KEGG   Myxocyprinus asiaticus (Chinese sucker): 127425926
Entry
127425926         CDS       T08782                                 
Name
(RefSeq) collagen alpha-1(VI) chain-like
  KO
K06238  collagen type VI alpha
Organism
masi  Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04510  Focal adhesion
masi04512  ECM-receptor interaction
masi04518  Integrin signaling
masi04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:masi00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    127425926
   04518 Integrin signaling
    127425926
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    127425926
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    127425926
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:masi04147]
    127425926
   00536 Glycosaminoglycan binding proteins [BR:masi00536]
    127425926
Exosome [BR:masi04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   127425926
Glycosaminoglycan binding proteins [BR:masi00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   127425926
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   127425926
SSDB
Motif
Pfam: VWA Collagen VWA_2 VWA_3 VWA_CoxE
Other DBs
NCBI-GeneID: 127425926
NCBI-ProteinID: XP_051528209
LinkDB
Position
35:611764..673424
AA seq 1005 aa
MALNGLILSAVLCALWAAIFAQDASRPSFRECPVDLFFVLDTSESVALRAKPPEFFINQI
KTFTKLFIDELKDMRQPCDRDVTWNSGALHYSDDTELVMGLVDLNTKRAELKSAIDRIKY
IGKGTYTDCAIKEGISELLRAGSHYHENKYIVVVTDGHPLTGYKEPCGGIQEATNEARQH
AIKVFSVAISPDQEDTRLSVIATDQNYRQNFTAADKSRSTQMSTIRTIVNMITNETKDVC
CSFDCNAPGGPVGPRGDPGNRGETGRPGMPGEKGDVGAQGNAGDPGPVGYQGMKGDQGIR
GEKGERGNRGFKGDKGEGGLDGIDGRKGEPGFAGLPGCKGSPGPDGLQGEPGPKGDPGQY
GRKGERGDPGKDGEPGRPGNYGPSGGKGDRGPRGANGDKGERGDDGQPGPDGPPGDRGTA
GEKGEQGSRGNRGPKGEPGEPGPRGEQGREGSTGPNGEPGEPGRLGAPGYRGDEGFTGPE
GPKGPRGIKGAPGDRGLMGERGTDGPPGNGTEGCHGFQGYPGPRGDTGVPGGKGTPGPKG
DDGEPGDPGLDNNSPGPPGAKGAKGHRGPEGRPGTPGPPGPAGADECEILDIIMKMCSCC
ECKCGPLDIAFIVDSSESIGASNFAIAKDFIVTVMDRLKLRQFGANESRIGVVQYSGASA
QEVVQLGDPNIKTLTDLKQAVKELRWLAEATYTGEALQYSLRNMIGKLVTERSVVIVLTD
GRSDTRRDKVPLNVLCGKGLKVGGVGVSDYAERRPNQEQLDDVVCKDDPREGFSFVLNNF
GLLLDDSFLQNLTERICEDKKCPTYTCPIKFSDNTDVLIMMDSSASVGSKNFQMTKDFAQ
ILAKRFLSAERQGFQVRIGVGQYSNNANMEAEFSSNTTQVLAQIAEAKFQNAGTQVTNAL
TFAIERFRGGRNRKKKLLVFSDGRSQGVNTVQIEKAVEQLNSAGIELYILAVGNQVNEAH
LRTLVSRGRPYDNTYAYRHLFKAPDYRSMVTGVFYQTISRKISLD
NT seq 3018 nt   +upstreamnt  +downstreamnt
atggcgctcaatggacttatattatccgctgttctgtgcgcactttgggcagcgatcttc
gctcaggatgcgtctcgaccgtcctttagagaatgtccggtggatttgttcttcgtgttg
gacacctctgaaagtgttgctctcagggccaaaccaccagagtttttcatcaaccaaatc
aagaccttcactaaacttttcattgatgaactgaaagacatgcgtcagccgtgtgaccgt
gatgtgacatggaactctggagcccttcattacagtgacgacactgagctggtgatggga
ctggttgacctgaacacaaagcgtgctgaactgaagtctgccattgacagaatcaaatac
attggcaagggaacgtacactgactgtgccatcaaggagggcatctctgaactgctcaga
