Myxocyprinus asiaticus (Chinese sucker): 127427685
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Entry
127427685 CDS
T08782
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4 isoform X1
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03018
RNA degradation
masi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127427685
09123 Folding, sorting and degradation
03018 RNA degradation
127427685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127427685
03041 Spliceosome [BR:
masi03041
]
127427685
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127427685
mRNA degradation factors
5'-3' decay
Lsm complex
127427685
Spliceosome [BR:
masi03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
127427685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
127427685
NCBI-ProteinID:
XP_051531379
LinkDB
All DBs
Position
37:complement(23024491..23033366)
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AA seq
174 aa
AA seq
DB search
MNHDTKMATVAKQSKIKIKNWWFCNTNTYRRKKVINIWDGMKLVELKNGETYNGHLVSCD
NWMNINLREVICTSRDGDKFWRMPECYIRGSTIKYLRIPDEIIDMVKEEVLSKGRGRGGM
QQNKPQGKGRGGGGPGRGGGAGRGVFGGRGRGMPGTGRGQQQDKKPGKPQGVNH
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgaaccatgacacaaagatggccaccgtggctaaacaaagtaaaataaaaataaaaaac
tggtggttttgcaataccaatacatacagaagaaagaaagtcataaacatctgggatggc
atgaagctggtggagttgaagaatggtgagacatacaacggccatctggtcagctgtgac
aactggatgaacataaacttgagagaagttatttgcacctcacgggatggagataagttt
tggaggatgccggaatgctacatcagaggaagcaccattaaatacttacgaatccctgat
gagatcatagatatggtgaaagaggaagtgctctctaaggggcgtggcagaggtggcatg
cagcagaacaagccacagggaaagggcagaggaggtggaggacctggaagaggaggtgga
gctggaagaggtgtttttggtggccgtggaagaggtatgccgggaactggccgtggacag
caacaagacaaaaagcctggaaaaccacaaggtgtcaaccactaa
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