Myxocyprinus asiaticus (Chinese sucker): 127425464
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Entry
127425464 CDS
T08782
Name
(RefSeq) general transcription factor IIH subunit 4-like isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03022
Basal transcription factors
masi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127425464
09124 Replication and repair
03420 Nucleotide excision repair
127425464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
masi03021
]
127425464
03400 DNA repair and recombination proteins [BR:
masi03400
]
127425464
Transcription machinery [BR:
masi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
127425464
DNA repair and recombination proteins [BR:
masi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
127425464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
127425464
NCBI-ProteinID:
XP_051527453
LinkDB
All DBs
Position
34:complement(12628504..12645266)
Genome browser
AA seq
472 aa
AA seq
DB search
MSQINNQMKLRVQLQCKNLHEYLRELSPEILDRLYNHPATCLAVYRELPGLAKNYVMRML
FLDHPLPQAVVALWVKKDSQNAHDQCVSVLTGLRLWHSQQLQGGLQGFVLNPVFKDNLRI
ALLGGGKPWADEGSCLGPDRHARDVESLDRYAMERWEVILHFMVGSPSAAVSQDLAQLLI
KAGLMRSEAGEAPYITSAGFQFLLLDTASQLWYFTLQYLNTAQSRGMDLVEILSFLFQLS
FSTLGRDYSVEGMSESLLTFLQHLREFGLVFQRKRKSRRYYPTRLAITLAAGVTVNPASS
SASTLGATLRTGDTGFIVVETNYRIYACTNSELQIALVALFSEMLYRFPNVVVAQVTRES
VQQAIANGITAQQIIHFLRTRAHPVMLKQTPVLPPAITDQIRLWELEKDRLQFTEGVLYN
QFLSQADFEVLRDRAQGLGVLVWQNPAHRVMVVSPHGHSEVKRFWKRQKSHM
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagatcaataatcagatgaagcttcgagtgcagctgcagtgtaagaacttacat
gagtacctgagggaactgagtccagagatcctcgacagactctacaatcatcccgcaaca
tgtctggccgtctacagggaacttccaggattggcaaagaattatgtaatgcggatgctg
tttttagaccaccctcttccacaggccgtggtcgcactgtgggttaagaaagacagtcaa
aatgcccatgatcagtgtgtgtctgtgttaactggcctacggctgtggcacagtcagcag
cttcagggtggactccaaggctttgtgcttaaccctgtgtttaaagataacctgaggata
gcactgctgggcgggggtaaaccgtgggcagatgagggcagctgtctgggtcctgatcgc
catgcaagggatgtagagagtctcgaccgctatgcaatggagcgatgggaggtcatcctt
cacttcatggtgggctcacccagcgctgctgtcagccaggatctggcacagctcctcata
aaggctgggctcatgaggagtgaggctggtgaagctccttatatcacttcagcagggttt
cagtttctgctactagacacggcatctcagctgtggtacttcactctgcagtacctcaac
acagcacaatcaagaggtatggacctggtggagattctttcctttttgttccagttgagt
ttttccactcttggtagggattattctgtggagggaatgagtgagtctctactcacattt
ttgcagcatctgcgagagtttggcctggttttccaaagaaagaggaagtcaagacggtac
tacccaacaaggttggccataactcttgctgcgggcgtcacagtaaaccctgcctctagc
tctgcctctacactgggagccacactcagaacaggagacacaggcttcatcgtggtagaa
accaactatcgcatctatgcgtgcacaaactctgagctacagattgcactggtagctcta
tttagtgagatgctgtatcggtttcctaatgtggtggttgctcaggtaacaagagagtct
gtgcagcaggcaattgctaatggcattactgcacagcagataattcactttttaaggacc
cgagcacatccagtaatgcttaaacagacccccgtcctccccccggccatcacagatcag
atcagactgtgggagctggagaaagatcgcttgcagttcactgagggagtattatacaac
cagtttttatcccaggctgattttgaagtgctacgggatagggctcaaggtttaggtgta
ttggtgtggcagaaccccgctcacagggtcatggtggtatcgccacatggacacagcgag
gtcaagagattctggaaaagacagaagagtcatatgtaa
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