Myxocyprinus asiaticus (Chinese sucker): 127426131
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Entry
127426131 CDS
T08782
Name
(RefSeq) harmonin-binding protein USHBP1 isoform X1
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
masi03037
]
127426131
Cilium and associated proteins [BR:
masi03037
]
Primary cilia and associated proteins
USH complex and associated proteins
127426131
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
CC149
Motif
Other DBs
NCBI-GeneID:
127426131
NCBI-ProteinID:
XP_051528643
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All DBs
Position
35:23217068..23244446
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AA seq
653 aa
AA seq
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MMEQRSDSLVSADSELAQCETEVSTLLQTISDLNKKMDSLQIPREMKTSETQAQASGYVR
QQGSSSPACSLTVVDAGTSSVETKTKRVCRDTKGGSSELWNELQKIISVLETSCGQGRKL
LWQTQNSERIQANHLSAATESWVQTTQVLDEMERDCGISYPSALPPEERRQYQQDLLSLY
NQKQDLSASLKSRQEELMSAERRLVEFEDEKKWLQEKLVDLKRKWLCGVSCSPPVSPSLS
SSRTSSPCFSSPPFPRSPLLPCKLPSFTPDSSPSPCTVDSVLQSEIEKLQRCLERLKARN
ERLNAALARRKGESEQLSMSLSRQEADSSALHMALTYCEECEEAYSDLLSLYKARKQQNA
EALIRPQPDLSKSTCENFKKEAPSSCTLEGTTEHRPNSLLQFEDKAGVILQRISRLKQDR
EAVCIPQQGKAGEGKISPDTGTLAGVRGRGGLLSKNTKEEKAALLYELVTVREEMSDLRG
DLRLLEKERRCLELALMVQSAQDSAGALILESLREELSERRAAQQRIAENRAKLENGGGI
PGPRNHSILRELQAALQREQSLKNRVTSLHESLDSALTDCTTQRRINREETSRLSHYFNK
VSHTYRSSRKKHQEQLWRLEKQITVISEHHASQEAELSATLEAMEWKREETVL
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgatggagcagagatcagacagtctggtgtcggctgactctgaactggcgcagtgtgaa
acggaggtgagcacattactgcagaccatctctgacctcaacaagaagatggactcccta
caaataccacgagaaatgaaaacatcagaaactcaagcccaggccagtgggtacgttcgg
caacagggttcgagctctccagcatgtagcctcacagtggtggatgctggcacatcatct
gtggagaccaagaccaagagagtctgcagggacactaaagggggcagtagtgagctttgg
aatgaactacagaagattatctctgttcttgagacctcatgtggtcaagggaggaaactg
ctctggcaaactcagaattctgagagaatccaagccaatcatctttctgcagcgacggag
agctgggttcagaccacacaggtgctggacgagatggagagggattgtgggatctcgtac
ccctctgctctgcctcctgaggagagacgtcagtaccagcaggatttgctctcgctgtac
aatcagaagcaagatctcagcgcctcattaaagagccgacaggaagagcttatgagtgct
gaaagaaggctagtggagtttgaggacgagaagaagtggctgcaggaaaagttagtggac
ctgaagaggaaatggctatgtggagtgagttgttctcctcctgttagcccatcattgtcc
tccagtcgaacctcaagcccgtgcttttcctcgcctccgtttcccagatctcctttgctg
ccctgcaagctgcccagcttcaccccggactcctctccgtctccctgcaccgttgattca
gtgctgcagtccgagattgaaaaactgcaaaggtgtctggagcgtctgaaagctcgtaat
gagcgtctgaacgcggctctggccaggaggaaaggagaatcggagcagctgagcatgagt
ctcagccggcaggaggcagacagctcggctctacacatggctctcacatactgtgaggag
tgtgaggaggcttacagtgacctgctgtccctgtacaaggccagaaaacaacagaacgca
gaagcattaatcagacctcagcctgacctctcaaagtcaacttgtgagaactttaaaaag
gaagcgccgtcctcctgtacactagagggcactactgagcacagaccaaacagcttactc
cagtttgaggataaggcaggtgtaattctgcagaggatctcccggctgaagcaggacagg
gaggctgtgtgtatcccgcagcagggcaaagctggcgagggcaagatcagtcctgacact
ggcacacttgcaggtgtcagaggtcgtggtggtttactatccaaaaacaccaaagaggag
aaagcagctctactgtatgagctggtgacagtcagggaggagatgtcagacttgcgaggg
gacctcagactccttgagaaagagaggcggtgtttggagctggcactgatggtccagagt
gctcaggattcagcaggcgcccttatcttggagagtctgcgagaggaactgagtgagagg
agagccgcccagcagaggattgctgagaaccgagcaaaactggagaatggaggagggatt
cctggccctcggaatcactctatcctgagagaactccaagcagccctgcaaagggagcag
tctttgaagaatagagtgacatctttacacgagtcattggactcagcgcttacagactgc
accacccagagaaggatcaacagagaggagaccagccgcctctcccactacttcaataaa
gtctcacacacctacagaagttctcgtaagaagcaccaggagcagctgtggcgactggag
aagcaaatcacagtcataagtgaacatcacgctagccaagaagctgagctgagtgccaca
ctggaggctatggagtggaagagagaggaaactgtactctag
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