Myxocyprinus asiaticus (Chinese sucker): 127427312
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Entry
127427312 CDS
T08782
Name
(RefSeq) cholesterol transporter ABCA5-like isoform X1
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127427312
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
masi02000
]
127427312
Transporters [BR:
masi02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
127427312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
AAA_23
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
127427312
NCBI-ProteinID:
XP_051530801
LinkDB
All DBs
Position
36:complement(7713563..7748982)
Genome browser
AA seq
1676 aa
AA seq
DB search
MYFIPVSDPCASQLKHAGEMKQPVSRRDAGVWHQTKSLLYKNLLIKWRTKQQSLQELILP
LLLLSLLILISTLNPHVSYGSISTKELEYERDLSLKGLGYTPINNVTNHIMEEVARELPL
NNELRLEMFSTEEDLENASLYEPDGYVGVVFLDNMSYRLRFPYSQLPLPSDFTESITSCY
TNYVNCRAANYWYSGFIRLQSLIDAAIIQMQTKRPVWNELNVRAVMMGHPGSVEVQKFPH
ALISIYLVLAFTPFVSFLIVNVAAEKEQRLKDTMGMMGLYDSAFWLSWGLLYAALVTTMS
ILMAVIATCTPLFSNSNFFVIFLLIFLYGISSIFFSFMLTPLFKKPKFASTVGSMLTVVF
GCLSLFTVLMRDFPQSAVWLLCLLSPSAFSFGIAQVVYLEAQGHGAVFSSLGNGPHALYV
PMVMLFLDCILYLLLAIYLDQVLPGEFGTRRSVLYFLHPSYWSKRRKRYVEVSSIYEGEV
NGTPVSDESVEAVSPEFRGKEVIRICNIRKIYKEKDCTVEALRGLTFDIYEGQITALLGH
SGAGKSTLMNILCGICPPTEGAATIYGSPVAEIAEGAEMKQLVGICPQFNIIFDVLTVEE
HLRIFAAIKGILPSDIDSEVRKVLKDLDLEKIMDAQAKNLSGGQKRKLSVGIAILGDPNI
LLLDEPTAGMDPVSRHQVWSLLKSRRAGKVTVLSTHYMDEADILADRKAILSQGQLKCVG
SSLYLKTKCGVGYHLRMSVTEGCEVENITSLVKQLVPKAQLSRQQEAALTFTLPFKSMDT
FPGLFAELDCRPDLGIINYGVSMTTLEDVFLRLEAEAEVDQADYRVFNQEKVEEESDFSS
LDDTDQRLLMFSDSRQDAVTGRALWRQQFSMVAWLHMLNLQRERKPILYNVTLFLVFLSA
LLILSVATGNIQFHSPERLFLPIYLLRRNEAPHKYTTSLLVQNSTDSDLSGFIQNLASQD
IKVEMMKKPDYMSAAPVSAAINVTGSSKDLSYILAFNSTTVHSLPMAVNVLSNALLKGLN
GTGRIKTWTKPFEYQIPDKTSYALVYMEAVLLGMLAAGTPAYFAMDHTRDRELMCRSTLR
ISGLVPSAYWCGQAAIDVPFYYLILTCMTSTLFAFHSTNLLTSHNIMSVALCLIGFSPAM
VLFTYCVSFMFVRVQSNRDFFSVVSMMLCVVSASIVQLALVNENAGLARVLHNTLCFFSP
FYPLMGCLNCITTATFHHSTHEEEFLWTNLFISVVAPYIQCILLLFILRWLEIRYGGQTM
KNDQLCRISSNAKSKVQRNPEENLSDNEDVQVEKARVKEALTCQCCEEKPVVVVSDLRKQ
YKGKREGFALGKRRKVATKNISFCVRKGEVLGLLGPNGAGKSTIMHMLSGDTEPTAGQIL
MGDYGTDFQPVENPLEHVGYCPQVNPLWPRITLQEHLEIYAAIKGLNQCDIPNIIKRVVS
ALELKDHLYKQAKNLSAGLKRKLCFALSMLGNPQIVLLDEPSAGMDPKSKHRMWRAIRAA
FKNKQRGALLTTHYMEEAEAVCDRVAIMVSGQLRCIGSIQHLKGKFGRGYSLEINLREEL
MGLQQVALLHKEIIKIFPHAARQDSFATLMVYKIPMEDVKSLAKSFAQLESAKQNFNFEE
YNFSQSTLEQVFMEFAKEQENEEDEVGSLSTTFQWQRLRQDSSVTINHADSIVHQL
NT seq
5031 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcatacctgtgtctgatccatgtgccagtcagctgaagcatgctggagaaatg
aagcagcctgtaagtagaagagatgccggagtctggcatcagacgaagagcctgctctac
