Myxocyprinus asiaticus (Chinese sucker): 127428862
Help
Entry
127428862 CDS
T08782
Name
(RefSeq) TATA box-binding protein-associated factor, RNA polymerase I, subunit C isoform X1
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
masi03021
]
127428862
Transcription machinery [BR:
masi03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
127428862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
Motif
Other DBs
NCBI-GeneID:
127428862
NCBI-ProteinID:
XP_051533463
LinkDB
All DBs
Position
38:complement(5100608..5125417)
Genome browser
AA seq
984 aa
AA seq
DB search
MDSMFPDQLFPHFYLDGPPQAKPKHSLGLGDWGSYERVFERRAGQCVAGRSTQHEFVSQH
AVREEEWVPVKPAVTPLIPPCTDAKASFGPLPDPMDFPEHMQYFYQHYCLDAFSTMGNLL
REDFTFKRNHPKGVKNMSWTKRFLKGLNYKRCQIAHCLKRVRQIHHLVSDVVSDIPPPLL
ANHLHEELTSQREQLQFCSDMTGGVLGYMPLHEAQGSADGCLIYPSGHALETLNFHRVVP
EFNDDKPPNFFMDSSSFAFELNGAIKQLSVGNMEDLGNVGVRSDYFCSSWVLGDNCRPRL
QEVIKSKDRYSCITVSPHVPDELVVANEWGAAYLWTVKKGLQKFREEDSNLYFNAKSPWR
WCEFTCHPRVMVYADRTGAEITDARNRDCYHTLFRIGRTPACLRGERVLLAKYLSESHTH
HHLITSQFSSYIMDERVPCVPMLKWDHMMKSEPVFACSLPALNQSRTCKVLLGSQRSQEV
MLLQYTGGRKHACQTRGPIQKLYSPKESLIHLNHLLPHKRHLAEKRLNVPAAGLTAIQNK
DYLSVFQLTETGDLFFQTLKLHSPVTATNNDLPEPAFSFVDVECTEEPGESENLQSIANG
DNHSDIGVRSPLQLINNVENGLSHAPDTNEDISKEPNGTCSTRPTNPSKDHDLQVAWNEW
FKPIFKKAAGKKRHHHQKVKTTGLIQLKKTKTEKLKQDRLQRLRRDLQEVMKKKEVLLQG
VTNLPHLNVTPVPDPVDPEEWPDDLSQRLTASWEGEWKNWWEEKLGLNREKKIEALHKKR
KTENQARILHRALLSESFTSLVSYQDDLSGYLSAASQSFGSDGESLVNSQAMEEEDGILE
TEMHRKSPIIMRKCFNNQQTLGQVLIESTPKRPQKISGPDQEERFNPQSKQPTRGNSSPL
DSGLCPALVTFTRTPKSQPKLHNEDYLSSLFGSQEPTWQSKQNGGISFSQVPTSSQLSLS
SWSTSQGRTPAQAPQLKKKYRIGF
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atggacagcatgtttccagatcaacttttcccacatttttatctggacggaccgccacaa
gccaagccgaagcacagtctcggactcggagactggggttcatatgagcgagtgtttgaa
agaagggctggacagtgtgttgcgggacgatccacccagcatgagtttgtaagccagcac
gctgtgagagaagaagaatgggtaccagttaaaccagcggttacccctttaattccacca
tgcacagatgccaaagcctcatttggtcctctaccagatccaatggattttccagagcat
atgcagtatttttaccagcattactgtctggatgctttttccacaatgggaaatctgcta
cgggaggatttcacatttaaacgaaatcatccaaagggtgttaagaatatgtcctggact
aagaggttcctgaagggcttgaattataaaagatgccaaattgcacattgcttgaagagg
gtccgtcagattcaccatctggtcagtgatgttgtgagtgatattcctcctcctcttctc
gccaaccacctccatgaggaacttacgtcacagagggaacagctgcagttctgctccgat
atgacagggggtgtgttaggatacatgcccttacatgaggcacagggcagtgctgatggc
tgtctgatttatcccagtggacatgcactggagacactcaacttccacagggtggtgcca
