Myxocyprinus asiaticus (Chinese sucker): 127427806
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Entry
127427806 CDS
T08782
Name
(RefSeq) polypyrimidine tract-binding protein 1b isoform X1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127427806
03041 Spliceosome [BR:
masi03041
]
127427806
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
127427806
Spliceosome [BR:
masi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
127427806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
127427806
NCBI-ProteinID:
XP_051531561
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All DBs
Position
37:18265872..18290518
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AA seq
566 aa
AA seq
DB search
MDGRLETELYPMGSSYPELDVVHDIAVGTKRGSDELFSCVSSGPYIMSSAANGNDSKKFK
GDIRSPGIPSRVIHVRKLPNDINEAEVISLGLPFGKVTNLLMLKGKNQAFLEMNTEEAAQ
TMVTYYSSVTPVIRNHPIYMQYSNHKELKTDNSPNQVRAQAALQAVNAVQTGSMSIAGVD
PSGMTGPSPVLRVIVENLFYPVTLDVLHQIFSKFGTVLKVITFTKNNQFQTLLQFADGLT
AQHAKLALDGQNIYNGCCTLRISFSKLTSLNVKYNNDKSRDYTRPDLPTGDSQPAIEHHT
MAAFSNSSPGIISAAPYAGAHAFPPAFAIQQAAGLTLSGVPGALASLAIPGAAAAAAAAS
RLGFPALPGSHCVMLVSNLNPERVTPHCLFILFGVYGDVMRVKIMFNKKENALIQMSDGT
QAQLAMSHLNGQKLYGRPLRITLSKHTTVQMPREGHEDQGLTKDYSNSPLHRFKKPGSKN
YSNIFPPSSTLHLSNIPPSVVEDELKMLFATNGALVKNFKFFQKDRKMALIQMGSVDEAI
ESLIQFHNHDLGENHHLRVSFSKSTI
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggacggccgcctagagactgaattgtatcctatgggatcaagttacccagaattagac
gttgttcacgatattgcagttggtacaaagagaggatctgacgagctgttctcctgtgtt
tccagtgggccgtatataatgagctcagcggctaacggcaacgacagcaagaagttcaaa
ggggacatcagaagtcccggcattccgtctagagttatacatgttcgtaagcttcccaat
gacatcaacgaagctgaggtcatctccctgggccttccgttcggcaaagtcaccaatctg
ctcatgctgaagggaaagaatcaggctttcttggaaatgaacacagaagaggcagcacag
acgatggttacttactactcctcagtaacgccagtcatcagaaatcatcccatatacatg
cagtactccaaccacaaagagctgaaaacagacaactccccaaaccaagtgagggcacag
gcagcactgcaggcagtgaatgctgttcagacaggtagcatgtccatagctggtgttgac
ccatcaggtatgaccggtcccagccctgtcttgagggtcattgttgaaaacctcttctac
ccagtgaccctagatgttcttcaccagatcttctccaagtttggcacagtgttaaaggtg
atcaccttcaccaaaaacaatcagtttcaaactctcctgcagtttgcggatggtctcact
gcacaacatgccaagctggccctggatggacagaacatctacaatggctgctgcactctg
cgtatcagtttctccaaactaaccagcctaaatgtgaagtacaataacgacaaaagtcgt
gattacacacggccagacctgcccactggggacagccaacctgctattgagcatcacacc
atggctgcctttagtaactcttctcctggaatcatctctgctgcaccatatgctggagct
cacgcctttccaccagcctttgctatccagcaggctgcagggttgaccctgtctggggtc
cctggagccctggcttcattggccatccctggagcagcggcggccgctgcagctgccagc
agactggggttccccgccctccccggcagccactgtgtcatgctggtcagcaacctgaac
cctgagagagttacgccccactgcctctttattctcttcggtgtatatggggatgtaatg
agagtgaaaatcatgttcaacaagaaggagaatgctctcatacagatgtctgatgggacg
caggcccagctcgcgatgagccatctgaacgggcagaagttatatggcaggcccttgcgt
attaccctgtccaaacacacaactgtccagatgccacgggaaggacatgaggaccagggt
ctcaccaaagactacagcaactctcctcttcatcgcttcaagaaaccaggctccaaaaac
tactccaacatctttcctccctcatccacacttcacctgtctaacatcccaccctcggtt
gttgaggatgaactcaagatgctctttgctaccaatggtgctttggtgaagaacttcaag
ttctttcagaaggatcgcaagatggccctgattcagatgggttcagtggatgaagcaatc
gagtctctgattcagttccacaaccatgacctcggagagaaccaccatcttagggtttcc
ttctccaaatctaccatttga
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