aaaaacctgctaatcaaatggaggaccaaacagcagagtctccaggagctaatcttaccg
ttgctcctcctgagtctcctcatcctcatcagcaccctcaacccacatgtctcttacggc
agtataagcaccaaggagctggagtatgaacgggacctgtcactcaaaggtctcggttac
acccccatcaacaatgtcaccaatcacatcatggaagaggtggcacgggaactgcccctg
aataatgagcttcgattggagatgttctccactgaagaagacctggagaacgccagtctg
tatgaacctgacggctatgtgggagtggtcttcttggataatatgtcataccgtttgcga
ttcccatacagtcagctccctctgcccagtgacttcacagaatccataacaagctgttac
acaaactatgtaaactgccgtgctgccaactactggtattctggattcatacggctgcag
tcccttatagatgctgccatcatacagatgcagaccaaacgtccggtgtggaacgaatta
aatgtgcgtgcagtgatgatgggtcatccaggttctgtggaagtccagaagttccctcac
gccctcatctccatctacctggtgctagcattcacgcccttcgtctccttcctcattgtc
aatgtggcagctgaaaaagagcagcgactcaaagacaccatgggcatgatgggattgtat
gactccgcgttctggctttcatgggggctcctctatgccgcactagttacgaccatgtcc
attctcatggctgttatagcaacctgcacccccctgttctccaacagcaacttttttgtc
atctttctcctcatcttcctgtatggaatatcctctatcttcttctccttcatgttgacc
cctctgtttaagaagcccaagtttgcgagtacggtgggctccatgttgacggtggtcttt
ggatgtctgtctctcttcactgtgctaatgagagattttccccagtctgctgtctggctc
ctctgtcttttgtctcccagcgctttctctttcggcattgcccaggtggtgtatcttgaa
gctcaaggacatggtgcagtgttctcctctcttggcaatggtcctcacgctctctatgtt
cctatggtcatgctgttcctggactgcattctctatctgcttttagccatttacttggat
caggtgctcccaggggagtttggcacgaggcgttctgttctgtacttcctgcacccatcc
tattggtcaaagaggaggaagcgctatgtggaggtgagctccatttacgagggggaggtt
aatggaactcctgtgtctgatgaatcggtggaggcggtttctccggagttcagaggcaaa
gaggtaatcaggatatgcaatatccgtaaaatctacaaagagaaagactgcacagtggag
gctttgagaggtttgacctttgacatctacgagggtcagatcacagccctcctgggtcac
agtggagccggaaaatccacactcatgaacatcctatgtggcatctgccctcctacagaa
ggagctgccaccatttatggctcccctgtggcggagatcgcagagggtgcagagatgaaa
cagctggttggtatatgcccacagttcaacattatctttgatgtgctcactgtagaggaa
cacctgaggatatttgctgccatcaaagggattctgccttctgatatcgatagtgaggtg
agaaaggttctaaaagatctagatttggaaaagatcatggatgcccaggcgaagaacctg
agtggaggccaaaagaggaagctctcagtgggcatagcaattctaggagacccaaatatc
cttcttctggatgagcctacagctggtatggacccagtatcacgccaccaggtttggtcc
ttactgaagagccgtagagcaggcaaagttactgtactcagcactcattacatggacgag
gcagatatacttgcagatcgtaaagccatcctctctcaaggacagctgaaatgtgttggc
tcctctttgtacttgaagaccaagtgtggggttggctaccatcttaggatgtcagtgact
gaaggctgtgaggtggagaacatcacatcgctggtcaagcagcttgttcccaaggcacag
ttgtcaaggcagcaagaggcagcgctcactttcacgttgcctttcaagagcatggacact
ttcccagggcttttcgcagagctggactgtcgtcctgacctgggtatcattaattatgga
gtctccatgacaacattagaggatgtattcttgcgtctggaggcagaagcagaggtggat
caggccgactacagagtgtttaaccaggagaaggtggaagaagaaagtgacttttcctct
ctggatgatacagatcaaaggctgttgatgttttcagacagcagacaggatgcagtaacc
ggacgtgccctctggaggcagcagttcagcatggtggcctggctgcacatgctcaacctg
