Myxocyprinus asiaticus (Chinese sucker): 127428194
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Entry
127428194 CDS
T08782
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03013
Nucleocytoplasmic transport
masi03015
mRNA surveillance pathway
masi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127428194
09122 Translation
03013 Nucleocytoplasmic transport
127428194
03015 mRNA surveillance pathway
127428194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127428194
03041 Spliceosome [BR:
masi03041
]
127428194
03009 Ribosome biogenesis [BR:
masi03009
]
127428194
03012 Translation factors [BR:
masi03012
]
127428194
Enzymes [BR:
masi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127428194
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127428194
mRNA cycle factors
Stress granule specific factors
127428194
Spliceosome [BR:
masi03041
]
Complex C
Other components
EJC/TREX
127428194
Ribosome biogenesis [BR:
masi03009
]
Eukaryotic type
90S particles
Helicases
127428194
Translation factors [BR:
masi03012
]
Eukaryotic type
Initiation factors
eIF-4
127428194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
AAA_30
TniB
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
127428194
NCBI-ProteinID:
XP_051532328
LinkDB
All DBs
Position
37:complement(41233947..41249548)
Genome browser
AA seq
406 aa
AA seq
DB search
MAAAAAPVRKRLLKEEDMTKIEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQ
QRAIKQIIKGRDVIAQSQSGTGKTATFCISVLQCLDIQVRETQALILAPTRELAGQIQKV
LLALGDYMNVQCHTCIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLV
LDEADEMLNKGFKEQIYDVYRYLPPATQVCLISATLPHEILEMTNKFMTDPIRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVS
SMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI
GRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagccgccgctcccgtgaggaagaggctcctgaaggaggaagacatgacgaag
atcgagtttgagacgagtgaggaggtagatgtgacgccgacgtttgacacgatgggcttg
agggaagatctgctgcgcgggatatacgcctatggttttgagaaaccatcagcgattcag
cagagagccattaaacagatcatcaagggaagagacgtcatcgcacagtctcagtctggt
actggtaaaacagccacattttgtatctcagtgctgcagtgtttggatattcaggttcga
gagactcaagcactgattttggcgccaaccagggagttagcaggacaaatccagaaggtg
ctgctagcgttgggtgactacatgaacgtccaatgtcacacctgtatcggcggcacaaac
gtcggcgaggacatcaggaagctggattacggtcagcacgtggtggctggaacgcccggc
agagtgttcgacatgatccgcagaaggagtttgagaactcgtgccattaagatgctggtg
ttggatgaagcggatgaaatgctcaacaagggttttaaggagcagatttacgatgtgtac
cgatatctgccgcccgccactcaggtgtgtctgataagcgctacactcccgcacgaaatc
ctggagatgaccaacaaattcatgactgaccccatccgcattctggtcaaacgtgatgag
ttgacactggagggcatcaaacagtttttcgtggctgtcgaacgagaggagtggaagttt
gacactctgtgtgacctgtacgacacactcaccattacacaagctgttatcttctgcaac
accaaacgcaaggtggactggctgacagagaagatgagagaagcgaacttcactgtgtcg
tcaatgcacggagacatgccacagaaagagagagaatccatcatgaaagagttcagatct
ggagccagtcgagtgttgatctccacagacgtgtgggccagaggtctggatgttcctcag
gtgtctctaatcatcaactatgatctgcccaacaacagagagttgtacatccacaggatt
ggtcgatcaggtcgatatggcaggaagggtgtggccatcaactttgtgaagaatgacgac
attcgtattctgcgtgatattgagcaatactattccacacagattgatgaaatgcccatg
aacgtggctgacctgatttaa
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