KEGG   Myxocyprinus asiaticus (Chinese sucker): 127426721
Entry
127426721         CDS       T08782                                 
Name
(RefSeq) DNA repair endonuclease XPF
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
masi  Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03420  Nucleotide excision repair
masi03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:masi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    127426721
   03460 Fanconi anemia pathway
    127426721
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:masi03032]
    127426721
   03400 DNA repair and recombination proteins [BR:masi03400]
    127426721
DNA replication proteins [BR:masi03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    127426721
DNA repair and recombination proteins [BR:masi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     127426721
SSDB
Motif
Pfam: ERCC4 AmiA-like
Other DBs
NCBI-GeneID: 127426721
NCBI-ProteinID: XP_051529652
LinkDB
Position
36:23372710..23382428
AA seq 894 aa
MASPLLEYETEMFLNLFSTDGLLITAEGLGIDRILLHFMRMYSEEGSLVLLLNTTTPEQE
YFTEQLRAEGVSHLPQTVTSDVQSGDRYNVYTKGGVLFVTSRILVVDFLTDRIPAHLITG
ILVYRAHKIIESCQEAFILRLYRQKNKTGFIKAFTDKATSFSSGFCQVERVMRNLFVKKL
FLWPRFQASVNTTLDRHRPDVVELHVSLTPAMTAIQSSILDIMNACLKELKRYNPTLEAE
DLSLENALGTSFDKTIRHYLDPLWHQLGSRTKSLVHDLKILRTLLLYLTQYDCVTFLNLL
ESLRTSQKSFGSNSGWLFLDSSTSMFVNARSRVYCIQESKKKLKNGEVDQKQSAIATLKR
ELVLEKNPKWEALTEVLQEIEKENSSSEHEPGRVLICASDDRTCAQLKEYIHKGADHLLN
RLYSRTIGKDDTQTDLLKTAKGWPRKSSGKMNKGKNGQPKRAKANSKKPTKIEKQLRVSQ
MERQKEGAENDLIVNSEDEEGLAEVVEEEEEEEEILLGLSSDDYYGILKEPLTVIHPLNG
CSDPYSLTRVLHEVDPMFVVLYDAELSFVRQLEIYKASRPGKPLRVYFLIYGGSTEEQRY
LTVLSKEKKAFEHLIREKASMVVPEEREGREDTNLDLARSQEPASADTRKAGGREDVKES
HRIIVDMREFRSELPSLLHRRGLDIEPVTLEVGDYILTSEICVERKSVSDLIGSLQSGRL
YTQCLAMTRFYRRPVLLIEFDPAKPFSLVARSDFHQEISASDVTSKLTLLTLHFPRLRLL
WCPSPHVTAELFQELKHGRPEPDASAAQAVTVESETVTESADLYNPGPYDFLLRMPGVNV
KNFKSLIKHASCLADLVTFSQEKLSEILGSSSNARQLYEFLHNTMDVAPIQKNK
NT seq 2685 nt   +upstreamnt  +downstreamnt
atggcaagtccgctgctcgagtacgagacggagatgtttctgaatttgttcagcacggac
gggttgctgatcacagcagaaggactcggtattgaccggatcctgttacacttcatgaga
atgtattcagaggagggcagtctggtgctgttgttgaacacaacaactccagaacaggag
tattttacagagcagctgcgtgctgaaggggtgagccatcttccccagactgtgaccagc
gatgtacaaagcggtgacaggtataatgtgtacactaaaggaggagttctctttgtgaca
agccgcatcctggtggtggacttccttacagacagaattcctgcgcaccttataacagga
atccttgtgtatcgtgcccacaaaatcattgagtcttgtcaggaggctttcattttgagg
ctttatcggcaaaaaaataagactgggttcatcaaggcctttacagacaaagccacatcc
ttctcctctggcttctgtcaagttgagcgtgtcatgagaaacctgtttgtgaagaagctc
tttctctggccaagattccaggcatcagtaaacacaactctggacaggcatagacctgat
gtggtggagctgcatgtgtctctgactccagcgatgacagccattcagagctctattctg
gacatcatgaatgcctgtttgaaggagctgaagcgctacaatcccacactggaagcagaa
gacctctctctggagaatgccctgggcacttcctttgataaaacaatccgacattacctt
gacccattgtggcatcagcttggatccaggaccaaatctctagttcatgacctgaagatt
ttaagaacccttcttctctacctcactcagtatgactgtgtcaccttcctcaatctgctg
gagtctttgagaaccagccagaaaagctttggtagtaattcaggctggttgttcctggac
tcaagcacatcgatgtttgtgaatgctcgcagccgtgtgtattgcattcaagagtcaaag
aagaaattgaaaaatggagaggttgaccaaaagcaaagtgctatagccactctaaaacga
gaacttgtgcttgagaaaaatccaaagtgggaagctctaactgaggtgctacaggagatt
gagaaagagaatagcagctctgagcatgaaccaggccgtgtgttgatatgcgccagtgat
gacagaacctgtgctcagctgaaggaatatatccataaaggcgcagaccacctactaaat
cgtctttactcacgcacaattggaaaagatgacacccagactgatctactgaagactgcg
aaaggctggcccaggaagagctctggtaaaatgaacaaagggaagaatgggcagccaaaa
agagccaaagccaactcaaagaaacccacaaagatcgagaaacaattgagagtctctcag
atggaaagacagaaggaaggagctgagaatgacctgattgtgaacagtgaagatgaagaa
ggcctggctgaagtggtggaggaggaagaggaggaagaagagattcttctcggtctgtct
tcagatgattactatggtattctgaaggagccactgactgttattcacccactgaatgga
tgcagtgacccctacagtttgacacgggtgttgcacgaggttgaccccatgtttgttgtc
ttgtatgatgctgaactcagttttgtccggcaactggaaatttataaagccagcaggcca
ggaaaacctctccgtgtgtattttcttatatatggaggctcaacagaagagcagaggtat
cttacagtcttgagcaaagaaaaaaaagcatttgagcacctcataagggaaaaggctagt
atggttgtgccagaagagagagaaggtagagaggacaccaacctagatcttgcccgcagt
caggagcctgccagtgccgacacccgcaaagcaggtggtcgcgaagatgttaaagagtct
catcggatcatagttgacatgagggagttccgcagtgagctcccttccctcctgcatcga
cggggtctggacattgaacctgtgactcttgaggtcggcgactacatactgacatctgag
atctgcgtagagcgcaaaagtgtcagcgacctcattggttccctgcagagtggccgtctg
tacacacagtgcctcgctatgactcgattctatcgccgccctgtgctgctcattgagttt
gacccagcaaagcctttctccctggtggcccgcagtgacttccatcaggagatctccgcc
agtgacgtcacatccaaactgaccctccttaccctccattttccccggctgaggctgctc
tggtgcccatctccccatgtaaccgcagagctgtttcaggagctcaaacacggccgtcca
gagccagatgcttctgcggctcaggccgttacggtggagtcagagactgtgacggagtcg
gcagacctgtacaaccccgggccttacgactttttgcttcgtatgcctggagtcaatgtg
aagaacttcaagagcctcataaaacatgcttcctgtctggccgatcttgtgacatttagc
caagaaaagctaagtgagatattgggtagctccagtaatgctaggcaactgtatgaattc
cttcacaataccatggatgtagcgcctattcagaagaacaagtag

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