cagagagaaaggaaacccatcttatacaatgtgacactgttcctggttttcttgtctgca
ctgctgattttgtctgtggcaacaggaaacattcagtttcactctcctgaaagactgttt
ttacccatatacctgctgcgccgcaatgaggctcctcacaaatacaccacaagcctgctt
gtgcaaaactccactgattcggatctgtcagggttcatccagaatctggcgtctcaggac
attaaggtggaaatgatgaagaagccagactacatgtctgctgcacctgtgagcgctgct
atcaatgtgacgggatccagtaaggatttgtcctacatcttggcatttaacagtaccaca
gtgcactccctgcccatggctgtcaatgtgctcagtaacgccctcctgaagggcttgaat
ggcacaggacgcattaaaacatggaccaaaccatttgagtatcaaatcccagataagaca
tcctacgctctggtttacatggaggctgtacttctggggatgctggctgctgggacgcca
gcatactttgccatggaccacacaagagacagagagctgatgtgtcgctcgactctaagg
atctctggtctggtcccatctgcgtactggtgtggtcaggcagccattgatgtccctttc
tattatctcatcttaacctgtatgaccagcaccctgttcgctttccactctacaaacctg
ctaacctcccataacatcatgtctgtggctctgtgtttgattggcttctctccagccatg
gttctcttcacctactgtgtgtccttcatgttcgtcagagtccagagtaaccgagacttt
ttctcagtggtctccatgatgctttgtgtggtttctgcatctatagtccagttggctctt
gtgaatgaaaacgctggtctggctcgtgtcctacacaatacactgtgttttttcagtccg
ttctaccctcttatgggctgccttaattgcattaccacggctaccttccatcattctact
catgaggaggagttcctgtggacgaatctcttcatctctgttgtggctccatatatccag
tgtatcctgctgctcttcatactgagatggttggagatcagatatggagggcagacaatg
aaaaatgaccagctctgcaggatttcctccaatgcaaagagcaaagtccagcggaaccca
gaggagaacttgagcgacaatgaggatgttcaggtggagaaagctcgagtgaaggaggca
ttgacctgtcagtgctgtgaggaaaaacccgtggtggtggtaagtgacctgaggaaacag
tacaaaggcaagagagaaggtttcgcacttggcaagagaagaaaagtggccactaagaac
atctccttctgtgttcgcaaaggtgaggttttgggtctgctgggaccaaatggagctgga
aagagcaccatcatgcacatgctgtcaggagacacagaacccactgctggacagatcctg
atgggagattacggcacagacttccagccagtggaaaaccccttggagcacgtagggtac
tgtcctcaggtgaaccctctgtggcctagaatcactttacaggagcaccttgagatctat
gctgccatcaaggggttaaatcaatgtgatatcccaaacatcattaagcgggttgtgagt
gctctggaactgaaggatcatctttataaacaggcaaaaaacctgtctgcagggctaaag
aggaagttgtgctttgcactaagcatgctgggaaatcctcagatagtattattggatgag
ccttctgcagggatggatcccaaatcgaagcatcgcatgtggagggcaatccgtgctgcc
tttaagaacaaacagcgaggggcccttttaaccacccactacatggaggaggcagaggct
gtgtgcgaccgtgtggccatcatggtttctggtcagctacggtgtattggttcaattcag
cacctgaagggaaagtttgggagaggctacagcctagaaattaatctccgggaggagctc
atgggtctccagcaggtggcgctattgcacaaagagattataaagatatttccccacgct
gctcgtcaggacagttttgcaaccctgatggtgtataaaatcccaatggaggacgtgaag
tcactagccaagtcctttgcccagctagagagtgctaaacaaaactttaattttgaagag
tacaacttctcccagtcaactcttgaacaggttttcatggagttcgcaaaagagcaggag
aatgaagaggatgaggtgggatctctcagcactactttccaatggcagagactgagacag
gacagctctgtaaccatcaatcatgctgacagcatagtacaccagctatga
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integrated database retrieval system