gagttcaatgatgacaagcctcctaatttcttcatggactccagctcttttgcttttgag
ctgaatggagccatcaaacagctcagtgtgggcaacatggaggatctaggtaatgtgggt
gtgcgatcagattatttttgtagctcatgggtattaggtgacaactgcaggccacggttg
caggaagtcatcaagtcgaaggatcgttactcgtgcatcactgtcagtcctcatgttcca
gatgagcttgttgtggccaatgagtggggagctgcctatctttggactgtgaaaaaagga
ttgcagaagtttcgagaggaagattctaatctttatttcaatgccaagtcaccatggcga
tggtgtgagttcacgtgccacccgagagtgatggtgtatgctgacaggacaggggcagag
attacagacgcaaggaatcgtgattgttatcacacactgttccggattggaaggacgcca
gcttgtttgaggggagaaagagtgttactagccaagtacctaagtgaaagccacacccat
caccacctcatcacttcccagttttcctcctacatcatggacgaacgcgttccttgtgtg
ccgatgctgaaatgggatcatatgatgaaatccgagccggtgtttgcctgcagtctgcca
gcactgaaccaaagcagaacctgcaaggtgcttcttggttctcagaggtcacaggaggtc
atgttactgcagtacacaggtgggaggaagcatgcctgtcagactcggggtcccattcag
aagctctatagtcccaaagagagtctgattcacctaaaccatctgctaccccacaagaga
cacctcgctgaaaagagactgaacgtacctgctgcaggtcttacagctatacagaataag
gactacctatccgttttccagctcactgagactggagacctctttttccaaacactgaaa
ctacactcacctgtaactgctaccaacaacgacctcccagaaccagctttttcctttgtc
gatgtggaatgtacagaagaacctggagaaagcgagaacttgcagtccattgcaaacggt
gacaaccatagtgacataggagtgcgtagtccactgcaactaatcaacaatgttgaaaat
ggtctctcccatgctcccgatacaaatgaagatatcagtaaggaacccaatggtacgtgc
tccaccagaccaaccaacccaagtaaagatcatgaccttcaggtagcttggaacgagtgg
tttaagccaattttcaaaaaggctgcaggcaaaaaacgacaccatcatcaaaaagtaaaa
accacaggtttaatacaattgaaaaagaccaagacggaaaaactaaagcaagatcgcctg
cagaggttgaggagagaccttcaagaggtcatgaagaagaaagaggtgctccttcaaggg
gtcacgaacctgcctcacctgaatgtgacccctgttcctgaccctgtagatcctgaagag
tggccagatgatctcagccaacggttgacagcatcgtgggagggcgaatggaagaactgg
tgggaggagaaattgggcctgaaccgggagaagaaaatcgaggctctccataaaaagcgt
aaaacagaaaatcaagccagaattctgcatcgcgccttgctttctgaaagctttacctcg
ttggttagctaccaggatgatctctctggttacttatctgcagctagtcagagtttcggt
tcggacggagagtctttggttaattcgcaagcaatggaagaggaggatggtatattggaa
actgagatgcacagaaagagccccattatcatgagaaagtgtttcaataatcaacagacc
cttgggcaagtactgatcgaatctaccccaaaacgtcctcagaaaatatctgggcctgat
caagaagaacgttttaaccctcagtctaaacaaccaacccgaggcaactcaagtcctttg
gactctggtctttgtcctgcattggtcacctttacacgaacaccaaagagccaaccaaaa
ttgcacaatgaggattaccttagttctttgtttggttcccaagaacctacttggcagtcc
aaacagaatggtggaatttctttctcccaggtacctacctcatcccagctctccttgtca
tcttggagcacttcacaaggcagaacccccgcacaggccccccagctgaagaaaaagtat
cgcataggcttctaa
DBGET
integrated database retrieval system
