Myxocyprinus asiaticus (Chinese sucker): 127426865
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Entry
127426865 CDS
T08782
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127426865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
masi03041
]
127426865
Spliceosome [BR:
masi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
127426865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_EML
WDR90_beta-prop_4th
PRP4
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_Vps41
WD_LRWD1
WD40_like
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
127426865
NCBI-ProteinID:
XP_051529891
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Position
3:complement(52467599..52476622)
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AA seq
506 aa
AA seq
DB search
MSDEDEAPVVKKARIFYGSLEEKEKERLSREGTSTTVRDAVKAGIEAGNINISSGESMEM
EERVSERQAEVLAEFERRKRARQITVSTDDAEVKACLRALGEPITLFGEGPAERRERLRN
VLSVIGPDALKKSKKDEKAKRSQDEYQQTWYHEGPSSLKEARLWLAKYSLPRAVQRLDAA
RAYREIPESTRTVRQQELHKTLRNLNNFCSQIGDDRPISYCQFSPNSKLLVTASWSGLCK
LWKVPDCTLVRTLRGHNTNVGAISFHPQATLTLEESDVSMASCAADGSVKLWSLDSDEPV
ADIEGHSMRVARVAWHPSGRFLGTTCYDNSWRLWDLEVQEEILHQEGHSKGVHDLHFHPD
GSLAGTGGLDSFARVWDLRTGRCVMFLEGHLKEIYSINFSPNGFHLATGSGDNTCKVWDL
RQRRCMYTIPAHQNLVSSVKFQPTDGHYLLSGAYDNTVKVWTHPGWSPLKTLAGHEGKVM
GLDLSPDGQLIATCSYDRTFKLWMSE
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatgaagacgaagcccccgttgtgaaaaaggccaggatcttctatggaagtctt
gaagaaaaggagaaggagcgtctcagccgtgaaggaacatccaccactgtcagagatgct
gttaaagctggaattgaagctgggaatattaatatctccagtggtgagtcaatggagatg
gaggaacgtgtgagtgagcgacaggctgaagttctggcagagtttgagcgcagaaagaga
gccagacaaatcaccgtctccactgatgatgctgaggtgaaggcctgcctccgagctctt
ggtgagccaatcacgctgtttggggaggggcctgccgagagacgggagagattgaggaat
gttctttcagtgattggtcctgatgccttgaagaaatcaaagaaagatgaaaaagcgaaa
cgcagtcaagatgagtatcagcagacgtggtaccatgaaggaccttcctctctaaaagag
gcacgcctttggttggcaaaatattcactgcccagagcagtgcaaaggttagatgctgca
agggcctatagagagattccagaatctacacgaacagttcgacagcaagagcttcacaaa
actcttcggaatctaaataacttctgcagtcagattggtgatgatcgtccaatatcctac
tgccagtttagtcctaactctaaactgctggtgactgcgtcttggagtggcttgtgtaaa
ttgtggaaagtcccagattgtacacttgttcgcacattaaggggtcacaataccaacgta
ggagcgattagctttcaccctcaagccacgctgacactggaggagtcggatgtcagcatg
gcctcctgtgctgctgatggatctgttaagctgtggagtttagacagtgatgagccagta
gcagacattgaagggcactccatgagggtggctcgggtcgcctggcacccatctgggcgt
tttttgggcacaacttgctatgataattcatggcgactctgggatcttgaggtccaagaa
gagattctgcatcaggagggtcacagtaaaggtgttcatgacctgcatttccatccagac
ggctcacttgcaggaactggcggtctggattcctttgcccgtgtctgggacctgcggact
ggtcgttgtgtcatgttcctggagggccatctgaaagagatttacagcatcaacttctca
ccaaacggctttcacttggcaacaggcagcggagataacacctgtaaagtgtgggacctg
cggcagaggaggtgtatgtatacaatccctgcccatcagaacctggtgtcttctgtgaag
tttcaacctacggatgggcattacttgctgagtggtgcttatgacaacactgtcaaagtg
tggactcatcctggctggtctcctctgaagactttggcagggcatgaggggaaagttatg
gggcttgacctctcacctgacggacagctcatcgcaacctgctcctatgaccgaaccttc
aaactctggatgtcagaatga
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integrated database retrieval system
