Myxocyprinus asiaticus (Chinese sucker): 127425310
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Entry
127425310 CDS
T08782
Name
(RefSeq) CCR4-NOT transcription complex subunit 3b
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127425310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127425310
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127425310
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
127425310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
LepA_C
Motif
Other DBs
NCBI-GeneID:
127425310
NCBI-ProteinID:
XP_051527107
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All DBs
Position
34:34383240..34410505
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AA seq
889 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWKKLHNAANANQKEKYESDLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKIVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLANTIDTLNMQVDQFESEVESLSVLTKKKKGEKEKQDRIEELKRLIERHRYHI
LMLETILRMLDNESLQVDSIRKIKDDVEYYLDSSQDPDFEENEFLYDDLDLEELPQPLVA
TSPGHGEDEMFQHSSSTPTSTTSSSPIPPSPATCTTNSEDEKKRGRSTDSEISQSPNKNG
NPSSSLSSSSSLSSSSGASSNSLISMANIASSGSSTSGGSSLLGSLGGSGSYSSATQQQT
QQSQQPHQSKNSISSQSNVNSASSSNSILFPTLTSTSPPNTSTLGSLTSNSQSQPLSGTG
SASGMGIGKGTTSSSAANQIPGLVLSGMPASLSSMTGFLSGSNPAPYAQAAAAGAVGSGL
SATIGTNVSSTNSSGVVTSVGTNGSLGSTSLLDSTSLLGSGSGVLGLGSMQSAVEPLPLV
APSPVGGGLSSGSSVGVIGSNAGTSGTGSATAVGSAVLPRPPSAPKQNGGTSYSAVVADS
MSDSALNSASQSQNSQSSSLNSITNQLKDSGSSLLGSMTLPPSLPSYSESKPGAGSLLNG
PHSYTQAADTIKPQEPLSSLKSMAERVAQGSGLEGELSALHITTDIFPSSTAPSGPPAAP
QPAQSEVNIPPSLGVCPLGPAPLSKEQLYQQAMQESAWTHMPHPSDSERIRQYLMRNPCP
TLPFHHQVPPPHSDTVEFYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMM
WFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaaagaaaacttcaaggtgaaatagacagatgtttgaaaaaagttgcggaa
ggagtagagcagtttgaggacatttggaaaaagctccacaatgcagccaacgccaaccaa
aaagagaaatatgagtctgacctcaagaaagagataaaaaaattacagcgtcttcgagac
cagattaagacgtgggtcgcctccaatgagattaaagacaaaaggcagctagtagaaaac
cgcaaactcatagagacgcaaatggagcggtttaagattgtggaacgggagaccaaaaca
aaagcgtactctaaagagggactcggccttgctcagaaagtcgatcctgcacaaaaagaa
aaagaagaggtcgggcagtggctagcgaacacgatagacactttgaacatgcaagtggac
cagtttgagagtgaagtagaatcactttctgtcctgactaaaaaaaagaaaggagaaaaa
gagaagcaggatcgaatagaggaactgaaacgattgatagagaggcaccggtatcacatc
ctcatgctggagaccatcctcagaatgctggacaatgaatcgttacaggtggacagcatc
cgcaagatcaaagacgacgtagaatactaccttgattcttctcaggatcctgactttgag
gagaacgagttcctttatgacgaccttgatttggaggagctcccccagccactggtggcc
acgtctccaggtcacggagaggacgaaatgttccagcattccagttccacgccgacctca
acaacgtcatcttcgcccatacctccctccccggctacttgcactacgaattcggaagat
gaaaagaaaagaggtcgttcgacagacagtgaaatcagtcagtcacctaataagaacgga
aatccatcttcatccctatcctcctcctcttcattgtcctcatcttcgggagcctcttca
aactctttgatctccatggcaaatatcgccagcagtggaagctcgacatcagggggcagc
agcctcttaggcagcctgggcggctctggcagctacagttcagccacccagcaacaaacg
cagcaatcccaacaaccacaccaatccaaaaactccatttcatcccagtccaatgtcaac
tctgcctcctccagcaacagtatcttatttccaacactcacctccacttcgccacccaac
accagcacacttggctcacttacgtccaactctcaaagccagcctttgtcggggacaggt
tctgcctccggtatgggcatcgggaagggtacaacgtcgtcaagtgccgcaaatcagatc
ccaggcttggtcctatcagggatgccggcatccttgagcagtatgaccgggtttttgagc
ggatctaacccagcaccttatgcgcaagcggctgccgcaggagctgtgggcagtggactc
tcagcgaccattggaacaaatgttagtagtactaactccagtggagttgtaacctcagtg
gggactaatggaagcttgggctccacaagcctcttggactccacaagcctcttgggctca
gggtctggtgttttgggtcttgggtcgatgcagtccgcagtggagcctttgcccctggtg
gctcccagccctgtgggaggaggactgtcctcaggtagcagtgtgggagttattggaagc
aatgcagggacttctgggacaggaagtgcaacagctgtgggaagtgctgtgttaccacga
ccgcctagtgcaccgaaacaaaatggtggtacaagttatagtgctgtggtagcagacagc
atgtcagactccgccctcaacagtgccagccaatcacagaacagccaatcctcatcctta
aattccataacaaatcagcttaaggacagtggttccagccttctggggtcaatgacactg
ccgcccagcttgccgtcgtacagtgagagtaaaccgggtgctggcagcctgctgaatggt
cctcactcctacacacaggctgccgacaccatcaagcctcaggagcctctgagttctctc
aaatcgatggcagagcgggttgcccaggggtcaggtttagaaggagagctgtctgcacta
catatcactactgatatattccccagctccacggctccttcaggccctccagcagctcct
cagccagcacagtcagaggtgaacatccccccatcattaggtgtgtgtccgctggggccc
gcccctctctccaaagagcagctctaccagcaagccatgcaggagtccgcctggacacac
atgcctcacccgtccgactctgagagaatcaggcagtacctgatgaggaacccatgccca
acactgccttttcaccaccaggtgccacctccccactctgacactgtggagttctaccag
agactgtccacagagaccctcttcttcattttttactacttagagggtacaaaagcgcag
tatctagcagccaaggccttgaaaaagcagtcgtggagattccacacaaaatacatgatg
tggttccagaggcatgaggagcccaagaccatcactgatgagtttgagcaagggacatac
atttactttgactatgagaaatggggccagaggaaaaaggaaggatttacatttgagtac
aggtatcttgaggaccgagaccttcagtga
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