Myxocyprinus asiaticus (Chinese sucker): 127426021
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Entry
127426021 CDS
T08782
Name
(RefSeq) protocadherin-20-like
KO
K16498
protocadherin delta 1
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
127426021
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
masi01009
]
127426021
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
masi04515
]
127426021
Protein phosphatases and associated proteins [BR:
masi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127426021
Cell adhesion molecules [BR:
masi04515
]
Cadherins
Protocadherins
127426021
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
FAM176
PepSY
Motif
Other DBs
NCBI-GeneID:
127426021
NCBI-ProteinID:
XP_051528410
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Position
35:complement(39897898..39903325)
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AA seq
880 aa
AA seq
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MCNTKRTTCLYSKRELWGWFILLLFTSPLTCSSNFSHLIYKIKEGLPKGTLIGAIGVDLN
LDLTVEPPRSFNLELKTASQQYVNLNNTTGELFTSAVEIDREALCSHEGQGCEIFLDVLI
LPQQYFQLVKIRIVIEDVNDNRPHFPIDEIRLSVPENAPVNARFAVELSAVDPDIGIYGI
QTYWLVNDYGVFTLDIEENEGGELTPFLIITESLDRETQAEYVTDIIAEDGGSPPLLGTA
TLRIIITDVNDNCPKFTESQVNITLYGNATKGTQLARLQAYDLDEGANALITYTFSERVN
QESRNLFNLDRITGVIKLAGKIDNNTGKLYKLIVLANGPTCIPEIAAVSVHVIKELSGPP
VVIPRYIASEKDGVVNLSELEPPFSPIAFFTIKNTDPRQEVECCLEGTGPFRLVPYEHVK
NEYLLETTELLDYELQQDYEIIVVVRNSHGIVVKTVVKVHVLDVNDNAPVFKQSLIDITV
EENNPPNTFLTQLQATDADSDIRGEVYYLLGADAPTIFHLGRLTGVLTVCTSLDREEKET
YRFMVRALDCGTPRKESVATMIITVQDRNDNSPRFINKDFTFFVPENFPGFREIGVLTVT
DADAGQNGWVALSILNGSDIFVIDTGRGALRAKTPLDREQQGTYYVWIEAIDGGEPALSC
VTMVTVLLLDVNDNPPTVLFPQSNQSYMLVLPSTLPGTSITEVYAVDRDTGMNAVIAYSI
VKRTDGEPGSFDIDPYTGNITLKKALSNRGLYSLWVKVRDHGQPELYSTVLVNLFVNETV
SNESLIQSMLPRGAEIEEEVPPVKKPREADRVPITCREYQVVLLALTATCLGLFVTVLSL
VTYICCKKMKKPKKKRLDVEIPLKLNLETLDKNSMEISNI
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaacactaaacggacaacctgcctttacagcaaacgagagctatggggttggttc
attctcctacttttcaccagccccctcacctgctcatcaaatttcagtcacctcatctat
aaaataaaagaaggcttacctaaagggacactcataggggctatcggtgtagatttaaac
ttggatctgacagtagagccccctcgttcattcaacctggaactaaagacggcaagccag
cagtatgtaaatttgaataacacaacaggggagcttttcacatctgccgtggagatcgac
agagaggctctatgttcccatgagggtcagggctgcgaaatcttcttggacgtgctgatc
cttccccaacagtactttcagttggttaagatcagaatcgtcattgaagatgttaacgac
aaccgtccacattttcccatagatgaaatcagactatctgtgccagagaatgcaccagtt
aatgccaggtttgccgtggagctgtccgcagttgatcctgacatcgggatttatggtatt
cagacatattggcttgttaatgactatggagttttcactctagacattgaggagaacgaa
gggggtgaactgacacccttcctcatcattacagagtctctcgatagagaaacgcaagct
gagtatgtgactgatatcatagcggaggacgggggctctccgccacttctaggcactgca
actctgaggattattataacggatgtcaatgacaactgccccaaattcacagagtcgcaa
gtaaacattacgctttatgggaatgctactaaaggcacccagctggctcgtctccaagcc
tatgatctagacgagggggccaacgccctgatcacgtataccttcagcgaacgggtcaac
caagaaagcaggaacctgtttaatttggatagaatcacaggggtcattaagctagcagga
aaaatagacaacaacaccggaaagctctacaagctaatcgtactcgccaatgggccgacg
tgtattccagaaattgcagccgtttctgttcatgttattaaagagttatctggcccaccg
gtagttattccacgctacattgcatcagaaaaggatggtgtcgtcaatctaagcgaatta
gagccaccattttcacccatagcattttttaccatcaaaaacactgacccacgacaggaa
gtagagtgttgtttagagggtactggtccattccggcttgtaccctatgagcatgtcaaa
aacgagtatcttcttgagaccactgaactactggattatgagctgcaacaggattacgaa
attattgtagtggttcgtaactctcatggaatagtagttaagaccgttgtgaaagtccat
gtattggacgttaatgacaacgctccagttttcaaacaatccctcatcgacattactgtg
gaggagaacaaccctccaaatacattcctcacccaacttcaggcgactgatgcggacagc
gacatcaggggcgaggtgtattacctactcggtgccgacgctcccaccattttccacctg
ggcaggttgaccggagtcttgactgtgtgcacctctctcgacagagaggaaaaggaaaca
tatcgattcatggtgcgagccttggactgtggaacgccaagaaaggagtcagtcgccacc
atgataatcacagtgcaggatcgtaatgacaacagtcctcgcttcatcaacaaggatttc
actttctttgttccagagaactttccaggtttcagggaaatcggggtgcttactgtcacg
gatgcagatgcagggcagaacggctgggtagctctgtccatcctcaatggtagtgacatc
tttgtgattgacacgggacgaggggcgttaagggcgaagacgcctctagacagggagcag
cagggaacgtactatgtctggattgaggccattgatggtggtgaacccgccctttcttgt
gtcactatggtaaccgttctcctcctggatgtcaatgataaccctccaactgttcttttc
ccccagtccaaccagtcttacatgctggttcttcccagcacgctcccaggaacatctata
acggaagtctatgccgtggaccgggacacgggaatgaacgctgttattgcttacagcatc
gtcaagagaacggatggagagccaggctcatttgacattgacccgtacactggaaacatc
accctgaagaaagccctgagcaacagaggcctctacagtctttgggtcaaagtcagggat
cacggtcaaccagagctgtactctacagtcctggtcaatctttttgtgaacgagacggtg
agcaatgagtccctcattcagagtatgttgcccagaggggcagaaattgaggaggaggtc
cctcctgtcaagaaacccagggaggctgatcgagtgccaattacatgcagagagtaccag
gtggtactgcttgctctgacagctacctgtctgggactgtttgtcacagtcttatcattg
gttacgtacatttgctgcaagaagatgaaaaagcctaaaaagaaacggttagacgttgag
attcctttaaaactgaaccttgaaacactggataagaattcaatggaaatttcaaacata
tga
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