattgtaggaattccc
ggtttgccaggaaaacaaggactcgtggggcctgcaggtcaaaagggtgaaactggcgct
caaggaccgactggtccaattgggcttcctggtaaagatggtgcagctggacccgcagga
gaagatggaactccaggagctaaaggagccactggtgaatcaggaaaacagggtcccgtc
ggccccgcagggccaccaggaatagagggagataaaggtgaccagggacttatgggtcct
cgtggaatcaaaggtcacacgggtcataaaggagaccagggtccgattggtccagttggt
cctaaaggaagtgagggcgatccaggtattgcgggagaaccaggcgtgaagggtgatcag
gggcctcctgggattcctggcaccaaaggagagagtggagagaaaggccaaagaggagct
acaggtgctgatggtcgtccaggacagccaggccatgagggtctgaccggcccccagggg
gcgagaggtctggagggggagagaggactgatgggaccccctggtcccagaggtctacct
ggccccaaaatgagtgacgagaagattcgtgaaatgtgttcagctattgttgaagaacat
ttagatgcctataagaaagaactggccaagaagcctctatctcttggggctcctggaact
ccaggacccatggggccacctggaccccccggaccagcaggggctgcaggagaggccgga
cccaaaggtcctgtgggccccaaggggcatccaggatactatggccttcctggaaaacca
ggagccaaaggcgatgcaggactaaaaggggataagggagataatggaattggaattcca
ggaattccgggagaacccggaccacaaggaccagctggcaagcctggcattggtaaggat
ggtgccaacggtgccagaggagaagcaggtgtacctggaacccctggtacccctggcgca
agaggacccccaggcacccctggtctctgtgatccttcaacctgcttcaggcctcaaccg
ctttatctggttggtgggaaaaagtcagtgaacatcaagggtccatga

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