gcgggttcccactatcatgagaataagtacattgtggtggtgacggacgggcaccctttg
accgggtacaaggagccatgtggtggaatccaggaggccacgaatgaggctcgacagcac
gccatcaaagtgttttccgtggccatctcacctgatcaggaggacaccagactgtctgtc
attgccacagaccaaaactacagacagaacttcaccgctgcagacaaatcccgctccaca
caaatgagcactatacgcaccatcgtcaacatgattacaaatgaaacaaaggatgtgtgc
tgctcctttgactgcaatgccccaggaggccccgtgggaccccgcggagacccaggaaac
agaggagagactggaagaccaggaatgccgggagagaaaggagatgttggtgctcaggga
aatgctggtgatcccggtccagtcggttatcaaggaatgaagggagaccaaggaataaga
ggcgagaagggagaaagaggtaatagaggcttcaagggagacaaaggagaaggggggctt
gatggcatcgatggacgtaagggtgagcccgggtttgctggtcttccaggctgcaaaggg
tcaccggggccagatggcttgcagggagaaccaggtccaaaaggtgaccccggtcaatat
ggacgcaaaggagagagaggagatcctggaaaagatggcgaaccgggaagacctggtaac
tatggaccctcagggggcaagggagatcgtggtcctcgtggtgccaatggtgataagggc
gagagaggagatgacgggcaaccagggccagatgggccaccaggagacagaggcacagct
ggtgagaagggtgaacaaggttctcgtggtaacagagggcccaaaggtgaacctggtgag
cccgggccccggggagaacagggacgtgagggatcaacggggccaaatggagaaccgggt
gagccaggaagactcggcgcacctggttaccgtggtgatgagggttttaccgggccagag
ggaccaaaagggcccagaggaatcaaaggggctccaggagacagaggcctgatgggagag
aggggtacagatggaccaccaggaaatggaactgagggttgccatggtttccagggttat
cctggacccaggggagacacaggagtacctggtggaaaaggaactcctggacccaaggga
gatgatggagagccaggtgaccctggattagataacaacagtccaggaccacctggagct
aaaggagccaaagggcacagaggacctgaaggaagacctggaacaccaggacctcccggg
cctgcaggagcagatgaatgtgagattctggatatcattatgaagatgtgctcttgttgt
gaatgcaagtgtggtcccctggacatcgcgtttatcgtggacagctctgagagtatcggg
gcttctaactttgccatcgcgaaagacttcattgtaactgtaatggaccggctcaagtta
cgacagtttggtgccaatgagtctcgtattggcgtggtgcagtacagtggtgccagtgct
caggaggtcgtacagcttggcgaccctaacattaagaccctgacggacctaaaacaagct
gtgaaagagttgcgctggctagctgaagctacatacactggagaagctctgcagtactcg
ctaagaaacatgattggcaagcttgtgacggagaggagcgtggtcattgtgctcactgat
ggacgctcagacaccaggagagacaaagtgcctctaaacgtgttgtgtggcaaaggacta
aaggttggcggtgttggcgtgagtgattacgcagagaggcggcccaatcaagaacagctg
gatgatgtagtttgtaaagatgatcccagagagggcttctcctttgtcctaaacaacttt
ggcctgcttctggatgacagcttcctgcaaaacctgactgagagaatctgcgaagacaag
aagtgccccacttatacttgtccaattaaattcagtgataacacagatgtcctcatcatg
atggacagttcagccagcgtgggctccaagaacttccagatgactaaggactttgcacag
attctggccaagcgcttcctgtcggcagaaaggcaagggtttcaggtgcggattggtgtc
ggccagtacagcaacaatgccaacatggaggcggaattctcctctaacaccacccaagtt
ctcgctcagatcgcagaggccaagtttcagaatgcaggtacgcaggtgacaaatgcgctc
accttcgccatcgagcgcttcaggggcggcagaaacaggaagaagaagctgctggtgttt
tccgatggtcgttcccaaggtgtcaacaccgtccagattgagaaggctgtggagcagctg
aacagcgctggcattgagctgtacattctggcagtcggaaatcaggtgaacgaggcacac
ctgcgcaccttggtgagccgcggccggccctacgacaacacgtacgcctaccgtcatctg
tttaaagcccctgactaccgctcgatggtcaccggcgtcttttaccaaactatctcccgc
aagatttccctggactga

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