Myxocyprinus asiaticus (Chinese sucker): 127428728
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Entry
127428728 CDS
T08782
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1b isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03082
ATP-dependent chromatin remodeling
masi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127428728
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
127428728
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
masi01009
]
127428728
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
masi03021
]
127428728
03036 Chromosome and associated proteins [BR:
masi03036
]
127428728
Protein phosphatases and associated proteins [BR:
masi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127428728
Transcription machinery [BR:
masi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127428728
SWI/SNF complex
127428728
Chromosome and associated proteins [BR:
masi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
127428728
PBAF complex
127428728
SWI/SNF complex
127428728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
127428728
NCBI-ProteinID:
XP_051533255
LinkDB
All DBs
Position
38:11978468..11995376
Genome browser
AA seq
366 aa
AA seq
DB search
MALSKTFGQKPIKFQLEQDGDFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLASVEERKKI
VASSHATSVTLLKASECEEIFEGNDEKYKAVSISTEPPAFLREQKAKKNSQWVPTLPNSS
HHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENASQAEVLVPIRLDMEIDGQK
LRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLTFVPAIASAIRQQIESYPTDSILDEQTD
QRVIIKLNIHVGNISLVDQFEWDMSEKENSPETFALKLCSELGLGGEFVTTIAYSIRGQL
SWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNTRRMRRLA
NTVPAW
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgagtaaaacatttggacaaaaaccaataaaatttcaactcgagcaagatggg
gacttttatatgataggctccgaggttggcaactacctgcgtatgttcagaggctctctg
tataagcggtacccgtcactatggagacgcctcgcatccgtggaggagaggaagaagatc
gtagcatcatctcacgccaccagtgtgaccctgctcaaggcgtcggagtgtgaggagatc
ttcgaggggaacgatgagaagtacaaggcggtgtccatcagcacagagcctccggcgttt
ctcagggagcagaaggcgaagaagaacagtcaatgggtgcccaccctgcccaacagctcc
catcatctggatgcagtgccttgctccaccacgatcaaccgaaatcgaatgggtcgtgat
aagaagagaacttttccattatgttttgatgaccacgaccctgcagtcatccatgaaaat
gcttcccaagcggaggtcctggtgcccatccgcctagatatggagattgatgggcagaaa
ctcagagacgccttcacctggaacatgaatgagaagcttatgactccagagatgtttgct
gagatcctttgtgatgacctagatctcaatcctctcaccttcgtccctgccatcgcctct
gcaattagacagcagatagagtcctaccccaccgacagtattctggatgagcagacagat
cagagggtcatcatcaagctaaacattcacgtaggcaacatctctctggtggaccagttc
gagtgggacatgtcagagaaggagaactcaccagaaacgtttgctttgaagctctgctct
gagctgggcctcggaggagagtttgtcactaccatcgcctacagcatccgaggacagctc
agctggcaccagaggacgtacgccttcagtgagaaccctttacctaccgtggagattgcc
attcggaacacaggtgatgctgaccagtggtgccctctactggagaccctgacagatgca
gagatggagaagaagatcagagatcaagacagaaacacaagacgtatgcgacgacttgca
aacaccgtccccgcctggtag
DBGET
integrated database retrieval system
