Myxocyprinus asiaticus (Chinese sucker): 127426504
Help
Entry
127426504 CDS
T08782
Name
(RefSeq) eukaryotic initiation factor 4A-III-like
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03013
Nucleocytoplasmic transport
masi03015
mRNA surveillance pathway
masi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127426504
09122 Translation
03013 Nucleocytoplasmic transport
127426504
03015 mRNA surveillance pathway
127426504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127426504
03041 Spliceosome [BR:
masi03041
]
127426504
03009 Ribosome biogenesis [BR:
masi03009
]
127426504
03012 Translation factors [BR:
masi03012
]
127426504
Enzymes [BR:
masi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127426504
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127426504
mRNA cycle factors
Stress granule specific factors
127426504
Spliceosome [BR:
masi03041
]
Complex C
Other components
EJC/TREX
127426504
Ribosome biogenesis [BR:
masi03009
]
Eukaryotic type
90S particles
Helicases
127426504
Translation factors [BR:
masi03012
]
Eukaryotic type
Initiation factors
eIF-4
127426504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
AAA_30
TniB
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
127426504
NCBI-ProteinID:
XP_051529323
LinkDB
All DBs
Position
35:complement(41559705..41571679)
Genome browser
AA seq
406 aa
AA seq
DB search
MTAAAAPVRKRLLKEEDMTKIEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQ
QRAIKQIIKGRDVIAQSQSGTGKTATFCISVLQCLDIQVRETQALILAPTRELAGQIQKV
LLALGDYMNVQCHTCIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLV
LDEADEMLNKGFKEQIYDVYRYLPPATQVCLISATLPHEILEMTNKFMTDPIRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVS
SMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI
GRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgactgcagccgccgctcccgtgaggaagaggctcctgaaggaggaagacatgacgaag
atcgagtttgagacgagtgaggaggtggatgtgacgccgacgtttgacacgatgggcttg
agggaagatctgctgcgcgggatatacgcctacggttttgagaaaccatcagcgattcag
cagagagccattaaacagatcatcaagggacgagacgtcatcgcacagtctcagtctggt
actggtaaaacagccacattctgtatctcagtgctgcagtgtttggatattcaggttcga
gagactcaagcactgattttggcgccaaccagagagttagcaggacaaatccagaaggtg
ctgctggcgttgggtgactacatgaacgtgcaatgtcacacctgtattggtggcacaaac
gtgggagaagacatcaggaagctggattacggtcagcatgtggtggctggaacgcccgga
agagtgttcgacatgatccgcagaaggagtttgagaactcgtgccattaagatgctggtg
ttggatgaagcggatgaaatgctcaataagggttttaaggagcagatttatgatgtgtac
cgatatctgccgcccgccacacaggtgtgtctcatcagtgctacgctcccacacgagatc
ctggagatgaccaacaaattcatgaccgacccgatccggattctggtcaaacgtgatgag
ttgacactggagggtatcaaacagtttttcgtggctgttgaacgagaggagtggaagttt
gacactctgtgtgacctgtacgacacgctcaccatcacacaagccgttatcttctgcaac
accaaacgcaaggtggactggctgacagagaagatgagagaagcaaacttcactgtgtca
tcaatgcacggagacatgccacagaaagagagagaatccatcatgaaagagttcagatct
ggagccagtcgagtgttgatctccacagacgtgtgggccagaggtctggatgttcctcaa
gtttctctaatcatcaactatgatctgcccaacaacagagagttgtacatccacaggatt
ggtcgatcaggtcgttatggcaggaagggtgtggccatcaactttgtgaagaatgatgac
attcgtattctgcgtgatattgagcaatactattccacacagattgatgaaatgcccatg
aacgtggctgacctgatttga
DBGET
integrated database retrieval system
