Myxocyprinus asiaticus (Chinese sucker): 127426319
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Entry
127426319 CDS
T08782
Name
(RefSeq) ATP-dependent RNA helicase DDX19B-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03013
Nucleocytoplasmic transport
masi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127426319
03015 mRNA surveillance pathway
127426319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127426319
Enzymes [BR:
masi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127426319
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
127426319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
127426319
NCBI-ProteinID:
XP_051529024
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All DBs
Position
35:complement(20542174..20556802)
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AA seq
479 aa
AA seq
DB search
MATDSWAQAVDEQEAAAESIGNLQINEKEDQPKAEANGAKTEGNEEKTDDNDKEDKAAQS
LLNKLIRSNLVNTTNQVEVLQRDPNSPLYSVKSFEELRLKPPLLQGVYAMGFNRPSKIQE
TALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPDKKWPQCLCVSPTYELALQTGK
VIEQMGKFYPEVQLMYAIRGNKLERGIKLKEQIVIGTPGTVLDWCQKLRFIDPKEIKVFV
LDEADVMIATQGHQDQSIRIQRMLPKTCQMLLFSATFEDTVWNFAKRIVPDPNIIKLKRE
EETLDTIKQYYVICNSKEEKFQALCNIYGAITIAQAMIFCHTRKTAGWLAGELSKEGHQV
ALLSGEMQVEQRAAVIERFRNGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN
ETYLHRIGRTGRFGKRGLAINMVDSRLSMNILNRIQEHFNKKIEKLDTDDLDEIEKIAN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccgattcctgggcccaggctgttgacgaacaagaagccgcagcggaatcgata
ggcaacctgcaaataaatgagaaggaagatcagccaaaagcagaggcaaatggggcaaag
acagaaggaaatgaagagaagactgatgataatgataaagaggacaaggcagcacagtca
ctgttgaataaacttatacgcagcaatctagtgaatacgacgaatcaagtggaagtcctt
cagagggatccaaattctcctctctactcagtcaagtcgtttgaagagctacgattgaaa
cctccgctactacaaggagtgtatgccatgggattcaacaggccctctaaaatccaggag
acggccttgcccatgatgcttgcagaacccccacagaatctcatcgcccagtctcagtca
ggcacgggtaaaaccgctgcctttgtcctggcaatgttaagtcatgtggaccctgacaaa
aaatggcctcagtgtctgtgtgtgtccccaacgtatgagctggccctacagacaggcaaa
gtcattgagcaaatggggaaattttaccctgaagtccaacttatgtatgctatccgagga
aacaaactggagcggggaattaagctgaaagaacagattgtgattggcactcctggtact
gttctggattggtgtcaaaagcttaggtttattgaccccaaggagatcaaagtgttcgtc
ctggatgaggctgacgtcatgatcgccacgcagggtcatcaagaccagagcatacgcatc
cagaggatgcttcctaaaacttgccagatgctcctgttctcagccacatttgaggacaca
gtgtggaactttgccaagaggattgttccagaccctaacatcattaaacttaagcgagag
gaggagactctggacaccattaagcagtactatgtcatatgtaacagcaaggaagagaag
ttccaggctttgtgcaacatctatggagccattactatcgcacaggccatgatcttctgc
cataccaggaaaactgctgggtggctggcaggagagctttcaaaagagggccaccaggtg
gctctactgagtggagagatgcaggtggaacagagggcagcagtcatcgaacgtttccgt
aatggcaaggaaaaagtccttgttactactaacgtctgtgccagagggattgacgtggag
caagtttctgtggttatcaactttgatctgccagtggacaaggatggcaaccctgacaac
gagacatatttgcatagaatcggacgtactggacgatttggaaagagggggttggcaatc
aacatggtggacagcaggcttagtatgaacatccttaatcgcatccaggagcacttcaat
aagaaaattgagaagctggacacggatgatttggatgaaattgagaaaatcgccaactaa
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